File: dwidenoise

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dwidenoise dwi.mif - | testing_diff_image - dwidenoise/denoised.mif -voxel 2e-4
dwidenoise dwi.mif -mask mask.mif - | testing_diff_image - dwidenoise/masked.mif -voxel 2e-4
dwidenoise dwi.mif -extent 3 - | testing_diff_image - dwidenoise/extent3.mif -voxel 2e-4
dwidenoise dwi.mif -extent 5,3,1 - | testing_diff_image - dwidenoise/extent531.mif -voxel 2e-4
dwidenoise dwi.mif -noise tmp-noise.mif - | testing_diff_image - dwidenoise/denoised.mif -voxel 2e-4 && testing_diff_image tmp-noise.mif dwidenoise/noise.mif -image $(mrcalc dwi_mean.mif -abs 2e-4 -mult - | mrfilter - smooth -)
dwidenoise dwi.mif -extent 3 -noise tmp-noise3.mif - | testing_diff_image - dwidenoise/extent3.mif -voxel 2e-4 && testing_diff_image tmp-noise3.mif dwidenoise/noise3.mif -image $(mrcalc dwi_mean.mif -abs 2e-4 -mult - | mrfilter - smooth -)
dwidenoise dwi.mif -estimator Exp1 - | testing_diff_image - dwidenoise/denoised_exp1.mif -voxel 1e-3
dwidenoise dwi.mif -noise tmp-noise-exp1.mif -estimator Exp1 - | testing_diff_image - dwidenoise/denoised_exp1.mif -voxel 1e-3 && testing_diff_image tmp-noise-exp1.mif dwidenoise/noise_exp1.mif -image $(mrcalc dwi_mean.mif -abs 2e-4 -mult - | mrfilter - smooth -)