File: optitype.md

package info (click to toggle)
multiqc 1.21%2Bdfsg-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 30,164 kB
  • sloc: python: 52,323; javascript: 7,064; sh: 76; makefile: 21
file content (8 lines) | stat: -rw-r--r-- 369 bytes parent folder | download | duplicates (2) 
1
2
3
4
5
6
7
8
 
---
name: OptiType
url: https://github.com/FRED-2/OptiType
description: >
  Precision HLA typing from next-generation sequencing data
---

OptiType is a novel HLA genotyping algorithm based on integer linear programming, capable of producing accurate 4-digit HLA genotyping predictions from NGS data by simultaneously selecting all major and minor HLA Class I alleles.