File: mummer1.align

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mummer 3.23%2Bdfsg-8
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file content (5849 lines) | stat: -rw-r--r-- 226,260 bytes
parent folder | download | duplicates (7)
> H_pylori26695_Bslice.fasta  Consistent matches
     183       17     22    none      -      -
     238       72    108    none     33     33
    Errors = 5
T:  taaatttaggtataaaacaccctcaattcaagggtttttgagtgagctttttg
S:  taaatttaggcataaaacgcccttaaatcaagggtttttgagcgagctttttg
              ^       ^    ^  ^               ^          
     347      181     92    none      1      1
    Errors = 1
T:  tagggttttgcgtgggcgtga
S:  tagggttttgtgtgggcgtga
              ^          
     458      292     50    none     19     19
    Errors = 3
T:  ttaaatgcggctcgatgagggcgtcaatttcattgattt
S:  ttaaatgcggttcgatgagagcgtcaatctcattgattt
              ^        ^        ^          
     509      343     35    none      1      1
    Errors = 1
T:  cgaaagcgagttggttgtttt
S:  cgaaagcgagctggttgtttt
              ^          
     545      379     94    none      1      1
    Errors = 1
T:  ctaacatgctagaagcgattt
S:  ctaacatgctggaagcgattt
              ^          
     640      474     25    none      1      1
    Errors = 1
T:  gccattttaacccttgagagt
S:  gccattttaatccttgagagt
              ^          
     666      500     38    none      1      1
    Errors = 1
T:  acaagctcaacaattcaatga
S:  acaagctcaataattcaatga
              ^          
     705      539     44    none      1      1
    Errors = 1
T:  agcccttattgccggctttac
S:  agcccttattaccggctttac
              ^          
     750      584     38    none      1      1
    Errors = 1
T:  caatattgtccgtggtcagca
S:  caatattgtctgtggtcagca
              ^          
     807      641     23    none     19     19
    Errors = 5
T:  tgctgtatttaagcatcgcatgggcaatacccttagtcg
S:  tgctgtattttagcatcgcactagcaatgcccttagtcg
              ^         ^^^     ^          
     834      668     35    none      4      4
    Errors = 2
T:  ccgcgctcacataatcaaaatgcg
S:  ccgcgctcacgtagtcaaaatgcg
              ^  ^          
     870      704     24    none      1      1
    Errors = 1
T:  tgatcgctcccaaaacgcaca
S:  tgatcgctcctaaaacgcaca
              ^          
     921      755     26    none     27     27
    Errors = 3
T:  atcgtatttttcgctctctaataatttgtctaaaataaaaggcaatt
S:  atcgtattttccgctctctaacaatttgtctaaaatcaaaggcaatt
              ^          ^              ^          
     966      800     29    none     19     19
    Errors = 4
T:  ccccaggcaccagcacgatgtctaaaagatcctcatcgc
S:  ccccaggcactagcacgagatctaaaagctcctcatcgc
              ^       ^^        ^          
    1014      848     20    none     19     19
    Errors = 3
T:  ttttaaagcagtccatcgccccttcttgcaatctgtctg
S:  ttttaaagcaatccatcgccccttcttttaatctgtctg
              ^                ^^          
    1035      869     25    none      1      1
    Errors = 1
T:  tgatgatatgattgaagcgcg
S:  tgatgatatggttgaagcgcg
              ^          
    1063      897     91    none      3      3
    Errors = 2
T:  aaaatagcgactctttcattccc
S:  aaaatagcgattttttcattccc
              ^ ^          
    1155      989     61    none      1      1
    Errors = 1
T:  cggttactaattgttctagct
S:  cggttactaagtgttctagct
              ^          
    1235     1069     24    none     19     19
    Errors = 3
T:  ttaggatcaacatgcgtttcagcaaacaacccatcaatc
S:  ttaggatcaatatgcgtttcagcgaacagcccatcaatc
              ^            ^    ^          
    1280     1114    207    none     21     21
    Errors = 4
T:  ccgccgccgcagctctcgctaaaataggggcaaaagagctg
S:  ccgccgccgccgctctgggtaaaatagggggaaaagagctg
              ^     ^ ^           ^          
    1518     1352     53    none     31     31
    Errors = 6
T:  tttgaatgcttttatctctcgttttaagggcctttagaacagaatattgca
S:  tttgaatgctactatcccttgttttaagggcttttagaacggaatattgca
              ^^    ^  ^           ^        ^          
    1581     1415     65    none     10     10
    Errors = 2
T:  tattgacaatagcgttagtctggctcactt
S:  tattgacaatggcgttagtttggctcactt
              ^        ^          
    1650     1484     23    none      4      4
    Errors = 2
T:  aaatatccgccactttggctgcca
S:  aaatatccgctaccttggctgcca
              ^  ^          
    1674     1508     20    none      1      1
    Errors = 1
T:  ttgcttgataactctcatgca
S:  ttgcttgatagctctcatgca
              ^          
    1788     1622     59    none     94     94
    Errors = 7
T:  catcggttaagattttataaccaaattcctctttgatcgtttgtaacatttctaggcctt
S:  catcggttaaaattttataaccaaattcatctttgatagtttgtaacatttctaagcctt
              ^                 ^        ^                ^     
T:  tttctaaaccaggccctctgtaactctctaaactcgtgcggttcgccttatcaa
S:  tttctaaaccaggtcctctgtaactctccaaactcgtgcggttagccttatcaa
                 ^              ^              ^          
    1857     1691     23    none     10     10
    Errors = 3
T:  ctaggggttgcaatttagtggcgatacttc
S:  ctaggggttgtaatttaatagcgatacttc
              ^      ^ ^          
    1881     1715     20    none      1      1
    Errors = 1
T:  gattttctaagctctcaatga
S:  gattttctaaactctcaatga
              ^          
    1952     1786     20    none     51     51
    Errors = 4
T:  cgcatggcccagcgattaaaacggatttaggggtttttgttttagaagttttcatgactt
S:  cgcatggcccggcgattaaaacgggtttaggggtttttgtgttagaagttttcatgactt
              ^             ^               ^                   
T:  ttcctttgttt
S:  atcctttgttt
    ^          
    1973     1807     61    none      1      1
    Errors = 1
T:  aatggtttctccaatcggctc
S:  aatggtttcttcaatcggctc
              ^          
    2035     1869     26    none      1      1
    Errors = 1
T:  tttctatgatgtagtgccaac
S:  tttctatgatatagtgccaac
              ^          
    2077     1911    113    none     16     16
    Errors = 8
T:  tttttaattcattcttgctcgctttctcttgaatga
S:  tttttaattcgttatttattactctttcttgaatga
              ^  ^  ^^ ^^  ^ ^          
    2202     2036     74    none     12     12
    Errors = 2
T:  ggttttttaactcttctttaacaggctctaaa
S:  ggttttttaattcttctttaataggctctaaa
              ^          ^          
    2277     2111     77    none      1      1
    Errors = 1
T:  attaaatgaacgctcccgcaa
S:  attaaatgaatgctcccgcaa
              ^          
    2355     2189     21    none      1      1
    Errors = 1
T:  gcgtattcaatgctcgcaatg
S:  gcgtattcaacgctcgcaatg
              ^          
    2377     2211     24    none      1      1
    Errors = 1
T:  tagaaagggactctttatagc
S:  tagaaagggattctttatagc
              ^          
    2422     2256     22    none     21     21
    Errors = 3
T:  tttaggggggttcacattgcccatgttgcaaatcacataca
S:  tttaggggggatcacattgcccatgttgcggatcacataca
              ^                  ^^          
    2452     2286     32    none      8      8
    Errors = 2
T:  tcgcccggtttggtgccagtgattaaat
S:  tcgcccggttgggtgcctgtgattaaat
              ^      ^          
    2485     2319     61    none      1      1
    Errors = 1
T:  gtgaatccacacaagaaatga
S:  gtgaatccacgcaagaaatga
              ^          
    2547     2381     24    none      1      1
    Errors = 1
T:  agctctttaagctcttcatat
S:  agctctttaaactcttcatat
              ^          
    2572     2406     22    none      1      1
    Errors = 1
T:  tctcttgaaactctaacgctc
S:  tctcttgaaattctaacgctc
              ^          
    2595     2429     27    none      1      1
    Errors = 1
T:  aaaaacgctttcactctttaa
S:  aaaaacgcttccactctttaa
              ^          
    2639     2472     26    none     17     16
    Errors = 7
T:  atctcattttgattaaaattcgtttgt.ttttaaaacg
S:  atctcatttt..ttaaacttggttttcattttaaaacg
              ^^     ^  ^    ^^^          
    2666     2499     73    none      1      1
    Errors = 1
T:  atagctaaaattcttgcattt
S:  atagctaaaaatcttgcattt
              ^          
    2740     2573     44    none      1      1
    Errors = 1
T:  gtgtcgcattggatttagaaa
S:  gtgtcgcattagatttagaaa
              ^          
    2785     2618     23    none      1      1
    Errors = 1
T:  tgcaagaattgaagggcttag
S:  tgcaagaattaaagggcttag
              ^          
    2809     2642     32    none      1      1
    Errors = 1
T:  tatgggctaaggtggggctta
S:  tatgggctaaagtggggctta
              ^          
    2844     2677     29    none      3      3
    Errors = 3
T:  gagacggggctgtttttttagat
S:  gagacggggcgacttttttagat
              ^^^          
    2875     2708     62    none      2      2
    Errors = 2
T:  aagattgatgaaaattttaaga
S:  aagattgatgggaattttaaga
              ^^          
    2938     2771     68    none      1      1
    Errors = 1
T:  caaatgccgcactagaatgcg
S:  caaatgccgcgctagaatgcg
              ^          
    3009     2842     39    none      3      3
    Errors = 3
T:  gcgcgctaacagctttaatgcaa
S:  gcgcgctaaccattttaatgcaa
              ^^^          
    3052     2885     20    none      4      4
    Errors = 2
T:  aacgccccttgattatgggcgtga
S:  aacgccccttaatcatgggcgtga
              ^  ^          
    3073     2906     56    none      1      1
    Errors = 1
T:  gcgctttaaccagctttagcg
S:  gcgctttaacgagctttagcg
              ^          
    3151     2984     73    none     22     22
    Errors = 7
T:  aaactcaagcgattaaattgagtgctatgggtaaagagagcg
S:  aaactcaagcaatcacattaagcgctataggcaaagagagcg
              ^  ^ ^   ^  ^     ^  ^          
    3225     3058     34    none      1      1
    Errors = 1
T:  ttaggtaaggactttttgact
S:  ttaggtaagggctttttgact
              ^          
    3274     3107     62    none     15     15
    Errors = 3
T:  aaggctggatcaaaatgataaagaggatcaagaaa
S:  aaggctggataaaaacgataaagaagatcaagaaa
              ^    ^        ^          
    3337     3170     66    none      1      1
    Errors = 1
T:  ttatcgtggtgggccgcccca
S:  ttatcgtggtaggccgcccca
              ^          
    3455     3287     42    none     52     51
    Errors = 7
T:  ggattgttaaatgcgcgtgttagaaacgattgttgctttaagagagtatcgtaaaagttt
S:  ggattgttaa.tgcgggcgttagaaacgattgctactttaagagaatatcgtaaaagttt
              ^    ^ ^              ^ ^          ^              
T:  ggaagaaagcgt
S:  gaaagaaagcgt
     ^          
    3498     3330     51    none      1      1
    Errors = 1
T:  gctttacacaaagggcatcaa
S:  gctttacacagagggcatcaa
              ^          
    3568     3400     23    none     19     19
    Errors = 3
T:  cccacacgatagtgagcgtttttgtcaatcccacgcaat
S:  cccacacgattgtaagcgtttttgtcaaccccacgcaat
              ^  ^              ^          
    3648     3480     20    none     57     57
    Errors = 6
T:  gggctaacgaagattttaacgcttaccctcgccctttagaaaaggatttggctttatgtg
S:  gggctaacgaggattttagcgcttacccgcgccctttggaaaaggatttggctttgtgtg
              ^       ^         ^        ^                 ^    
T:  aaaaattaggcgttaat
S:  aaaaatcaggcgttaat
          ^          
    3669     3501     34    none      1      1
    Errors = 1
T:  gcggtgtttgtgcctaaaatt
S:  gcggtgtttgcgcctaaaatt
              ^          
    3769     3601     24    none     66     66
    Errors = 13
T:  ctatgaagcagagcaacgcctgaaactctatgctcctaaatttttatctagctctttaga
S:  ctatgaagcaaagcaacgcctaaaactctacgcccctgcatttttatcccactctttaga
              ^          ^        ^  ^   ^^         ^^^         
T:  gggagccatgcgtaaagggcattttg
S:  gggggcggtgcgtaaggggcattttg
       ^  ^^       ^          
    3819     3651     54    none     26     26
    Errors = 6
T:  ggttgttcagatcgtgttaaaaatgtttcatcttgttaatcccact
S:  ggttgttcaggtcgtgttaagattgttccatcttactaatcccact
              ^         ^ ^    ^      ^^          
    3887     3719     40    none     14     14
    Errors = 3
T:  ttttaatcattgagcatttagtcaaagatttgct
S:  ttttaatcatccagcatttagtccaagatttgct
              ^^           ^          
    3947     3779     24    none     20     20
    Errors = 4
T:  catgcgagatcgtgcgcgatgacgataatttggctttaag
S:  catgcgagattgtgcgcgatagcgataatctggctttaag
              ^         ^^       ^          
    4009     3841     26    none     38     38
    Errors = 4
T:  aggaatgtgtatttgaatgccacacaaagaaaacaagccctagccattccaaaagctt
S:  aggaatgtgtgtttgaatgccacagaaagaaaacaagccctagcgatcccaaaagctt
              ^             ^                   ^  ^          
    4047     3879     49    none     12     12
    Errors = 2
T:  aaatccagcaggccatagataagggcgaaaaa
S:  aaatccagcaagccatagataggggcgaaaaa
              ^          ^          
    4105     3937     46    none      9      9
    Errors = 4
T:  tgaaattttagaaaccttggaagtggatt
S:  tgaaattttaaaaaatttagaagtggatt
              ^   ^^  ^          
    4178     4010     46    none     27     27
    Errors = 6
T:  gagcctttaacaatcatagagccaactaacacgctcattttggtggc
S:  gagcctttaaaaaccatagagccggctaacacgctggttttggtggc
              ^  ^         ^^          ^^          
    4243     4075     93    none     19     19
    Errors = 3
T:  tagataatttatgggtgtagtttggaatttttgtggcga
S:  tagataatttgtgggtgtagtttgaaatctttgtggcga
              ^             ^   ^          
    4380     4209     87    none     44     41
    Errors = 8
T:  tttaacgattgactattatttgaaaataaagcgtagaaaatgatttaaaaagcacttggt
S:  tttaacgattaactattatatgaaaa...agcgtaggaaatgatttaaaaagttcttggt
              ^        ^      ^^^       ^               ^^      
T:  ggcg
S:  ggcg
        
