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/*
* sharedjabund.cpp
* Dotur
*
* Created by Sarah Westcott on 1/8/09.
* Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
*
*/
#include "sharedjabund.h"
/***********************************************************************/
EstOutput JAbund::getValues(vector<SharedRAbundVector*> shared) {
try {
EstOutput UVest;
UVest.resize(2,0);
data.resize(1,0);
UVest = uv->getUVest(shared);
//UVest[0] is Uest UVest[1] is Vest
data[0] = 1.0-(UVest[0] * UVest[1]) / ((float)(UVest[0] + UVest[1] - (UVest[0] * UVest[1])));
if(data[0] > 1){data[0] = 0; }
if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
return data;
}
catch(exception& e) {
m->errorOut(e, "JAbund", "getValues");
exit(1);
}
}
/***********************************************************************/
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