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/* Copyright (c) 2008-2022 the MRtrix3 contributors.
*
* This Source Code Form is subject to the terms of the Mozilla Public
* License, v. 2.0. If a copy of the MPL was not distributed with this
* file, You can obtain one at http://mozilla.org/MPL/2.0/.
*
* Covered Software is provided under this License on an "as is"
* basis, without warranty of any kind, either expressed, implied, or
* statutory, including, without limitation, warranties that the
* Covered Software is free of defects, merchantable, fit for a
* particular purpose or non-infringing.
* See the Mozilla Public License v. 2.0 for more details.
*
* For more details, see http://www.mrtrix.org/.
*/
#ifndef __mrtrix_ordered_thread_queue_h__
#define __mrtrix_ordered_thread_queue_h__
#include <set>
#include "thread_queue.h"
namespace MR {
namespace Thread {
namespace {
template <class Item>
class __Ordered { MEMALIGN(__Ordered<Item>)
public:
__Ordered () = default;
__Ordered (const Item& item) : item (item) { }
Item item;
size_t index;
};
struct CompareItems { NOMEMALIGN
template <class Item>
bool operator() (const __Ordered<Item>* a, const __Ordered<Item>* b) const { return a->index < b->index; }
};
template <class JobType> struct job_is_single_threaded : std::true_type { NOMEMALIGN };
template <class JobType> struct job_is_single_threaded< __Multi<JobType>> : std::false_type { NOMEMALIGN };
template <class Item> struct __batch_size <__Ordered<__Batch<Item>>> { NOMEMALIGN
__batch_size (const __Ordered<__Batch<Item>>& item) : n (item.item.num) { }
operator size_t () const { return n; }
const size_t n;
};
/***********************************************************************
* Source/Pipe/Sink for UNBATCHED ordered queue *
***********************************************************************/
template <class Item> struct Type<__Ordered<Item>> { NOMEMALIGN
using item = Item;
using queue = Queue<__Ordered<Item>>;
using reader = typename queue::Reader;
using writer = typename queue::Writer;
using read_item = typename reader::Item;
using write_item = typename writer::Item;
};
template <class Item, class Functor>
struct __Source<__Ordered<Item>,Functor> {
MEMALIGN(__Source<__Ordered<Item>,Functor>)
using queued_t = __Ordered<Item>;
using queue_t = typename Type<queued_t>::queue;
using writer_t = typename Type<queued_t>::writer;
using functor_t = typename __job<Functor>::member_type;
writer_t writer;
functor_t func;
size_t batch_size;
__Source (queue_t& queue, Functor& functor, const queued_t& item) :
writer (queue),
func (__job<Functor>::functor (functor)),
batch_size (__batch_size<queued_t> (item)) { }
void execute () {
size_t count = 0;
auto out = writer.placeholder();
do {
if (!func (out->item))
break;
out->index = count++;
} while (out.write());
}
};
template <class Item1, class Functor, class Item2>
struct __Pipe<__Ordered<Item1>,Functor,__Ordered<Item2>> {
MEMALIGN(__Pipe<__Ordered<Item1>,Functor,__Ordered<Item2>>)
using queued1_t = __Ordered<Item1>;
using queued2_t = __Ordered<Item2>;
using queue1_t = typename Type<queued1_t>::queue;
using queue2_t = typename Type<queued2_t>::queue;
using reader_t = typename Type<queued1_t>::reader;
using writer_t = typename Type<queued2_t>::writer;
using functor_t = typename __job<Functor>::member_type;
reader_t reader;
writer_t writer;
functor_t func;
const size_t batch_size;
__Pipe (queue1_t& queue_in, Functor& functor, queue2_t& queue_out, const queued2_t& item2) :
reader (queue_in),
writer (queue_out),
func (__job<Functor>::functor (functor)),
batch_size (__batch_size<queued2_t> (item2)) { }
void execute () {
auto in = reader.placeholder();
auto out = writer.placeholder();
while (in.read()) {
if (!func (in->item, out->item))
break;
out->index = in->index;
out.write();
}
}
};
template <class Item, class Functor>
struct __Sink<__Ordered<Item>,Functor> {
MEMALIGN(__Sink<__Ordered<Item>,Functor>)
using queued_t = __Ordered<Item>;
using queue_t = typename Type<queued_t>::queue;
using reader_t = typename Type<queued_t>::reader;
using functor_t = typename __job<Functor>::member_type;
reader_t reader;
functor_t func;
__Sink (queue_t& queue, Functor& functor) :
reader (queue),
func (__job<Functor>::functor (functor)) { }
void execute () {
size_t expected = 0;
auto in = reader.placeholder();
std::set<queued_t*,CompareItems> buffer;
while (in.read()) {
if (in->index > expected) {
buffer.emplace (in.stash());
continue;
}
if (!func (in->item))
return;
++expected;
while (!buffer.empty() && (*buffer.begin())->index <= expected) {
if (!func ((*buffer.begin())->item))
return;
in.recycle (*buffer.begin());
buffer.erase (buffer.begin());
++expected;
}
}
}
};
/***********************************************************************
* Source/Pipe/Sink for BATCHED ordered queue *
***********************************************************************/
template <class Item> struct Type<__Ordered<__Batch<Item>>> { NOMEMALIGN
using item = Item;