    4501     4340     78    none     34     44
    Errors = 14
T:  gctccctatccaaaatccatagcctaaaaatgcatgctt.....ta.gtca....tggtg
S:  gctccctatcaaaaccccatagcctaaaaacgcatgcttgaagctaagtcaaaaatggtg
              ^   ^^              ^        ^^^^^  ^    ^^^^     
T:  gtcg
S:  gtcg
        
    4583     4422     22    none      4      4
    Errors = 2
T:  taagcgaccaaaatattgagataa
S:  taagcgaccacaacattgagataa
              ^  ^          
    4611     4446     85    none      6      2
    Errors = 5
T:  tccaactaaacccgtataaaagagtg
S:  tccaactaaa....tttaaaagagtg
              ^^^^ ^          
    4703     4540    109    none      7      9
    Errors = 4
T:  aaggagccacgatgctca..tggtgaccc
S:  aaggagccactacgctcaaatggtgaccc
              ^ ^     ^^         
    5056     4895     24    none    244    246
    Errors = 50
T:  ttttttttaacgcttgtcaagaataattgagaaatattgcggttttcaaagaaatgacac
S:  ttttttttaatgcttgtcaagaataactgaaaaatattgcggtttttatagaaacgacac
              ^               ^   ^               ^ ^     ^     
T:  gctcttaaaacggcat....aacagcttttgcttaaataaaaaattggttgtgctttaat
S:  gctctcaaaacggcatgggtaacaactattacgct..taaaactttggttgcgctt.aat
         ^          ^^^^    ^  ^  ^ ^^^^^     ^^       ^    ^   
T:  gccataaggatcacaataga.....tgcgtttttgttattggttagtattatttttttgg
S:  gttacaaggatcacaatagacgccatgcgttttaatg.ttggttagcgttagtttt..gg
     ^^ ^               ^^^^^        ^^ ^^        ^^   ^    ^^  
T:  ggttttaaaaaagctttgtttttatcaagatctaacaaatcttattaggatttaatgctt
S:  ggttttaaaaaggctttgtttttcccaagcgctaataaatcttattaggattcaatgctt
               ^           ^^    ^^    ^                ^       
T:  tttttgtttaaaaaatttcattgttaaaaaatg
S:  tttt.gtttaaaaaattccatttttaaaaaatg
        ^            ^    ^          
    5203     5395     28    none    123    476
    Errors = 369
T:  tttgttttattgttttagatcttattttgttataaaacgcattttct......tttattt
S:  tttgttttatcgttttgactctcattttgttgtaaaaattattttctcaagtttttattt
              ^     ^^^   ^        ^     ^^^       ^^^^^^       
T:  ................tattttcttaaagggataggggt.....................
S:  aaaatagtgtaaaacttattctcttaaaga.atagggttttttgaaaccattctccccct
    ^^^^^^^^^^^^^^^^    ^        ^^      ^ ^^^^^^^^^^^^^^^^^^^^^
T:  ........................gaa......tttta........cgcttga.......
S:  tttagccccactaaaccccaaaaagaagcgcttttttaaaagctatcgcttgaattagta
    ^^^^^^^^^^^^^^^^^^^^^^^^   ^^^^^^     ^^^^^^^^       ^^^^^^^
T:  ............................................................
S:  tcaagtttttcactaaccaaatcgtcaaaaacgctaaaaaggattttccatcaaaccccc
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  ............................................................
S:  cccaaaaaaacaaagaatttaaaaacaaagaatttaaaaacaaagaatttaaaaacaaag
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  ............................................................
S:  aatttaaaaacaaagaatttaaaaacaaagaatttaaaaacaaagaatttaaaaacaaag
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  ..............................cccccaaaaaa...gagggtttaaaa.aaa
S:  aatttaaaaacaaggcttcaaaacaaaacccccccaaaaaaaaagagagtttaaaagaaa
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^           ^^^   ^        ^   
T:  ga...........aaggcttcaaaa...........................aaaatc..
S:  gactttaaaaacaaagacttcaaaacaaaaacccccaaaaaaaagagttcaaaaaatcaa
      ^^^^^^^^^^^   ^        ^^^^^^^^^^^^^^^^^^^^^^^^^^^      ^^
T:  ............cctta
S:  aaaaaagaaatccctta
    ^^^^^^^^^^^^     
    5251     5446     26    none     20     23
    Errors = 12
T:  gtttcacaaaaagacagata...ttagtaagcaaacacataat
S:  gtttcacaaagggttttaacgctttagtaagcgaacacataat
              ^^ ^^^^ ^^^^^         ^          
    5284     5479     50    none      7      7
    Errors = 4
T:  acacgctataaagcctgcggtattgga
S:  acacgctatacaatcttcggtattgga
              ^ ^^  ^          
    5431     5626     35    none     97     97
    Errors = 12
T:  tgttgatcgtagggatcttcacgcctagttccacgccatgctgagctacatgatcgctcg
S:  tgttgatcgtggggatcttcacgcctaattccacgccatgctgagccgcatgatcgctcg
              ^                ^                  ^^            
T:  ctttctttttgtttttagcgagattcattctcaagcccaagttgaataagaattgga
S:  cttttttcttattcttagcgaggttcattctcaagcctaaattgaacaagaattgga
        ^  ^  ^  ^        ^              ^  ^     ^          
    5515     5710     47    none     49     49
    Errors = 8
T:  ttttagcgctgtaaaaattattgaatgtcgctaaattcacgtattgagaattaagccacg
S:  ttttagcgctatagaaattattgaaggtcgctaaattcacatactgggaattcagccatg
              ^  ^           ^              ^  ^  ^     ^     ^ 
T:  aagtgccag
S:  aagtgccag
             
