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/// FslNiftiOutputter.cpp
/**
*/
#include <string>
#include <vector>
#include "SeriesHandler.h"
#include "NiftiOutputterBase.h"
#include "FslNiftiOutputter.h"
using namespace jcs;
///
/**
*/
FslNiftiOutputter::FslNiftiOutputter() :
NiftiOutputterBase(CreateOptions())
{
}
///
/**
*/
Options
FslNiftiOutputter::CreateOptions()
{
Options options = Get3DOptions();
options.pathname = "FslNifti";
return options;
}
///
/**
*/
void
FslNiftiOutputter::UpdateOutputForSeries(SeriesHandler* handler)
{
Basic3DOutputter::UpdateOutputForSeries(handler);
}
///
/** Perform the conversion on the given series.
* \param handler A pointer to a SeriesHandler.
* \return Status code.
*/
int
FslNiftiOutputter::ConvertSeries(SeriesHandler* handler)
{
int bits_allocated, pixel_rep = 0;
handler->Find("BitsAllocated", bits_allocated);
handler->Find("PixelRepresentation", pixel_rep);
switch (bits_allocated + pixel_rep) {
case 8 : {
FslNiftiConversion<wxUint8> conversion(this, handler);
conversion.Convert();
break;
}
case 9 : {
FslNiftiConversion<wxInt8> conversion(this, handler);
conversion.Convert();
break;
}
case 16 : {
FslNiftiConversion<wxUint16> conversion(this, handler);
conversion.Convert();
break;
}
case 17 : {
FslNiftiConversion<wxInt16> conversion(this, handler);
conversion.Convert();
break;
}
case 32 : {
FslNiftiConversion<wxUint32> conversion(this, handler);
conversion.Convert();
break;
}
case 33 : {
FslNiftiConversion<wxInt32> conversion(this, handler);
conversion.Convert();
break;
}
default : {
wxLogMessage(_("BitsAllocated and PixelRepresentation values (%d, %d) not supported."), bits_allocated, pixel_rep);
}
}
return 1;
}
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