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#!/usr/bin/make -f
# Sample debian/rules for mothur
# Andreas Tille <tille@debian.org>
# Uncomment this to turn on verbose mode.
#export DH_VERBOSE=1
ARCHBITS ?= $(shell dpkg-architecture -qDEB_BUILD_ARCH_BITS)
THREADS ?= -j3
%:
dh $@
override_dh_auto_build:
if [ $(ARCHBITS) -eq 64 ] ; then \
dh_auto_build -- $(THREADS) 64BIT_VERSION=yes USEMPI=yes && \
mv mothur mothur-mpi && make clean && \
dh_auto_build -- $(THREADS) 64BIT_VERSION=yes USEMPI=no ; \
else \
dh_auto_build -- $(THREADS) 64BIT_VERSION=no USEMPI=yes && \
mv mothur mothur-mpi && make clean && \
dh_auto_build -- $(THREADS) 64BIT_VERSION=no USEMPI=no ; \
fi
override_dh_auto_install:
true
#Cleaning needs help right now
override_dh_auto_clean:
rm -f mothur mothur-mpi *.o mothur.*.logfile
make clean
( cd uchime_src && rm -f *.o mk.stdout mk.stderr tmp.stderr )
# Remark: The following uscan command requires devscripts > 2.12.4 which is not
# yet released at the time of this package release. The code can be obtained
# via
# git clone git://tille@git.debian.org/git/users/tille/devscripts.git
# and then use scripts/uscan.pl
# Alternatively you can use
# . debian/get-orig-source
get-orig-source:
uscan --verbose --force-download --repack --repack-compression xz
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