using queue = Queue<__Ordered<vector<Item>>>;
using reader = typename queue::Reader;
using writer = typename queue::Writer;
using read_item = typename reader::Item;
using write_item = typename writer::Item;
};
template <class Item, class Functor>
struct __Source<__Ordered<__Batch<Item>>,Functor> {
MEMALIGN(__Source<__Ordered<__Batch<Item>>,Functor>)
using queued_t = __Ordered<vector<Item>>;
using passed_t = __Ordered<__Batch<Item>>;
using queue_t = typename Type<queued_t>::queue;
using writer_t = typename Type<queued_t>::writer;
using functor_t = typename __job<Functor>::member_type;
writer_t writer;
functor_t func;
size_t batch_size;
__Source (queue_t& queue, Functor& functor, const passed_t& item) :
writer (queue),
func (__job<Functor>::functor (functor)),
batch_size (__batch_size<passed_t> (item)) { }
void execute () {
size_t count = 0;
auto out = writer.placeholder();
bool stop = false;
do {
out->item.resize (batch_size);
for (size_t n = 0; n < batch_size; ++n) {
if (!func (out->item[n])) {
out->item.resize(n);
stop = true;
break;
}
}
out->index = count++;
} while (out.write() && !stop);
}
};
template <class Item1, class Functor, class Item2>
struct __Pipe<__Ordered<__Batch<Item1>>,Functor,__Ordered<__Batch<Item2>>> {
MEMALIGN(__Pipe<__Ordered<__Batch<Item1>>,Functor,__Ordered<__Batch<Item2>>>)
using queued1_t = __Ordered<vector<Item1>>;
using queued2_t = __Ordered<vector<Item2>>;
using passed2_t = __Ordered<__Batch<Item2>>;
using queue1_t = typename Type<queued1_t>::queue;
using queue2_t = typename Type<queued2_t>::queue;
using reader_t = typename Type<queued1_t>::reader;
using writer_t = typename Type<queued2_t>::writer;
using functor_t = typename __job<Functor>::member_type;
reader_t reader;
writer_t writer;
functor_t func;
const size_t batch_size;
__Pipe (queue1_t& queue_in, Functor& functor, queue2_t& queue_out, const passed2_t& item2) :
reader (queue_in),
writer (queue_out),
func (__job<Functor>::functor (functor)),
batch_size (__batch_size<passed2_t> (item2)) { }
void execute () {
auto in = reader.placeholder();
auto out = writer.placeholder();
while (in.read()) {
out->item.resize (in->item.size());
size_t k = 0;
for (size_t n = 0; n < in->item.size(); ++n) {
if (func (in->item[n], out->item[k]))
++k;
}
out->item.resize (k);
out->index = in->index;
if (!out.write())
return;
}
}
};
template <class Item, class Functor>
struct __Sink<__Ordered<__Batch<Item>>,Functor> {
MEMALIGN(__Sink<__Ordered<__Batch<Item>>,Functor>)
using queued_t = __Ordered<vector<Item>>;
using queue_t = typename Type<queued_t>::queue;
using reader_t = typename Type<queued_t>::reader;
using functor_t = typename __job<Functor>::member_type;
reader_t reader;
functor_t func;
__Sink (queue_t& queue, Functor& functor) :
reader (queue),
func (__job<Functor>::functor (functor)) { }
void execute () {
size_t expected = 0;
auto in = reader.placeholder();
std::set<queued_t*,CompareItems> buffer;
while (in.read()) {
if (in->index > expected) {
buffer.emplace (in.stash());
continue;
}
for (size_t n = 0; n < in->item.size(); ++n)
if (!func (in->item[n]))
return;
++expected;
while (!buffer.empty() && (*buffer.begin())->index <= expected) {
for (size_t n = 0; n < (*buffer.begin())->item.size(); ++n)
if (!func ((*buffer.begin())->item[n]))
return;
in.recycle (*buffer.begin());
buffer.erase (buffer.begin());
++expected;
}
}
}
};
}
template <class Source, class Item1, class Pipe, class Item2, class Sink>
inline void run_ordered_queue (
Source&& source,
const Item1& item1,
Pipe&& pipe,
const Item2& item2,
Sink&& sink,
size_t capacity = MRTRIX_QUEUE_DEFAULT_CAPACITY)
{
static_assert (job_is_single_threaded<Source>::value && job_is_single_threaded<Sink>::value,
"run_ordered_queue can only run with single-threaded source & sink");
if (__batch_size<Item1>(item1) != __batch_size<Item2>(item2))
throw Exception ("Thread::run_ordered_queue must be run with matching batch sizes across all stages");
run_queue (
std::move (source),
__Ordered<Item1>(item1),
std::move (pipe),
__Ordered<Item2>(item2),
std::move (sink),
capacity);
}
template <class Source, class Item1, class Pipe1, class Item2, class Pipe2, class Item3, class Sink>
inline void run_ordered_queue (
Source&& source,
const Item1& item1,
Pipe1&& pipe1,
const Item2& item2,
Pipe2&& pipe2,
const Item3& item3,
Sink&& sink,
size_t capacity = MRTRIX_QUEUE_DEFAULT_CAPACITY)
{
static_assert (job_is_single_threaded<Source>::value && job_is_single_threaded<Sink>::value,
"run_ordered_queue can only run with single-threaded source & sink");
if (__batch_size<Item1>(item1) != __batch_size<Item2>(item2) ||
__batch_size<Item1>(item1) != __batch_size<Item3>(item3))
throw Exception ("Thread::run_ordered_queue must be run with matching batch sizes across all stages");
run_queue (
std::move (source),
__Ordered<Item1>(item1),
std::move (pipe1),
__Ordered<Item2>(item2),
std::move (pipe2),
__Ordered<Item3>(item3),
std::move (sink),
capacity);
}
}
}
#endif
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