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#ifndef DIST_H
#define DIST_H
/*
* dist.h
* Mothur
*
* Created by Sarah Westcott on 5/7/09.
* Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
*
*/
#include "mothur.h"
#include "sequence.hpp"
/**************************************************************************************************/
class Dist {
public:
Dist(){ dist = 0; m = MothurOut::getInstance(); }
Dist(const Dist& d) : dist(d.dist) { m = MothurOut::getInstance(); }
virtual ~Dist() {}
virtual void calcDist(Sequence, Sequence) = 0;
double getDist() { return dist; }
protected:
double dist;
MothurOut* m;
};
/**************************************************************************************************/
#endif
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