    5584     5779     26    none     22     22
    Errors = 4
T:  aagaaatcttattgtttttggtggctttatcgttgataaagt
S:  aagaaatcttgctgtttttggtggttttatcattgataaagt
              ^^            ^      ^          
    5611     5806     26    none      1      1
    Errors = 1
T:  ggacatctgttcctaccccat
S:  ggacatctgtccctaccccat
              ^          
    5656     5851     20    none     19     19
    Errors = 4
T:  acacatcagaggcggagttgaaaaagctggatttgatat
S:  acacatcagaagccgaattgaaaaagctagatttgatat
              ^  ^  ^           ^          
    5716     5911     20    none     40     40
    Errors = 6
T:  aagcatggttgtaatcaaaaaaaccataataccttaacccccatcttcttttttcaccaa
S:  aagcatggttatagtcaaaaaagccgtaataccttaacccccaccttctcttttcaccaa
              ^  ^        ^  ^                 ^     ^          
    5773     5968     23    none     37     37
    Errors = 7
T:  aaaattgtttataccctatttgcacgccgatcccattcatcgcaccgttgttggttt
S:  aaaattgtttgtagcccacttgcacaccgatcccattcatggcaccattgttggttt
              ^  ^  ^ ^      ^              ^     ^          
    5797     5992    152    none      1      1
    Errors = 1
T:  agctgattaagccaacgcgtc
S:  agctgattaatccaacgcgtc
              ^          
    5950     6145     49    none      1      1
    Errors = 1
T:  atggggaattgggcgtgtttg
S:  atggggaattaggcgtgtttg
              ^          
    6002     6197     25    none      3      3
    Errors = 3
T:  ttgtttaaatccttaaggctgcc
S:  ttgtttaaattactaaggctgcc
              ^^^          
    6028     6223     32    none      1      1
    Errors = 1
T:  aatcaagtatcgtgcgcgcca
S:  aatcaagtatggtgcgcgcca
              ^          
    6064     6259     29    none      4      4
    Errors = 2
T:  gcttgatttgatcggcttgagtgc
S:  gcttgatttgctcagcttgagtgc
              ^  ^          
    6103     6298     20    none     10     10
    Errors = 4
T:  caaggctgttatttagggcggttatcgtct
S:  caaggctgttgtttaaagccgttatcgtct
              ^    ^^  ^          
    6124     6319     23    none      1      1
    Errors = 1
T:  cttccacataggcgcaaccgg
S:  cttccacatacgcgcaaccgg
              ^          
    6160     6355     27    none     13     13
    Errors = 4
T:  cccaagtgttagaagtaacccctgcatcaggta
S:  cccaagtgttgttagtaacccccgcatcaggta
              ^^^         ^          
    6221     6416     40    none     34     34
    Errors = 4
T:  acccccattgcggcaagctgccaagtagtttgtgataaattgttttgggatagt
S:  acccccattgtggcaagctgccaagtaatttgtgataaattggcttgggatagt
              ^                ^              ^^          
    6268     6463     79    none      7      7
    Errors = 2
T:  gatcggctagttcaagcatcttggctt
S:  gatcggctagctcaagtatcttggctt
              ^     ^          
    6375     6567     33    none     28     25
    Errors = 6
T:  ttgaaatctttcggcgcgttttgattgctttgcgggttgttaaggctt
S:  ttgaaatcttgcggcgcgttttgattgttttgctggtt...aaggctt
              ^                ^     ^    ^^^       
    6409     6601     32    none      1      1
    Errors = 1
T:  cgatttcttgcgcgtttttga
S:  cgatttcttgggcgtttttga
              ^          
    6442     6634     31    none      1      1
    Errors = 1
T:  cggcgctaaactccgtggcaa
S:  cggcgctaaattccgtggcaa
              ^          
    6523     6715    122    none     50     50
    Errors = 17
T:  acattccctgtcgtatttaaattccacggtgcacccccgtttgagttatgagcggtattt
S:  acattccctgccgtatctaaaccccacggcgcgcccccgttttgtccttgattgtgattg
              ^     ^    ^^      ^  ^         ^^^^^^   ^^ ^^   ^
T:  acccatgggc
S:  acccatgggc
              
    6656     6848     20    none     11     11
    Errors = 2
T:  cattagtttgtgttgttatttttatagttac
S:  cattagtttgcgttgttattgttatagttac
              ^         ^          
    6678     6870     60    none      2      2
    Errors = 2
T:  ttgttttcctttactatccaaa
S:  ttgttttcctgcactatccaaa
              ^^          
    6760     6952     59    none     22     22
    Errors = 3
T:  tttgataagcttgattaagcgttttaaaattgtcaatggata
S:  tttgataagcctgattaagctttttaaaattctcaatggata
              ^         ^          ^          
    6871     7063     29    none     52     52
    Errors = 9
T:  aattaatggatcttgaatcatgtcctggttggccatcaaaaattacgctttgatccccac
S:  aattaatggaacttgaattatgtcctggttggccctcaaaggttacgctttgttgtccac
              ^       ^               ^     ^^          ^ ^^    
T:  tcttaccaggac
S:  tgttaccaggac
     ^          
    6919     7111     62    none     19     19
    Errors = 3
T:  cattataggctatcacattccacagccccaccgccgcat
S:  cattataggcgatgacattccacagccctaccgccgcat
              ^  ^              ^          
    6982     7174     34    none      1      1
    Errors = 1
T:  tttcgccaatcagcccttgcg
S:  tttcgccaattagcccttgcg
              ^          
    7018     7210     38    none      2      2
    Errors = 2
T:  ttatcgatcgtggcattgattt
S:  ttatcgatcgcagcattgattt
              ^^          
    7057     7249    177    none      1      1
    Errors = 1
T:  tcgttaccgcttgattgaggt
S:  tcgttaccgcctgattgaggt
              ^          
    7244     7426     78     -13     10      0
    Errors = 10
T:  gcgatgaagcgagagagagagagagagagagagtaaaagggtt
S:  gcgatgaagcgagagagagagag..........taaaagggtt
                           ^^^^^^^^^^          
    7339     7521     60    none     17     17
    Errors = 2
T:  agaatgtattaaaagcattgtagcataaaatcgtttt
S:  agaatgtattcaaagcattgtagcatgaaatcgtttt
              ^               ^          
    7419     7596     22    none     20     15
    Errors = 6
T:  ttttttgcgcgtttgtttgggtggtattggaaagggtttt
S:  ttttttgcgcttttgtttgggtggta.....aagggtttt
              ^               ^^^^^         
    7442     7619     20    none      1      1
    Errors = 1
T:  gattttgtttcaatggaacgc
S:  gattttgttttaatggaacgc
              ^          
    7499     7682     23    none     37     43
    Errors = 11
T:  taatgataaaagctt......aacagagattttttgctgcgcgtttttaaaagcgagcgg
S:  taatgataaaggcttgattttaacagagatttttgtttgcgcgtttttaaaaacgagcgg
              ^    ^^^^^^             ^^^               ^       
T:  ttt
S:  ttt
       
    7552     7714     43    none     30      9
    Errors = 21
T:  caaataaaaagcaccccccaaaaaaagagattttagaaaggggggatttt
S:  caaataaaaa....cccccaaaa.................gggggatttt
              ^^^^         ^^^^^^^^^^^^^^^^^          
    7625     7780    167    none     30     23
    Errors = 9
T:  actaaaaagcaagggggcttacatcatgccacccatgcctcccataccgc
S:  actaaaaagc.......cttacatcatgccgcccatgccacccataccgc
              ^^^^^^^             ^        ^          
    7793     7948     52    none      1      1
    Errors = 1
T:  ctttaaacatatccacatact
S:  ctttaaacatgtccacatact
              ^          
    7883     8038     74    none     38     38
    Errors = 5
T:  tcgtgtttttctacttcattcacgaccacaccgccatcataaccggcattgatagcga
S:  tcgtgtttttgcacttcattcacgaccacgccaccatcataaccggcgttgatagcga
              ^^                 ^  ^              ^          
    7958     8113     32    none      1      1
    Errors = 1
T:  catcatcgtgcaaattcaaat
S:  catcatcgtgtaaattcaaat
              ^          
    7991     8146     26    none      1      1
    Errors = 1
T:  ccgcgcgaatgagagccgcac
S:  ccgcgcgaataagagccgcac
              ^          
    8030     8185     23    none     13     13
    Errors = 2
T:  caatcacaataccttcttcaacagccgctttag
S:  caatcacaatgccttcttcaaccgccgctttag
              ^           ^          
    8060     8215    161    none      7      7
    Errors = 2
T:  cgctcaacgcatcatcaacccggtctt
S:  cgctcaacgcgtcatccacccggtctt
              ^     ^          
    8230     8385     57    none      9      9
    Errors = 3
T:  ctctgtctttgacatcatggctatggcct
S:  ctctgtctttaacgtcatcgctatggcct
              ^  ^    ^          
    8288     8443     56    none      1      1
    Errors = 1
T:  caatccttccggctttgccta
S:  caatccttccagctttgccta
              ^          
    8348     8503     47    none      4      4
    Errors = 2
T:  attcttcgctaataacttgaccgc
S:  attcttcgctgatgacttgaccgc
              ^  ^          
    8396     8551     65    none      1      1
    Errors = 1
T:  tttcttttcttctgtccccaa
S:  tttcttttctcctgtccccaa
              ^          
    8462     8617    167    none      1      1
    Errors = 1
T:  tattcaccactagagtcgtta
S:  tattcaccaccagagtcgtta
              ^          
    8630     8785     44    none      1      1
    Errors = 1
T:  tctcagcgtttgttacaaaat
S:  tctcagcgttggttacaaaat
              ^          
    8689     8844     48    none     15     15
    Errors = 4
T:  attgcatgccttctacaacatctagttcatcttca
S:  attgcatgccctctacgacatccaattcatcttca
              ^     ^     ^ ^          
    8738     8893    104    none      1      1
    Errors = 1
T:  cgccgtctttacccacttttt
S:  cgccgtctttgcccacttttt
              ^          
    8843     8998     23    none      1      1
    Errors = 1
T:  ccacttttttgctcgcttttt
S:  ccacttttttactcgcttttt
              ^          
    8870     9025     25    none      4      4
    Errors = 2
T:  gctcattaataatggcttcagcgg
S:  gctcattaatgatcgcttcagcgg
              ^  ^          
    8896     9051     33    none      1      1
    Errors = 1
T:  tccatgcctcgtttcacttca
S:  tccatgcctcttttcacttca
              ^          
    8933     9088     38    none      4      4
    Errors = 2
T:  cagccgtgatgttcctcaaacctt
S:  cagccgtgatatttctcaaacctt
              ^  ^          
    8972     9127     23    none      1      1
    Errors = 1
T:  ccagcacggtcgctgtggtcg
S:  ccagcacggttgctgtggtcg
              ^          
    8996     9151     53    none      1      1
    Errors = 1
T:  catcgccggcagcatcagcgg
S:  catcgccggctgcatcagcgg
              ^          
    9050     9205     86    none      1      1
    Errors = 1
T:  ccatgttagctaccgggcaac
S:  ccatgttagccaccgggcaac
              ^          
    9167     9322     34    none     31     31
    Errors = 3
T:  ggatcaacacgttcctgcctcttggccccatggttactttaacagcgtcat
S:  ggatcaacacattcctgcctcttggtcccatggttactttgacagcgtcat
              ^              ^              ^          
    9215     9370    128    none     14     14
    Errors = 2
T:  ccttcaaataaaaggtttctcgcgctatctgaaa
S:  ccttcaaatagaaggtttctcgcactatctgaaa
              ^            ^          
    9344     9499     20    none      1      1
    Errors = 1
T:  ctgtatgacaacaagagcctg
S:  ctgtatgacagcaagagcctg
              ^          
    9365     9520     22    none      1      1
    Errors = 1
T:  agcccacaatgcctagaatgt
S:  agcccacaatacctagaatgt
              ^          
    9388     9543    141    none      1      1
    Errors = 1
T:  tctagttctagcaccatgtat
S:  tctagttctaacaccatgtat
              ^          
    9530     9685     83    none      1      1
    Errors = 1
T:  aaggcttttccttagcgttat
S:  aaggcttttctttagcgttat
              ^          
    9628     9783     53    none     15     15
    Errors = 3
T:  ctcctaatggctgaaacttcatattagttctccta
S:  ctcctaatggttgaaacttcatttcagttctccta
              ^           ^ ^          
    9682     9837     46    none      1      1
    Errors = 1
T:  attgttattaagcgacataac
S:  attgttattacgcgacataac
              ^          
    9747     9902     50    none     19     19
    Errors = 6
T:  agccataaaaacaaagctaataatataactataaggatt
S:  agccataaaaccaaacataagattataattataaggatt
              ^    ^^   ^ ^     ^          
    9838     9993     24    none     41     41
    Errors = 6
T:  tttaaaaatacaaggattagagaaagggg.cgttattaacaaaccttattttaagatttt
S:  tttaaaaatataaggattagaaaaagggggcgttatcaacaaacctt.tttgaagatttt
              ^          ^       ^      ^          ^   ^        
T:  at
S:  at
      
