File: label2mesh.rst

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.. _label2mesh:

label2mesh
===================

Synopsis
--------

Generate meshes from a label image

Usage
--------

::

    label2mesh [ options ]  nodes_in mesh_out

-  *nodes_in*: the input node parcellation image
-  *mesh_out*: the output mesh file

Options
-------

-  **-blocky** generate 'blocky' meshes with precise delineation of voxel edges, rather than the default Marching Cubes approach

Standard options
^^^^^^^^^^^^^^^^

-  **-info** display information messages.

-  **-quiet** do not display information messages or progress status; alternatively, this can be achieved by setting the MRTRIX_QUIET environment variable to a non-empty string.

-  **-debug** display debugging messages.

-  **-force** force overwrite of output files (caution: using the same file as input and output might cause unexpected behaviour).

-  **-nthreads number** use this number of threads in multi-threaded applications (set to 0 to disable multi-threading).

-  **-config key value** *(multiple uses permitted)* temporarily set the value of an MRtrix config file entry.

-  **-help** display this information page and exit.

-  **-version** display version information and exit.

References
^^^^^^^^^^

Tournier, J.-D.; Smith, R. E.; Raffelt, D.; Tabbara, R.; Dhollander, T.; Pietsch, M.; Christiaens, D.; Jeurissen, B.; Yeh, C.-H. & Connelly, A. MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation. NeuroImage, 2019, 202, 116137

--------------



**Author:** Robert E. Smith (robert.smith@florey.edu.au)

**Copyright:** Copyright (c) 2008-2025 the MRtrix3 contributors.

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See the Mozilla Public License v. 2.0 for more details.

For more details, see http://www.mrtrix.org/.