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---
name: RSEM
url: https://deweylab.github.io/RSEM/
description: >
RSEM (RNA-Seq by Expectation-Maximization) is a software package for
estimating gene and isoform expression levels from RNA-Seq data.
---
The rsem module parses results generated by
[RSEM](https://deweylab.github.io/RSEM/),
a software package for estimating gene and isoform expression levels
from RNA-Seq data
Supported scripts:
- `rsem-calculate-expression`
This module search for the file `.cnt` created by RSEM into directory named `PREFIX.stat`
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