    9894    10050     49    none     32     33
    Errors = 16
T:  tgagtataattcattca.agcgagttaaaacaagaaagcaagatgaagaaagc
S:  tgagtataatcccttttgagaaagtcaaactaaaaagcccatttgaagaaagc
              ^ ^  ^^^  ^^   ^   ^^  ^  ^^ ^ ^^          
    9956    10112     27    none     13     13
    Errors = 2
T:  atcgccttttgcaaacgatagacattgtagaag
S:  atcgccttttacaaacgatagatattgtagaag
              ^           ^          
   10007    10163     57    none     24     24
    Errors = 4
T:  ctcttatgtgaatttgaggaaatcaggttctagctacatggctt
S:  ctcttatgtggatttgaggaaatcaggttcgaattacatggctt
              ^                   ^ ^^          
   10080    10236     58    none     16     16
    Errors = 2
T:  cgtcaatcaaattaaagggttttaccattgctttgg
S:  cgtcaatcaagttaaagggttttactattgctttgg
              ^              ^          
   10139    10295     49    none      1      1
    Errors = 1
T:  cgtttgaaaagctttcgtttg
S:  cgtttgaaaaactttcgtttg
              ^          
   10189    10345    136    none      1      1
    Errors = 1
T:  ttcaatatagttttagagtat
S:  ttcaatatagctttagagtat
              ^          
   10369    10525     42    none     44     44
    Errors = 5
T:  agggcttagcctagagagtatcaaagcgtttaaattaggcttatgcacgaatagaattga
S:  agggcttagcatggagagcatcaaagcgtttaagttaggcttatgcacgaataaaattga
              ^ ^     ^              ^                   ^      
T:  ttac
S:  ttac
        
   10424    10580     23    none     13     13
    Errors = 4
T:  ataaggacaagctcattgaattaggcgtgctag
S:  ataaggacaaattgattgaattgggcgtgctag
              ^^ ^        ^          
   10454    10610     53    none      7      7
    Errors = 4
T:  agagcgataacgatcagaaaacctatt
S:  agagcgataaagaggataaaacctatt
              ^  ^^ ^          
   10508    10664     70    none      1      1
    Errors = 1
T:  atagccctagcgctcaagtgg
S:  atagccctagtgctcaagtgg
              ^          
   10579    10735     21    none      1      1
    Errors = 1
T:  tcgccccaaagtaagcttttt
S:  tcgccccaaaataagcttttt
              ^          
   10601    10757     35    none      1      1
    Errors = 1
T:  ataaatccagtttgctctatg
S:  ataaatccagcttgctctatg
              ^          
   10667    10823    110    none     31     31
    Errors = 3
T:  aagaacacatctataaacaaaagcaagtcattgtaacagaggggtatttgg
S:  aagaacacatttataaacaaaagcaggtcattgtaacagaagggtatttgg
              ^              ^              ^          
   10778    10934     38    none      1      1
    Errors = 1
T:  aaggcgatcccgaaatccttt
S:  aaggcgatccagaaatccttt
              ^          
   10826    10982     20    none     10     10
    Errors = 4
T:  aggcagggcgaaacgcagcctataaagcga
S:  aggcagggcggaatgcggcttataaagcga
              ^  ^  ^  ^          
   10868    11024     26    none     22     22
    Errors = 4
T:  gcttgatgttggctaaagagcaaaggaggggaggggtgattt
S:  gcttgatgttagctaaagagcaaaggaaagggggggtgattt
              ^                ^^  ^          
   10898    11054     21    none      4      4
    Errors = 2
T:  aaaacaacctggatccagcggata
S:  aaaacaacctagacccagcggata
              ^  ^          
   11000    11156     35    none     81     81
    Errors = 11
T:  gatcgctaatggccagattgaaaccttaaaaaattggctatcgcaccccatggcttttat
S:  gatcgctaatcatcagattgaaactttaaaaaattggctatcgcgccccatagctttcat
              ^^^           ^                   ^      ^     ^  
T:  tgagtttgttttaaggcgcatggcggattcctatcttttag
S:  tgaatttgttttaaggcacatggcgggttcttatcttttag
       ^             ^        ^   ^          
   11036    11192     23    none      1      1
    Errors = 1
T:  aagataaggctcttaaagaaa
S:  aagataaggcccttaaagaaa
              ^          
   11060    11216     25    none      1      1
    Errors = 1
T:  tagggtttttaaaaaactttt
S:  tagggtttttgaaaaactttt
              ^          
   11087    11243     23    none      2      2
    Errors = 2
T:  cttttacaaagcgaatacaagc
S:  cttttacaaaatgaatacaagc
              ^^          
   11111    11267     40    none      1      1
    Errors = 1
T:  taatcgctacccttttgcaag
S:  taatcgctacgcttttgcaag
              ^          
   11156    11312     32    none      5      5
    Errors = 2
T:  attagagagcgagtctcttttcagc
S:  attagagagccagtttcttttcagc
              ^   ^          
   11227    11383     27    none     39     39
    Errors = 6
T:  aaacagaaaaacccaatcgccctcaaaggtttgcgcatgtttctagcgcgcccagtttg
S:  aaacagaaaagcctaatcgccctcaaaagttcgcgcatgtttctagcatgcccagtttg
              ^  ^             ^   ^               ^^          
   11306    11462     50    none     52     52
    Errors = 5
T:  tagaaaaattagtgatccgctatcttttagaagacagaagcttgttggatttagcggtgg
S:  tagaaaaattggtgatccgctaccttttagaagacagaagcctattggatttagcggtgg
              ^           ^                  ^ ^                
T:  gctatatccata
S:  gttatatccata
     ^          
   11372    11528    129    none     16     16
    Errors = 2
T:  ttgacgctttgtgtcaagaaaaattagacgacccta
S:  ttgacgctttatgtcaagaaaaattggacgacccta
              ^              ^          
   11508    11664     21    none      7      7
    Errors = 3
T:  ccctaaaagctcgctcccttttagcga
S:  ccctaaaagcccgctttcttttagcga
              ^    ^^          
   11539    11695     54    none     10     10
    Errors = 2
T:  aaaatgatctgtttaaaaaaggctcgccag
S:  aaaatgatctttttaaaaagggctcgccag
              ^        ^          
   11617    11773     68    none     24     24
    Errors = 4
T:  ccatatgaaaaagattaaagctttagccttattcagtggggggt
S:  ccatatgaaacaaataaaagctttagccttatttagtggggggt
              ^ ^  ^                 ^          
   11707    11863     56    none     22     22
    Errors = 3
T:  taaccgctttgcactttaatatagggtttggggggaataaag
S:  taaccgctttacacttcaatatagggtttggagggaataaag
              ^     ^              ^          
   11764    11920     29    none      1      1
    Errors = 1
T:  ttggggctaagctcttggtgt
S:  ttggggctaaactcttggtgt
              ^          
   11794    11950     41    none      1      1
    Errors = 1
T:  gagagcagttttttaacgatg
S:  gagagcagttctttaacgatg
              ^          
   11836    11992     20    none      1      1
    Errors = 1
T:  gctatgggaaatatttcaacc
S:  gctatgggaagtatttcaacc
              ^          
   11857    12013     48    none      1      1
    Errors = 1
T:  cttgcattgactgccatgcca
S:  cttgcattgattgccatgcca
              ^          
   11908    12064    107    none      3      3
    Errors = 2
T:  gcttgaattgaacgcggattttg
S:  gcttgaattggatgcggattttg
              ^ ^          
   12029    12185     20    none     14     14
    Errors = 4
T:  gcgaagaggcgcgttttgatcccgttttagaccg
S:  gcgaagaggctcgttttgatcttattttagaccg
              ^          ^^^          
   12091    12247     49    none     42     42
    Errors = 10
T:  aacgcaagcaggtggtaaaaaaccgcaatttttagatgagttgttattgcgacccatgag
S:  aacgcaagcaagcggtgaaaaaccgcaatttttagacgaattgctcttaaggcccatgag
              ^ ^   ^                   ^  ^   ^ ^  ^^ ^        
T:  cg
S:  cg
      
