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---
name: Disambiguate
url: https://github.com/AstraZeneca-NGS/disambiguate
description: >
Disambiguation algorithm for reads aligned to two species (e.g. human and
mouse genomes) from Tophat, Hisat2, STAR or BWA mem.
---
Disambiguation algorithm for reads aligned to two species (e.g. human and mouse
genomes) from Tophat, Hisat2, STAR or BWA mem. Both a Python and C++
implementation are offered.
The MultiQC module for Disambiguate parses the summary files generated by
Disambiguate.
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