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#ifndef KNN_H
#define KNN_H
/*
* knn.h
* Mothur
*
* Created by westcott on 11/4/09.
* Copyright 2009 Schloss Lab. All rights reserved.
*
*/
#include "mothur.h"
#include "classify.h"
/**************************************************************************************************/
class Knn : public Classify {
public:
Knn(string, string, string, int, float, float, float, float, int, int, string);
~Knn();
void setDistName(string s);
string getTaxonomy(Sequence*, string&, bool&);
private:
int num;
string findCommonTaxonomy(vector<string>);
string search, outDistName;
};
/**************************************************************************************************/
#endif
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