   12151    12307     32    none     11     11
    Errors = 3
T:  aaaaagggttttgttgatagagaaaagcttt
S:  aaaaagggttgggttgatagggaaaagcttt
              ^^        ^          
   12187    12343     56    none      4      4
    Errors = 4
T:  gtagggggcgaagcaggcaattgc
S:  gtagggggcgtgctaggcaattgc
              ^^^^          
   12274    12430     47    none     31     31
    Errors = 4
T:  agccaggtggagggtgtttgcttacagacattcaagtgagcaataagatta
S:  agccaggtggggggtgcttgcttacggacattcaagtgagtaataagatta
              ^     ^        ^              ^          
   12323    12479     32    none      2      2
    Errors = 2
T:  tgtttgaagacagcgtgattgt
S:  tgtttgaagatggcgtgattgt
              ^^          
   12373    12529     38    none     18     18
    Errors = 2
T:  ttattttgtcttaccccataacgctcgcttggtggtgg
S:  ttattttgtcctaccccataacgctcgtttggtggtgg
              ^                ^          
   12419    12575     28    none      8      8
    Errors = 3
T:  accataaattggatattcaacacccctt
S:  accataaattagacattgaacacccctt
              ^  ^   ^          
   12463    12619     26    none     16     16
    Errors = 4
T:  agattgaattactaaactgtaaaggccctttgagtt
S:  agattgaattgctaggctgtaaaggtcctttgagtt
              ^   ^^         ^          
   12517    12673     60    none     28     28
    Errors = 4
T:  ataaaaacgctagcaaagaagataaagaattagccggccgtatcgctt
S:  ataaaaacgccagccaagaagataaagaattggccggtcgtatcgctt
              ^   ^                ^     ^          
   12592    12748     32    none     15     15
    Errors = 2
T:  tcaaataggggatgaaaagcgcgagctttaccctt
S:  tcaaatagggaatgaaaagcgcgaactttaccctt
              ^             ^          
   12625    12781     20    none      1      1
    Errors = 1
T:  acgctagggaatatttgttcg
S:  acgctagggagtatttgttcg
              ^          
   12657    12814    188    none     12     13
    Errors = 3
T:  cttgaaaggg.agtttttgagggttttaggggt
S:  cttgaaaggggagtttttgagaattttaggggt
              ^          ^^          
   12878    13035     21    none     33     33
    Errors = 5
T:  ccctaaggggctattccctttttatatcccctatgaaaattgttatttggggc
S:  ccctaaggggttgttccctttttatatcccgtatgagaattgctatttggggc
              ^ ^                 ^     ^     ^          
   12900    13057     30    none      1      1
    Errors = 1
T:  ttgttgcattgataaccataa
S:  ttgttgcattaataaccataa
              ^          
   12931    13088     54    none      1      1
    Errors = 1
T:  cctagtgatctagatttaagg
S:  cctagtgatccagatttaagg
              ^          
   13013    13170     50    none     28     28
    Errors = 5
T:  atgttaaatacgatgaaaaacatttggttgcaaagctcgtgcctaatt
S:  atgttaaatatgatgaaaaacatttggtaaccaagcttgtgcctaatt
              ^                 ^^ ^     ^          
   13073    13230     26    none     10     10
    Errors = 3
T:  gcaatttagacgccgcaaaactctcccaaa
S:  gcaatttagaagccacaaagctctcccaaa
              ^   ^    ^          
   13100    13257     29    none      1      1
    Errors = 1
T:  atttttcaccggcttctaaag
S:  atttttcaccagcttctaaag
              ^          
   13130    13287     38    none      1      1
    Errors = 1
T:  agaaattgcccattgacaggt
S:  agaaattgcctattgacaggt
              ^          
   13169    13326     24    none      1      1
    Errors = 1
T:  gtaacaatttctctatcgcgt
S:  gtaacaatttttctatcgcgt
              ^          
   13211    13368     62    none     18     18
    Errors = 3
T:  tttgaaatacaataatgtttggcacatttatggggaaa
S:  tttgaaatacgacaatgtttggcacatctatggggaaa
              ^ ^              ^          
   13284    13441     22    none     11     11
    Errors = 3
T:  tagattggattaaagaccaattaaaccacca
S:  tagattggatcaaaaaccaactaaaccacca
              ^   ^     ^          
   13307    13464     44    none      1      1
    Errors = 1
T:  aagatggcgactctttagagg
S:  aagatggcgattctttagagg
              ^          
   13373    13530     41    none     22     22
    Errors = 4
T:  ataatttccccactaaaatgatttttgcaataggggctaccc
S:  ataatttccctaccaaaatgatttttgcgattggggctaccc
              ^  ^              ^  ^          
   13415    13572     23    none      1      1
    Errors = 1
T:  agcattttttgcaaaaaggcg
S:  agcattttttacaaaaaggcg
              ^          
   13439    13596     23    none      1      1
    Errors = 1
T:  aggtggtgatcgttgcttaca
S:  aggtggtgattgttgcttaca
              ^          
   13463    13620     45    none      1      1
    Errors = 1
T:  atttacaatacagttttgaaa
S:  atttacaatatagttttgaaa
              ^          
   13509    13666     43    none      1      1
    Errors = 1
T:  cgccctacaagccaaagaaca
S:  cgccctacaaaccaaagaaca
              ^          
   13590    13747     70    none     38     38
    Errors = 7
T:  aaatcgtagaatagtaaggcttttacactctttggctttgcttttttaccc.ttttaaa
S:  aaatcgtagagtagtaaggctttttt.ctcttcagctttgcttttttaccccttttaaa
              ^             ^^^     ^^                 ^       
   13670    13827     21    none     10     10
    Errors = 4
T:  ttgagataataaagacttataaagttaatt
S:  ttgagataattaaaccttagaaagttaatt
              ^  ^^    ^          
   13700    13857     91    none      9      9
    Errors = 2
T:  aaattaaacagaagggttttgatgtccgc
S:  aaattaaacaaaagggttatgatgtccgc
              ^       ^          
   13792    13949     80    none      1      1
    Errors = 1
T:  tttttaacgccctagaagccc
S:  tttttaacgctctagaagccc
              ^          
   13897    14054     50    none     25     25
    Errors = 3
T:  atgtgtggaggaatttggaccggtggaaagagatcttattcacga
S:  atgtgtggagaaatttagaccggtggaaagagattttattcacga
              ^     ^                 ^          
   13995    14152     65    none     48     48
    Errors = 4
T:  tctttaaagctccgagtttagcgaattggtttatgggaattttttaatgattatcctgtc
S:  tctttaaagccccgagtttggcgaattggtttatgggagttttttaatgattatcctctc
              ^        ^                  ^                  ^  
T:  agcgagcg
S:  agcgagcg
            
   14073    14230     20    none     13     13
    Errors = 2
T:  tgaacgctaagtcttatttgatttctgtttttg
S:  tgaacgctaaatcttatttgatctctgtttttg
              ^           ^          
   14094    14251     20    none      1      1
    Errors = 1
T:  cgccttttatcttgctccctt
S:  cgccttttattttgctccctt
              ^          
   14115    14272     35    none      1      1
    Errors = 1
T:  ggattgatttgttgagcgctt
S:  ggattgatttattgagcgctt
              ^          
   14151    14308     32    none      1      1
    Errors = 1
T:  ggtttttagcgctctttagcg
S:  ggtttttagcactctttagcg
              ^          
   14202    14359     45    none     19     19
    Errors = 4
T:  ttgatgaagacattgcagatattatcgtggctaaaagca
S:  ttgatgaagatattgcagatattattatcgctaaaagca
              ^              ^^ ^          
   14248    14405     35    none      1      1
    Errors = 1
T:  tagagcgtagaatgttagaaa
S:  tagagcgtaggatgttagaaa
              ^          
   14284    14441     86    none      1      1
    Errors = 1
T:  tcaaacaaaaggtttcaaact
S:  tcaaacaaaaagtttcaaact
              ^          
   14371    14528     44    none      1      1
    Errors = 1
T:  atgagcatttcttgctcacta
S:  atgagcattttttgctcacta
              ^          
   14416    14573     50    none      1      1
    Errors = 1
T:  tccgtttagaaggggttagct
S:  tccgtttagagggggttagct
              ^          
   14485    14642     26    none     19     19
    Errors = 3
T:  atcttttcaccgagcgccagatggcgttggattctttag
S:  atcttttcactgagcgccaaatggcgttagattctttag
              ^        ^        ^          
   14512    14669     27    none      1      1
    Errors = 1
T:  tcgtggcgcgccttgtggtta
S:  tcgtggcgcgtcttgtggtta
              ^          
   14563    14720     20    none     24     24
    Errors = 5
T:  taaaattgatcaccaacaaaacattcaatctgattctcaatact
S:  taaaattgattataaacaaagcattcaatctgactctcaatact
              ^ ^^      ^            ^          
   14617    14774     69    none     34     34
    Errors = 4
T:  tgcaagcgattttgaatcaatttgaaaacaaagaagtgtatgaaaatcagtatt
S:  tgcaagcgatcttgaatcagtttgaaaataaagaagtgtatgagaatcagtatt
              ^        ^        ^              ^          
   14704    14861     80    none     18     18
    Errors = 3
T:  gaaaaaatctctcatgcatgctaatagggaaaatttta
S:  gaaaaaatctttcatgcacgctaatagagaaaatttta
              ^       ^        ^          
   14809    14966     23    none     25     25
    Errors = 3
T:  agctcaaaaattatgcccccaaactcttaagctccaaagaggttt
S:  agctcaaaaactatgcccccaaactcttaaactctaaagaggttt
              ^                   ^   ^          
   14870    15027     94    none     38     38
    Errors = 5
T:  atttttatgcggaatacattaatgggtttgatctccccttaaaacccttagtaggggg
S:  atttttatgcagaatatattaatgggtttgaactccctttaaaacccctagtaggggg
              ^     ^              ^     ^         ^          
   14965    15122     54    none      1      1
    Errors = 1
T:  aaaaaacctacaaccgcttga
S:  aaaaaacctataaccgcttga
              ^          
   15022    15179     20    none      3      3
    Errors = 2
T:  ttctatagcgatcggagcgcttt
S:  ttctatagcggtgggagcgcttt
              ^ ^          
   15086    15243     46    none     44     44
    Errors = 7
T:  tataccaagaaacgcctttagatattatcttctctatagagcctatgagtgtgcataaaa
S:  tataccaagagacgcctttggatattatcttttccatagagcctatgagcgtcaataaaa
              ^        ^           ^  ^              ^  ^^      
T:  cgct
S:  cgct
        
