1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
|
Source: mothur
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>,
Andreas Tille <tille@debian.org>,
Tim Booth <tbooth@ceh.ac.uk>,
Tomasz Buchert <tomasz@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 10),
libreadline-dev,
gfortran,
libopenmpi-dev,
zlib1g-dev,
libboost-iostreams-dev
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/mothur.git
Vcs-Git: https://anonscm.debian.org/git/debian-med/mothur.git
Homepage: http://www.mothur.org
Package: mothur
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends}
Conflicts: uchime
Provides: uchime
Description: sequence analysis suite for research on microbiota
Mothur seeks to develop a single piece of open-source, expandable
software to fill the bioinformatics needs of the microbial ecology
community. It has incorporated the functionality of dotur, sons,
treeclimber, s-libshuff, unifrac, and much more. In addition to improving
the flexibility of these algorithms, a number of other features including
calculators and visualization tools were added.
Package: mothur-mpi
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
mothur,
openmpi-bin
Description: mpi-enabled binary for mothur
Mothur seeks to develop a single piece of open-source, expandable
software to fill the bioinformatics needs of the microbial ecology
community. It has incorporated the functionality of dotur, sons,
treeclimber, s-libshuff, unifrac, and much more. In addition to improving
the flexibility of these algorithms, a number of other features including
calculators and visualization tools were added.
.
Provides the MPI-enabled binary for Mothur
This is recommended for operations like shhh.flows which will be
very slow on a single processor.
|
