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/*
* helpcommand.cpp
* Dotur
*
* Created by Sarah Westcott on 1/2/09.
* Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
*
*/
#include "helpcommand.h"
//**********************************************************************************************************************
HelpCommand::HelpCommand(string option) {
validCommands = CommandFactory::getInstance();
}
//**********************************************************************************************************************
int HelpCommand::execute(){
try {
validCommands->printCommands(cout);
m->mothurOut("For more information about a specific command type 'commandName(help)' i.e. 'read.dist(help)'"); m->mothurOutEndLine();
m->mothurOutEndLine(); m->mothurOut("For further assistance please refer to the Mothur manual on our wiki at http://www.mothur.org/wiki, or contact Pat Schloss at mothur.bugs@gmail.com.\n");
return 0;
}
catch(exception& e) {
m->errorOut(e, "HelpCommand", "execute");
exit(1);
}
}
//**********************************************************************************************************************/
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