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#ifndef COLLECT_H
#define COLLECT_H
#include "collectorscurvedata.h"
#include "display.h"
#include "ordervector.hpp"
#include "sabundvector.hpp"
#include "rabundvector.hpp"
#include "sharedordervector.h"
#include "datavector.hpp"
#include "mothurout.h"
/***********************************************************************/
class Collect {
public:
Collect(OrderVector* order, vector<Display*> disp) :
numSeqs(order->getNumSeqs()), order(order), displays(disp), label(order->getLabel()) { m = MothurOut::getInstance(); };
Collect(SharedOrderVector* sharedorder, vector<Display*> disp) :
numSeqs(sharedorder->getNumSeqs()), sharedorder(sharedorder), displays(disp), label(sharedorder->getLabel()) { m = MothurOut::getInstance(); }
~Collect(){ };
int getCurve(float);
int getSharedCurve(float);
private:
SharedOrderVector* sharedorder;
OrderVector* order;
vector<Display*> displays;
int numSeqs, numGroupComb, totalNumSeq;
string label, groupLabel;
void getGroupComb();
vector<string> groupComb;
bool validGroup(vector<string>, string);
MothurOut* m;
};
#endif
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