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|
name: ci-cover
on: # yamllint disable-line rule:truthy
workflow_call:
inputs:
py:
description: 'Python version'
required: false
default: 3
type: string
workflow_dispatch:
inputs:
py:
description: 'Python version'
required: true
default: 3
type: string
permissions:
contents: read
env:
MPI4PY_COVERAGE_PLUGIN: cycoverage
PYTHONPATH: ${{ github.workspace }}/conf
jobs:
cover:
runs-on: ubuntu-latest
timeout-minutes: 15
strategy:
fail-fast: false
matrix:
mpi:
- mpich
- openmpi
py:
- ${{ github.event.inputs.py || 3 }}
defaults:
run:
shell: bash -el {0}
steps:
- uses: step-security/harden-runner@v2
with:
egress-policy: audit
- uses: actions/checkout@v5
- uses: mamba-org/setup-micromamba@v2
with:
init-shell: bash
post-cleanup: none
environment-name: cover
create-args: >-
${{ matrix.mpi }}
${{ matrix.mpi }}-mpicc
python=${{ matrix.py }}
pip
setuptools
cython=3.0.12
coverage
numpy
condarc: |
show_channel_urls: true
channel_priority: strict
channels:
- conda-forge
- nodefaults
- run: python -m pip install .
env:
CFLAGS: -O0
CPPFLAGS: -O0 -Wp,-U_FORTIFY_SOURCE
PIP_VERBOSE: 3
PIP_NO_CACHE_DIR: true
PIP_NO_BUILD_ISOLATION: false # pypa/pip#5735
PIP_DISABLE_PIP_VERSION_CHECK: true
- name: Tweak MPI
run: |
openmpi_mca_params=$HOME/.openmpi/mca-params.conf
mkdir -p $(dirname $openmpi_mca_params)
echo plm_ssh_agent=false >> $openmpi_mca_params
echo pml=ob1 >> $openmpi_mca_params
echo btl=tcp,self >> $openmpi_mca_params
echo mpi_yield_when_idle=true >> $openmpi_mca_params
echo btl_base_warn_component_unused=false >> $openmpi_mca_params
prte_mca_params=$HOME/.prte/mca-params.conf
mkdir -p $(dirname $prte_mca_params)
echo rmaps_default_mapping_policy=:oversubscribe >> $prte_mca_params
- name: Run coverage
run: test/coverage.sh
- name: Prepare coverage data
run: mv .coverage .coverage.${TAG}
env:
TAG: ${{ runner.os }}.${{ matrix.mpi }}.py${{ matrix.py }}
- name: Upload coverage data
uses: actions/upload-artifact@v4
with:
name: coverage-data-${{ runner.os }}-${{ matrix.mpi }}-${{ matrix.py }}
path: ".coverage.*"
if-no-files-found: ignore
include-hidden-files: true
report:
runs-on: ubuntu-latest
needs: cover
if: always()
steps:
- uses: step-security/harden-runner@v2
with:
egress-policy: audit
- uses: actions/checkout@v5
- uses: actions/setup-python@v6
with:
python-version: ${{ github.event.inputs.py || 3 }}
cache: pip
cache-dependency-path: |
conf/requirements-build-cython.txt
- run: echo "cython == 3.0.12" > conf/requirements-build-cython.txt
- run: python -m pip install -U pip setuptools
- run: python -m pip install -U -r conf/requirements-build-cython.txt
- run: python -m pip install -U coverage
- run: python setup.py build_src
- name: Download coverage data
uses: actions/download-artifact@v5
with:
pattern: coverage-data-*
merge-multiple: true
- name: Report coverage
run: |
python -m coverage combine
python -m coverage html
python -m coverage xml
python -m coverage report --format=markdown >> $GITHUB_STEP_SUMMARY
python -m coverage report --fail-under=100
- name: Upload HTML report
uses: actions/upload-artifact@v4
with:
name: coverage-html
path: htmlcov
if: failure()
|
