File: Ubuntu_18_Build.txt

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mothur 1.44.3-2
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Ubuntu 18

Install dependancies

To use GSL:  		sudo apt-get install lib-gsl-dev
To use Boost: 		sudo apt-get install libboost-all-dev
To use Readline: 	sudo apt-get install libreadline-dev
To use HDF5: 		sudo apt-get install libhdf5-dev

Set locations in makefile

OPTIMIZE ?= yes
USEREADLINE ?= yes
USEBOOST ?= yes
USEHDF5 ?= yes
USEGSL ?= yes
LOGFILE_NAME ?= no
BOOST_LIBRARY_DIR ?= "\"/usr/lib/x86_64-linux-gnu\""
BOOST_INCLUDE_DIR ?= "\"/usr/include/\""
HDF5_LIBRARY_DIR ?= "\"/usr/lib/x86_64-linux-gnu/hdf5/serial\""
HDF5_INCLUDE_DIR ?= "\"/usr/include/hdf5/serial/\""
GSL_LIBRARY_DIR ?= "\"/usr/lib/x86_64-linux-gnu\""
GSL_INCLUDE_DIR ?= "\"/usr/include/\""

make clean 
make