   15139    15296     30    none      7      7
    Errors = 2
T:  ttagcatgtccaatctcgttaaaaacg
S:  ttagcatgtctaatcttgttaaaaacg
              ^     ^          
   15188    15345     26    none     19     19
    Errors = 4
T:  ataccaagaactggtcaaaaccaaacgcctatccatgca
S:  ataccaagaattagtcaaaaccaaacgattatccatgca
              ^ ^              ^^          
   15266    15423     25    none     52     52
    Errors = 7
T:  cgccctaaacattcttatcaaagcccctagtttagagaatttagacgctcaaacaagctt
S:  cgccctaaacgttcttatcaaagcccccagtttggaggatttagacgctcaaaccagctt
              ^                ^     ^   ^                ^     
T:  ggttttagggct
S:  aattttagggct
    ^^          
   15292    15449     32    none      1      1
    Errors = 1
T:  ttaaagaaaatttagtgggcg
S:  ttaaagaaaacttagtgggcg
              ^          
   15325    15482     35    none      1      1
    Errors = 1
T:  ttggcttgaagggggggtatt
S:  ttggcttgaaaggggggtatt
              ^          
   15361    15518     36    none      1      1
    Errors = 1
T:  aacgcatccacttaaaccacc
S:  aacgcatccatttaaaccacc
              ^          
   15409    15566    125    none     12     12
    Errors = 2
T:  ctctaaagccttagcgtgtttaatggtgtttg
S:  ctctaaagccctagcgtgtttgatggtgtttg
              ^          ^          
   15553    15710     24    none     19     19
    Errors = 4
T:  aagtgagccacaagaacgccaaagaaatcgccagagtga
S:  aagtgagccataataacgctaaagaaattgccagagtga
              ^  ^     ^        ^          
   15595    15752     25    none     18     18
    Errors = 5
T:  gcatactttaatcataggggctactgggagcggtaaaa
S:  gcatactttagttataggggcaaccggaagcggtaaaa
              ^ ^        ^  ^  ^          
   15640    15797     32    none     20     20
    Errors = 2
T:  ctgattagctttttaatgatgagcgctttgaaataccaaa
S:  ctgattagctatttaatgatgagcgctttaaaataccaaa
              ^                  ^          
   15701    15858     40    none     29     29
    Errors = 5
T:  tagcttttgataggatgcaggggctgtattctttcacaaaattttttaa
S:  tagcttttgacaggatgcaagggttgtattctttcaccgaattttttaa
              ^        ^   ^             ^^          
   15742    15899     36    none      1      1
    Errors = 1
T:  aatcttttagcatcaacccct
S:  aatcttttagtatcaacccct
              ^          
   15814    15971     32    none     36     36
    Errors = 3
T:  tttgcagaatctagaatttttgcaatccttctttttgagcatgtttgatcttgccc
S:  tttgcagaatttagaatttttgcaatccttttttttgagcatgttggatcttgccc
              ^                   ^              ^          
   15869    16026     34    none     23     23
    Errors = 3
T:  aagaagccttggaagatatgaatgcgatttctagcgcgattaa
S:  aagaagccttagaagacatgaatgcgatttctggcgcgattaa
              ^     ^               ^          
   15925    16082     23    none     22     22
    Errors = 4
T:  ccttataccctaaagcttttagtttgctagactttaaagaaa
S:  ccttataccccaaagattttagtttgctggattttaaagaaa
              ^    ^            ^  ^          
   15967    16124     50    none     19     19
    Errors = 2
T:  ttaaaagaacttcatctaaccaattgggtttgagtttag
S:  ttaaaagaacctcatctaaccaattgggcttgagtttag
              ^                 ^          
   16018    16175     38    none      1      1
    Errors = 1
T:  ctttgaatgatgcgttcaact
S:  ctttgaatgacgcgttcaact
              ^          
   16075    16232     29    none     19     19
    Errors = 4
T:  tgataaacctggatactatcacccaaaatcctaaagact
S:  tgataaacctagatgcgatcacccaaaaccctaaagact
              ^   ^ ^           ^          
   16132    16289     38    none     28     28
    Errors = 4
T:  tagcctattatttgttttataaaatcttagaagaatccaggaaaaacg
S:  tagcctattacttgttttataagatcttagaagagtctaggaaaaacg
              ^           ^           ^  ^          
   16171    16328     26    none      1      1
    Errors = 1
T:  ttttagacgagtttaaatcct
S:  ttttagacgaatttaaatcct
              ^          
   16201    16358     35    none      4      4
    Errors = 2
T:  aaaacgatttattgaacactaaaa
S:  aaaacgatttgttaaacactaaaa
              ^  ^          
   16237    16394     35    none      1      1
    Errors = 1
T:  cgcaagccagaaaagctaatg
S:  cgcaagccaggaaagctaatg
              ^          
   16303    16460     38    none     31     31
    Errors = 4
T:  ccttgcaagatatttaccaattaagcggggttaaaaacgctcatagttttt
S:  ccttgcaagacatttaccaacttagcggggttaaaaacgcccatagttttt
              ^         ^ ^                 ^          
   16342    16499     20    none      1      1
    Errors = 1
T:  tcattttgtacccgcaaaaaa
S:  tcattttgtatccgcaaaaaa
              ^          
   16363    16520     63    none      1      1
    Errors = 1
T:  acgctagggagttgaaacaca
S:  acgctagggaattgaaacaca
              ^          
   16427    16584     43    none      1      1
    Errors = 1
T:  aaacacccctttgtatgccag
S:  aaacacccctctgtatgccag
              ^          
   16474    16631     24    none      4      4
    Errors = 2
T:  gtaacgggagctctaacatgattg
S:  gtaacgggagttccaacatgattg
              ^  ^          
   16508    16665     22    none     10     10
    Errors = 3
T:  gagtttggagagtttggggcgttatttgaa
S:  gagtttggagggcttggggtgttatttgaa
              ^ ^      ^          
   16548    16705     42    none     18     18
    Errors = 5
T:  tctttaattcggattctagccatgtgagtaaagtgaaa
S:  tctttaattcagattccagtcatgtcaataaagtgaaa
              ^     ^  ^     ^ ^          
   16653    16795     83    none     63     48
    Errors = 23
T:  cagagtggcgcgagaaacttttgaggagctagttttaaaaagttagttttgttttaaaaa
S:  cagagtggcgtgagaaacttttgaagagttagttt.aaaaagtcagtttc..........
              ^             ^   ^      ^       ^     ^^^^^^^^^^^
T:  gttaatactattttgaagcactc
S:  ...aata.tcgtgtgaagcactc
    ^^^    ^ ^^ ^          
   16786    16928     42    none     50     50
    Errors = 5
T:  ttaccctaaaatcctattgcataggtctaaataagagcttagggatcattttagccataa
S:  ttaccctaaagtcctattgcataggtccaaataagagcttggggatcattttaaccatag
              ^                ^            ^            ^     ^
T:  aaagcttatg
S:  aaagcttatg
              
   16847    16992    162    none     19     22
    Errors = 7
T:  acgctcaaat.agtcaagcaaaaaa..atatcaattaaaagg
S:  acgctcaaattagtcaagcaaacaagcaaaaaaattaaaagg
              ^           ^  ^^ ^ ^^          
   17010    17155     59    none      1      1
    Errors = 1
T:  aacaattcactaagaaaaaaa
S:  aacaattcacgaagaaaaaaa
              ^          
   17100    17245     29    none     31     31
    Errors = 5
T:  ctttatacgccagagattaccagacttctttaggggtattagatcaagccg
S:  ctttatacgcaagggattataagacttctttaggggtattggatcaagccg
              ^  ^     ^^                   ^          
   17142    17287     47    none     13     13
    Errors = 2
T:  ttgataaaacgcaaagcgcttttacaagagggg
S:  ttgataaaacccaaagcgctttcacaagagggg
              ^           ^          
   17190    17335    107    none      1      1
    Errors = 1
T:  atgataatgtgcgcgcttatg
S:  atgataatgtacgcgcttatg
              ^          
   17313    17458     50    none     16     16
    Errors = 3
T:  aattcaaccgtgcgaacgaacgccagcgcagggcta
S:  aattcaaccgcgcgaatgaacgccaacgcagggcta
              ^     ^        ^          
   17364    17509     46    none      1      1
    Errors = 1
T:  ccattaaagagatcgattcta
S:  ccattaaagaaatcgattcta
              ^          
   17412    17557     59    none      2      2
    Errors = 2
T:  cgctctagggtggaagtgagcg
S:  cgctctagggcagaagtgagcg
              ^^          
   17478    17623     23    none      7      7
    Errors = 2
T:  aagcttatcagggcttacttaacccgg
S:  aagcttatcaaggcttgcttaacccgg
              ^     ^          
   17502    17647     30    none      1      1
    Errors = 1
T:  tttcgtatctctcagggttgt
S:  tttcgtatctttcagggttgt
              ^          
   17533    17678     55    none      1      1
    Errors = 1
T:  aaatggggatgagaataaggg
S:  aaatggggataagaataaggg
              ^          
   17595    17740    116    none      7      7
    Errors = 3
T:  aaagcccttttgtagcccaagacttgg
S:  aaagccctttcgtggctcaagacttgg
              ^  ^  ^          
   17712    17857     20    none      1      1
    Errors = 1
T:  tttttatgatcgattcggttt
S:  tttttatgattgattcggttt
              ^          
   17736    17881     47    none      4      4
    Errors = 3
T:  ataacgtgagtatagccttgccca
S:  ataacgtgagcgtggccttgccca
              ^^ ^          
   17808    17953     56    none     25     25
    Errors = 4
T:  aaaatttcactctcaaagatggagaaaaagtaacgccctttgaca
S:  aaaatttcaccctcaaggacggagaaaaagtaacaccctttgaca
              ^     ^  ^              ^          
   17865    18010     77    none      1      1
    Errors = 1
T:  tcaggaagcagttgccctaca
S:  tcaggaagcaattgccctaca
              ^          
   17970    18115     32    none     28     28
    Errors = 3
T:  actattatttggggtttgttggagggttagtaacttccttgtattcag
S:  actattatttagggtttgttggcgggttagtaacttcgttgtattcag
              ^           ^              ^          
   18008    18153     39    none      6      6
    Errors = 2
T:  ttgcagacactagaagcacgagcatt
S:  ttgcagacaccagaaacacgagcatt
              ^    ^          
   18048    18193    125    none      1      1
    Errors = 1
T:  tcatgcgcattaaaaacaaag
S:  tcatgcgcatcaaaaacaaag
              ^          
   18196    18341     31    none     23     23
    Errors = 3
T:  aattgctttctgggtttgtagcagccccacaaatcttttgctc
S:  aattgctttcagggtttgtaacagccccacaagtcttttgctc
              ^         ^           ^          
   18237    18382     25    none     10     10
    Errors = 2
T:  atattttatacgtgcgcagttttaaaaacg
S:  atattttatatgtgcgcagctttaaaaacg
              ^        ^          
   18296    18440     31    none     34     33
    Errors = 6
T:  gttttgagtcgtttaaaatgatttcaaaacccccaccaaaggaatttt.agtttt
S:  gttttgagtcatttaaaatgattccaaaaccccc..caaagaaatttttagtttt
              ^            ^          ^^     ^      ^      
   18328    18472     93    none      1      1
    Errors = 1
T:  ggcattaaacgcaaacacgat
S:  ggcattaaacacaaacacgat
              ^          
   18440    18584     53    none     19     19
    Errors = 2
T:  ttacgagtttgcataaaaataacgagttacaattgttgt
S:  ttacgagtttacataaaaataacgagttgcaattgttgt
              ^                 ^          
   18494    18638     41    none      1      1
    Errors = 1
T:  cggtcaatgtttttaagatcc
S:  cggtcaatgtctttaagatcc
              ^          
   18536    18680     35    none      1      1
    Errors = 1
T:  gcaatctcaccatcattagcc
S:  gcaatctcactatcattagcc
              ^          
   18611    18755     35    none     40     40
    Errors = 6
T:  tcgttgaggggctaatcattataagagaactcaccattcccttgattgatatgaaaaaat
S:  tcgttgagggcttgatcattataagagagctcaccattcctttgattgacatgaaaaaat
              ^^ ^              ^           ^        ^          
   18668    18812     26    none     22     22
    Errors = 3
T:  gccaaaacaaaaacaaggatttacgcccttataggatagaaa
S:  gccaaaacaagagcaaggatttacgcccttacaggatagaaa
              ^ ^                  ^          
   18704    18848     26    none     10     10
    Errors = 2
T:  aaggcgaagatgatattgttatgatttgtg
S:  aaggcgaagacgatattgtcatgatttgtg
              ^        ^          
   18731    18875     86    none      1      1
    Errors = 1
T:  ctcgctggactataggggtta
S:  ctcgctggaccataggggtta
              ^          
   18821    18965     35    none      4      4
    Errors = 2
T:  ggggatctgcaggcaataacaaac
S:  ggggatctgctgggaataacaaac
              ^  ^          
   18857    19001    125    none      1      1
    Errors = 1
T:  gctattttgatgggcgcttgg
S:  gctattttgacgggcgcttgg
              ^          
   19007    19151     41    none     25     25
    Errors = 4
T:  gcgttttgcttgctgatgactccccaagcgttttgaaaaccatgc
S:  gcgttttgctcgctgatgattccccaagcgtcttaaaaaccatgc
              ^        ^           ^  ^          
   19055    19199     21    none      7      7
    Errors = 3
T:  gcgtcaagcatatagattttatcaatg
S:  gcgtcaagcacattgactttatcaatg
              ^  ^  ^          
   19097    19241     41    none     21     21
    Errors = 3
T:  taaaaccttactagagcatttattcaaccccacaaccgatg
S:  taaaaccttattagagcatttgttcaacccaacaaccgatg
              ^          ^        ^          
   19151    19295     23    none     13     13
    Errors = 2
T:  ttaccgatttggaaatgccagaggcgagcggtt
S:  ttaccgatttagaaatgccagaagcgagcggtt
              ^           ^          
   19175    19319     35    none      1      1
    Errors = 1
T:  aagtgatcaagcaggttaaaa
S:  aagtgatcaaacaggttaaaa
              ^          
   19214    19358     23    none      4      4
    Errors = 2
T:  caaaaatccctatcgtggtcaatt
S:  caaaaatccccattgtggtcaatt
              ^  ^          
   19241    19385     44    none      4      4
    Errors = 2
T:  ctatgagcgggagttctaatgaag
S:  ctatgagcggcagctctaatgaag
              ^  ^          
   19316    19460     41    none     31     31
    Errors = 3
T:  atgatttcatttccaagtctaaccccaaagacatccagcgagtggttaagc
S:  atgatttcatctccaagtctaaccctaaagacatccagcgggtggttaagc
              ^              ^              ^          
   19382    19526     52    none     25     25
    Errors = 4
T:  aaaatacagcactatccccaccccttgctacgtgttagagagcga
S:  aaaatacagcgctatccccaccccttgctatgcgctagagagcga
              ^                   ^ ^ ^          
   19468    19612    116    none     34     34
    Errors = 5
T:  tcgtgcgccaacaaagtggggcaaaggtcttgcttgctttaaaggggtatgcgt
S:  tcgtgcgccagcaaagcggggcaaaggttttgctcgctttaaaagggtatgcgt
              ^     ^           ^     ^        ^          
   19588    19732     23    none      4      4
    Errors = 2
T:  gagagagccacaaagaaatttgcg
S:  gagagagccataaggaaatttgcg
              ^  ^          
   19615    19759     44    none      4      4
    Errors = 2
T:  atagcccggctttcaaagaggctg
S:  atagcccggcctttaaagaggctg
              ^  ^          
   19723    19867     44    none     64     64
    Errors = 7
T:  cgacaagcattatttttaactctttttaccaatacgctacctataaagacaggattttag
S:  cgacaagcatcattttcaactcttttcaccaatacgccacctacaaagacaggattttag
              ^     ^         ^          ^     ^                
T:  ataaaaacaagcaattagaaaact
S:  acaaaaacaagcagttagaaaact
     ^           ^          
   19777    19921     42    none     10     10
    Errors = 3
T:  gtttgaggataaaccctctctatagcgaag
S:  gtttgaggattaaccccctttatagcgaag
              ^     ^  ^          
   19820    19964     37    none      1      1
    Errors = 1
T:  atgctctaaagtgagccggtt
S:  atgctctaaaatgagccggtt
              ^          
   19864    20008     62    none      7      7
    Errors = 3
T:  gatttgaaaagggggtgaaagagcatg
S:  gatttgaaaaaggagtcaaagagcatg
              ^  ^  ^          
   19927    20071     29    none      1      1
    Errors = 1
T:  agcaaaacgctgacgctttgt
S:  agcaaaacgccgacgctttgt
              ^          
   19975    20119     50    none     19     19
    Errors = 4
T:  tagagcatgtagaaaagcatttcaggccctatttagaaa
S:  tagagcatgtggaaaggcatttcaagccttatttagaaa
              ^    ^        ^   ^          
   20028    20172     27    none      3      3
    Errors = 2
T:  atcatatcactaagagcgattat
S:  atcatatcaccaggagcgattat
              ^ ^          
   20104    20248     59    none     49     49
    Errors = 6
T:  atttgctcatccaaacgattaaggatttcaaagaacgctatcataatatagaagtgattt
S:  atttgctcattcaaacgattaaggattttaaagaacgctaccacaatacagaagtgatct
              ^                 ^           ^  ^    ^         ^ 
T:  tagagcctg
S:  tagagcctg
             
