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#ifndef DLIBSHUFF
#define DLIBSHUFF
/*
* dlibshuff.h
* Mothur
*
* Created by Pat Schloss on 4/8/09.
* Copyright 2009 Patrick D. Schloss. All rights reserved.
*
*/
#include "fullmatrix.h"
#include "libshuff.h"
class DLibshuff : public Libshuff {
public:
DLibshuff(FullMatrix*, int, float, float);
vector<vector<double> > evaluateAll();
float evaluatePair(int, int);
private:
int numDXs;
double dCalculate(int, int);
vector<int> calcN(vector<double>);
};
#endif
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