File: lsrarefaction.hpp

package info (click to toggle)
mothur 1.48.5-2
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 13,676 kB
  • sloc: cpp: 161,854; makefile: 119; sh: 31
file content (38 lines) | stat: -rw-r--r-- 700 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
//
//  lsrarefaction.hpp
//  Mothur
//
//  Created by Sarah Westcott on 5/20/19.
//  Copyright © 2019 Schloss Lab. All rights reserved.
//

#ifndef lsrarefaction_hpp
#define lsrarefaction_hpp

#include "diversityutils.hpp"
#include "diversitycalc.h"

/***********************************************************************/

class LSRarefaction  : public DiversityCalculator  {
    
public:
    
    LSRarefaction(double c);
    
    vector<double> getValues(int ns, vector<mcmcSample>& sampling);
    
    string getTag() { return "ls"; }
    
private:
    
    double coverage;
    
};

/***********************************************************************/




#endif /* lsrarefaction_hpp */