   20164    20308     30    none      1      1
    Errors = 1
T:  gcgtgatagacatcgttcaaa
S:  gcgtgatagatatcgttcaaa
              ^          
   20195    20339     35    none      1      1
    Errors = 1
T:  aattgcgattctagacgcttc
S:  aattgcgattttagacgcttc
              ^          
   20231    20375     22    none      1      1
    Errors = 1
T:  gcccgattgcttagaaatgcc
S:  gcccgattgcctagaaatgcc
              ^          
   20288    20432     43    none     35     35
    Errors = 9
T:  atcgccctagcatttttaaagtctccgtagaaaatgatgaagagcttattgaagt
S:  atcgccctagtattcttaaggtttctgtagaaaacgatgaggaaattattgaagt
              ^   ^    ^  ^  ^        ^     ^  ^^          
   20356    20500     89    none     25     25
    Errors = 3
T:  cgttttcttattttttaggcggccctacttgtttagcgggggatt
S:  cgttttcttactttttaggcggccccacttgtttggcgggggatt
              ^              ^        ^          
   20449    20593     26    none      4      4
    Errors = 2
T:  attatacgattgtcaaaaacaact
S:  attatacgatcgtgaaaaacaact
              ^  ^          
   20576    20774     20    none    101    155
    Errors = 70
T:  atggcgtgccgctcccaagcctggctagattggatcaacaagggtttaaaatccttaaaa
S:  atggcgtgccactgccaagcctggctaaaatagattcgcaaggttttaagatcctcaaaa
              ^  ^             ^ ^ ^   ^^^     ^     ^     ^    
T:  acttttcttatgaagactataaaaacagaaactaa............agc.ttttgatta
S:  gcttttcttatgaagattataaaaacaggaattaagatctcaattaaagccttttgatta
    ^               ^           ^  ^   ^^^^^^^^^^^^   ^         
T:  aggctttttg.........................................gggc
S:  aggttttttgattaaggttttttaatcaagtttttttaattaaggtttttggggc
       ^      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^    
   20642    20840     38    none     46     46
    Errors = 8
T:  ttgtaaaaaggcttacgcacaacattccaacgccaagcccggtcagcaccgcgccaatgg
S:  ttgtaaaaagacccacgcacaacattccagtgccaagcccggccaacaccgcgccgatgg
              ^ ^^               ^^           ^  ^         ^    
T:  tgtgca
S:  tgtgca
          
   20726    20924     20    none     46     46
    Errors = 5
T:  cgagcatggtcaaagggactaggggcaagagccaaaagtattttttaaaagaatagcggc
S:  cgagcatggttaaagggattaggggcaagagccacaagtattttttaacagaataacggc
              ^       ^               ^             ^      ^    
T:  gcatta
S:  gcatta
          
   20747    20945     47    none      1      1
    Errors = 1
T:  aaaacgccaccgccaaaccca
S:  aaaacgccactgccaaaccca
              ^          
   20795    20993     29    none      1      1
    Errors = 1
T:  tgaaattacctccataagggc
S:  tgaaattacccccataagggc
              ^          
   20831    21029     28    none      7      7
    Errors = 2
T:  aacgctgatcgttgattgttacatggt
S:  aacgctgatcattgatcgttacatggt
              ^     ^          
   20879    21077     47    none     20     20
    Errors = 5
T:  cttttggtggtgtgcgtgagaagggttgtagcgatagaag
S:  cttttggtggcatgcgtgagaaaagttgtggcgatagaag
              ^^          ^^     ^          
   20930    21128     41    none      4      4
    Errors = 2
T:  catctctttggattaagggaatcg
S:  catctctttgaatcaagggaatcg
              ^  ^          
   21011    21209     23    none     40     40
    Errors = 9
T:  taaagcgcgcataatgctcggtgaaatgaaacattaaaggcacgctaggctgtttaggga
S:  taaagcgcgcgtaatgctcggtgaaatgaagcgccaaaggtacgctttggtgtttaggga
              ^                   ^ ^^^     ^     ^^ ^          
   21071    21269     26    none     37     37
    Errors = 8
T:  tagggaaaggcgcaaaaatgcctaataaaatcaagcccaaactgagcgctaacaaag
S:  tagggaaagggataaaaacacccaataaaatcaaacccaaactgagtgctaacaaag
              ^^^     ^^  ^           ^           ^          
   21098    21296     78    none      1      1
    Errors = 1
T:  aaaagcttttgggcaggcttt
S:  aaaagcttttaggcaggcttt
              ^          
   21177    21375     21    none      1      1
    Errors = 1
T:  gtttaagcagatctaaagaag
S:  gtttaagcaggtctaaagaag
              ^          
   21221    21419     27    none     23     23
    Errors = 6
T:  gcgataaacaacgcttgggtttttaaaatccaaaaacacccct
S:  gcgataaacagcgctaggggttttaaaatcttcaaacacccct
              ^    ^   ^          ^^^          
   21252    21450     41    none      4      4
    Errors = 4
T:  tatggaaaatcacattttgattaa
S:  tatggaaaatggtgttttgattaa
              ^^^^          
   21321    21519     20    none     28     28
    Errors = 8
T:  tggaatgcttttctttgaaaggctcattagcataaacgataaagggga
S:  tggaatgcttctctttaaaaagatcgttggcataaagaataaagggga
              ^     ^   ^ ^  ^  ^       ^^          
   21348    21546     32    none      7      7
    Errors = 2
T:  tctcgtattgttctttgggggcgatgc
S:  tctcgtattgctctttaggggcgatgc
              ^     ^          
   21399    21597     23    none     19     19
    Errors = 5
T:  catgcaaatagaacgcttcttcgcccaaactttcgccat
S:  catgcaaataatacgccccttcgcccaagctttcgccat
              ^^    ^^          ^          
   21423    21621     44    none      1      1
    Errors = 1
T:  cgcttaaatagatcattaagg
S:  cgcttaaataaatcattaagg
              ^          
   21489    21687     68    none     22     22
    Errors = 4
T:  tgctaatgatcttatctagcagatagtcgttgtaaaaaatgg
S:  tgctaatgattttgtctaacagatagtcgttataaaaaatgg
              ^  ^    ^            ^          
   21564    21762     38    none      7      7
    Errors = 2
T:  cagcgcttgagcaataaggcttaaaca
S:  cagcgcttgaacaatagggcttaaaca
              ^     ^          
   21624    21822     22    none     22     22
    Errors = 3
T:  ctttgttgtcgtagtttgggccatgcgagcctgcaaggtgta
S:  ctttgttgtcatagttggggccatgcgagccggcaaggtgta
              ^     ^              ^          
   21723    21921     44    none     77     77
    Errors = 10
T:  atgagcaagacattttcattagagtgttcttttaaaaggtcaggcaaattataaagtaaa
S:  atgagcaagatgttttcattagagcgttcttttaaaaggttgggcaaattatagagcaag
              ^^            ^               ^^           ^  ^  ^
T:  gattcatcataaggagcgatcgcttcacaattggggc
S:  gattcatcataaggggcgatcgcttcgcaattggggc
                  ^           ^          
   21795    21993     25    none     28     28
    Errors = 3
T:  taagatagcttgtaaccttaacattcttttcgccgtcgttcgcgctat
S:  taagatagctggtaaccttaacgttcttttcgccgtcattcgcgctat
              ^           ^              ^          
   21862    22066     70    none     42     48
    Errors = 11
T:  aagactttgataccggctttagtcaagtaagttggcaaattttcataagcgt......tg
S:  aagactttgacacccgctttagtcaagtaagtgggcaagttttcataagcgcccaagctg
              ^   ^                 ^     ^            ^^^^^^^  
T:  tttttaaa
S:  tttttaaa
            
