1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237
|
#!/bin/bash
# Copyright (c) 2008-2025 the MRtrix3 contributors.
#
# This Source Code Form is subject to the terms of the Mozilla Public
# License, v. 2.0. If a copy of the MPL was not distributed with this
# file, You can obtain one at http://mozilla.org/MPL/2.0/.
#
# Covered Software is provided under this License on an "as is"
# basis, without warranty of any kind, either expressed, implied, or
# statutory, including, without limitation, warranties that the
# Covered Software is free of defects, merchantable, fit for a
# particular purpose or non-infringing.
# See the Mozilla Public License v. 2.0 for more details.
#
# For more details, see http://www.mrtrix.org/.
# when testing a binary release, you can use the MRTRIX_BINDIR environment
# variable to point to the location of the executables you want to test. You'll
# need to ensure the same commit/tag is checked out on this repo for the
# results to be valid.
if test "$#" -ne 1; then
echo "Script must be provided with single input argument: \"binaries\", \"scripts\", \"units\", or the name of a specific test to be run."
exit 1
fi
if [ -d testing/data/ ]; then
echo -n "Deleting old testing data directory testing/data/"
rm -rf testing/data/
echo OK
fi
datadir=""
testsdir=""
testlist=""
teststring=""
case $1 in
binaries)
datadir="testing/binaries/data/"
testsdir="testing/binaries/tests/"
teststring="binaries"
;;
scripts)
datadir="testing/scripts/data/"
testsdir="testing/scripts/tests/"
teststring="scripts"
;;
units)
testsdir="testing/tests/"
teststring="unit tests"
;;
*)
for item in testing/binaries/tests/* testing/scripts/tests/* testing/tests/*; do
if [[ $(basename $item) == $1 ]]; then
testlist=$item
if [[ $item == testing/binaries/tests/* ]]; then
datadir="testing/binaries/data/"
teststring="binary \""$1"\""
elif [[ $item == testing/scripts/tests/* ]]; then
datadir="testing/scripts/data/"
teststring="script \""$1"\""
else
teststring="unit test \""$1"\""
fi
break
fi
done
if [ -z $testlist ]; then
echo "Unable to find requested test \""$1"\""
exit 1
fi
;;
esac
LOGFILE="testing_"$1".log"
echo logging to \""$LOGFILE"\"
cat > $LOGFILE <<EOD
------------------------------------------
Testing MRtrix3 $teststring
------------------------------------------
EOD
if [ ! -z $datadir ]; then
echo -n "checking for requisite test data... "
git submodule update --init $datadir >> $LOGFILE 2>&1
if [ $? != 0 ]; then
if [[ -e $datadir && ! -z $(ls -A $datadir) ]]; then
echo "Found; UNABLE TO VERIFY VERSION MATCH"
else
echo "ERROR!"
exit 1
fi
else
echo "Synchronized OK"
fi
fi
if [ ! -z $testsdir ]; then
echo -n "building list of tests... "
for item in $testsdir/*; do
testlist="$testlist $(basename $item)"
done
if [ -z "$testlist" ]; then
echo ERROR!
exit 1
fi
echo OK
cat >> $LOGFILE <<EOD
## Tests: ${testlist}
EOD
fi
echo -n "building testing commands... "
cat >> $LOGFILE <<EOD
-------------------------------------------
## building test commands...
EOD
(
cd testing
if [ -z "$PYTHON" ]; then
../build
else
$PYTHON ../build
fi
) >> $LOGFILE 2>&1
if [ $? != 0 ]; then
echo ERROR!
exit 1
else
echo OK
fi
if [[ $datadir == "testing/scripts/data/" && -d "testing/scripts/tmp/" ]]; then
echo -n "Erasing old script test output directory... "
rm -rf testing/scripts/tmp/
echo OK
fi
a_test_has_failed=false
cat >> $LOGFILE <<EOD
PATH is set to $PATH
EOD
if [[ -z "$MRTRIX_BINDIR" ]]; then
MRTRIX_BINDIR="$(pwd)/bin"
else
MRTRIX_BINDIR="${MRTRIX_BINDIR}"
fi
cat >> $LOGFILE <<EOD
Testing executables in: $MRTRIX_BINDIR
EOD
for testitem in $testlist; do
cat >> $LOGFILE <<EOD
-------------------------------------------
## running "${testitem}"...
EOD
echo -n 'running "'${testitem}'"... '
[[ -n "$datadir" ]] && rm -rf $datadir/tmp* $datadir/*-tmp-*
((ntests=0))
((success=0))
while IFS='' read -r cmd || [[ -n "$cmd" ]]; do
cmd="${cmd%\#*}"
[[ -n "$cmd" ]] || continue
echo -n '# command: '$cmd >> $LOGFILE
(
export PATH="$(pwd)/testing/bin:${MRTRIX_BINDIR}:$PATH";
cd $datadir
eval $cmd
) > .__tmp.log 2>&1
if [[ $? -ne 0 ]]; then
echo " [ ERROR ]" >> $LOGFILE
else
echo " [ ok ]" >> $LOGFILE
((success++));
fi
cat .__tmp.log >> $LOGFILE
echo "" >> $LOGFILE
((ntests++))
done < $testsdir$testitem
echo -n $success of $ntests passed
if [[ $success -lt $ntests ]]; then
echo " <-------- ERROR"
a_test_has_failed=true
cat >> $LOGFILE <<EOD
## ERROR: $(($ntests-$success)) tests failed for "${testitem}"
EOD
else
echo ""
cat >> $LOGFILE <<EOD
## $ntests tests completed OK for "${testitem}"
EOD
fi
done
if [[ ! -z $testsdir && ! -z $datadir ]]; then
echo -n "Cleaning up temporary files... "
rm -rf $datadir/tmp* $datadir/*-tmp-*/
echo OK
fi
if [ ${a_test_has_failed} = true ];
then
exit 1
fi
|