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#ifndef SHAREDJACKKNIFE_H
#define SHAREDJACKKNIFE_H
/*
* sharedjackknife.h
* Mothur
*
* Created by Thomas Ryabin on 3/30/09.
* Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
*
*/
#include "calculator.h"
/*This class implements the SharedJackknife estimator.
It is a child of the calculator class.*/
/***********************************************************************/
class SharedJackknife : public Calculator {
public:
SharedJackknife() : numGroups(-1), callCount(0), count(0), currentCallDone(true), Calculator("sharedjackknife", 3, false) {};
EstOutput getValues(SAbundVector*) {return data;};
EstOutput getValues(vector<SharedRAbundVector*>);
string getCitation() { return "http://www.mothur.org/wiki/Sharedjackknife"; }
private:
int numGroups, callCount, count;
bool currentCallDone;
vector<SharedRAbundVector*> groups;
double simpson(vector<int>, double, int);
double* jackknife();
double getConfLimit(int row, int col);
};
/***********************************************************************/
#endif
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