   21971    22175     20    none     39     39
    Errors = 9
T:  aagtggcgttgaaaagagtgagttcattatcggctaaacgcttgcttagtcttggggtg
S:  aagtggcgttaaaaagggtgagttcatgattttctaagcgtttgcttaatcttggggtg
              ^     ^          ^  ^^^    ^  ^       ^          
   21992    22196     21    none      1      1
    Errors = 1
T:  gtgggtttttgatagccataa
S:  gtgggtttttcatagccataa
              ^          
   22023    22227     35    none     10     10
    Errors = 6
T:  gggcgtaattatgtttcctagcgctttcgc
S:  gggcgtaattgctctttctggcgctttcgc
              ^^^^  ^  ^          
   22131    22335     25    none     73     73
    Errors = 7
T:  caaacgaatgggaatgattgggtgaaaaaagagggagcggcttgatggtgggggcgaaaa
S:  caaacgaatgagaatggttgggcgaaaagagagggagcggcttgatagtgggggcgaaaa
              ^     ^     ^     ^                 ^             
T:  atttgagagcgctcactctaaaagcgttcacgc
S:  atttaagagcgctcactctaaaggcgttcacgc
        ^                 ^          
   22158    22362     52    none      2      2
    Errors = 2
T:  gcgaagggcaaaattaagcccc
S:  gcgaagggcaggattaagcccc
              ^^          
   22218    22422     29    none      8      8
    Errors = 5
T:  caatttttagtgttagctaaagcgctag
S:  caatttttagcgttcataaaagcgctag
              ^   ^^^^          
   22269    22473     86    none     22     22
    Errors = 4
T:  taaacactaacgccaagatcgctaaaaagggcgcttttttag
S:  taaacactaaagccaagatcgctaagaatggtgcttttttag
              ^              ^  ^  ^          
   22356    22560     47    none      1      1
    Errors = 1
T:  cgaataatttgacgctcaaaa
S:  cgaataatttaacgctcaaaa
              ^          
   22404    22608     35    none      1      1
    Errors = 1
T:  ttaagacattacccatcatgc
S:  ttaagacattgcccatcatgc
              ^          
   22473    22677     30    none     34     34
    Errors = 6
T:  ccttataagcgctaatgaaatagaaagcaacggaattgagcaggctaaaaacta
S:  ccttataagcactaatgaaatagaaagcgacagaattgagccaactaaaaacta
              ^                 ^  ^         ^^^          
   22504    22708     55    none      1      1
    Errors = 1
T:  acgcatcaaagaagcagagat
S:  acgcatcaaataagcagagat
              ^          
   22584    22788     27    none     25     25
    Errors = 6
T:  aaaaaagcaccacaaccatcatggcgataaaactgacctggttgc
S:  aaaaaagcacgataataatcatggctataaaactaacctggttgc
              ^ ^  ^^        ^        ^          
   22612    22816     73    none      1      1
    Errors = 1
T:  ataaacataaacgaacaaagg
S:  ataaacataagcgaacaaagg
              ^          
   22715    22919     31    none     30     30
    Errors = 3
T:  aacttaggggttttaaaaacctcagatggaataatgatgccaaacacgcc
S:  aacttaggggctttaaaaacttcagatggaataatgatgtcaaacacgcc
              ^         ^                  ^          
   22747    22951     37    none      1      1
    Errors = 1
T:  atcaatcttaggattatatcg
S:  atcaatcttatgattatatcg
              ^          
   22840    23044     21    none     56     56
    Errors = 9
T:  tggtttatttaaag..tggaaagtgctttttttagggtggttgcatttaagagctttaaa
S:  tggtttattttaagggtggaaagcg..ttttttagggtggttgcgtttaagagttttaaa
              ^   ^^       ^ ^^                 ^        ^      
T:  gcgcgttggttgtaggat
S:  gcgcgtttgttgtaggat
           ^          
   22862    23066     24    none      1      1
    Errors = 1
T:  tcatcacgcctcatagttagg
S:  tcatcacgccccatagttagg
              ^          
   23052    23258     27    none    166    168
    Errors = 56
T:  ggggcaaatc....caaataaggagcatgccatgaagtgtaaaagtggcaaacgctcttg
S:  ggggcaaatctgttcttaaaagg.gtttatcatgaaaagaaagcatgataaaaactcttg
              ^^^^ ^^ ^    ^ ^^ ^^      ^^ ^  ^^^  ^^   ^^      
T:  gaaactattataccttgaaatttctttttcttggtttaaggtagtgtttttgat.gaaac
S:  gttagtattatacattaaaatctcttttaaggggtttaaagtggtcttttctatagaaaa
     ^^ ^        ^  ^    ^      ^^^^       ^  ^  ^    ^^  ^    ^
T:  gctaatttctaag..agcgttcccctaagcctaaaaaacttaggggtttccttatgtgaa
S:  gtaattttattagccaaagttcccctaagcctaaaaagcttaggggtttccttgtgggt.
     ^^ ^   ^ ^  ^^ ^^                   ^               ^  ^ ^^
T:  gcgggtttgtcct
S:  ...ggtttgtcct
    ^^^          
   23142    23302     25    none     63     17
    Errors = 51
T:  ggggcgttttttggttagtggagcgcgcgaacgctaaagatgtttggggtttcttgcttg
S:  ggggcgtttt..........................................cat...tg
              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ^ ^^^  
T:  ggtggtttaaaatgatcgcttga
S:  ggttata.aaaaggatcgcttga
       ^^ ^^    ^          
   23179    23338     53    none     12     11
    Errors = 3
T:  gctaattttttatttagattgcaaaaaacgcc
S:  gctaattttt.atttagatagtaaaaaacgcc
              ^        ^ ^          
   23233    23392     22    none      1      1
    Errors = 1
T:  aaaaaactttgtttggtggaa
S:  aaaaaactttatttggtggaa
              ^          
   23334    23548     71    none     79    134
    Errors = 60
T:  aattaaaaaa...............agct.....aaaag...aaaag...........tc
S:  aattaaaaaagtttagaaaaataaaagctttatgaaaagttaaaaagcgagtgggaagtc
              ^^^^^^^^^^^^^^^    ^^^^^     ^^^     ^^^^^^^^^^^  
T:  agttaaaaa.gattaaaccccctaaaaagggag..tt................taaaaag
S:  agcgaaaaaagattaaacccccaaaaaagagagggttcaaaaaagaaatcccttaaaaag
      ^^     ^            ^      ^   ^^  ^^^^^^^^^^^^^^^^       
T:  g.agttt.aagcttttagtaagcaaacacatagt
S:  ggagttttaagcttttagtaagcgaacacatagt
     ^     ^               ^          
   23502    23716     23    none     97     97
    Errors = 26
T:  aatagtaatttgtgttgatcgtggggatcttcacgcctaattccatgccatgttgcgcgc
S:  aatagtaattcgtgttgatcgtggggatctttgtgcctagttcaatgccatgttgggccg
              ^                    ^^^     ^   ^           ^  ^^
T:  tatgatcag.cgc.ctattcttttatttctggcgagattggtccttaagcccagattga
S:  cgttatcggtcgctctatgctttt..tcctagcgaggttcattctcaaacccagattga
    ^^ ^   ^ ^   ^    ^     ^^ ^  ^     ^  ^^ ^  ^  ^          
   23565    23779     46    none     40     40
    Errors = 8
T:  agaattggaagttagaggtgttgattttagctttataataattgttcacattcgctaaat
S:  agaattggaaattcgccgtgttgattttggccttataataattattcacgttcgctaaat
              ^  ^ ^^           ^  ^           ^     ^          
   23615    23829     27    none      4      4
    Errors = 4
T:  gtcccggctagttggataccgcca
S:  gtcccggctaaggcgataccgcca
              ^^^^          
   23643    23857     62    none      1      1
    Errors = 1
T:  caaaagaaattttattgtgtt
S:  caaaagaaatcttattgtgtt
              ^          
   23742    23956     35    none     37     37
    Errors = 6
T:  ccacgccataagtccaaacatcagaatcggagttgaaaaattgggacttgttatagg
S:  ccacgccataggtccagacatcagaagaggcgttgaaaaattgggatttgttatagg
              ^     ^         ^^  ^               ^          
   23784    23998     53    none      7      7
    Errors = 3
T:  caaagccgtagtatctcgcgccccatc
S:  caaagccgtaataccttgcgccccatc
              ^  ^  ^          
   23844    24058     37    none      7      7
    Errors = 2
T:  cttgaaagccaatcccattcatcgcgc
S:  cttgaaagcctatcccgttcatcgcgc
              ^     ^          
   23892    24106     53    none     11     11
    Errors = 5
T:  gcggcgattagcccggcgcgtctgaaagggt
S:  gcggcgattaagccagcacgcctgaaagggt
              ^^  ^  ^  ^          
   23988    24202     56    none     43     43
    Errors = 5
T:  gagaatggatgttggagtcaatgtagtaattatcctgtatgccttgcgggctgttagggt
S:  gagaatggatattggagtcaatatagtagttatcctgtatgccttgtgggctattagggt
              ^           ^     ^                 ^     ^       
T:  tag
S:  tag
       
   24051    24265     32    none      7      7
    Errors = 4
T:  caggcaagctagagagcgccgctgtga
S:  caggcaagcttgaaatggccgctgtga
              ^  ^ ^^          
   24105    24319     20    none     22     22
    Errors = 6
T:  gttcgcctagctttttgtactggccgctgaaattcgctaaag
S:  gttcgcctagtttttgatactgactgctgaagttcgctaaag
              ^    ^^     ^ ^      ^          
   24150    24364     28    none     25     25
    Errors = 4
T:  tgtaggcgagatttcgcgcattatggattcgctccgcttggtcgc
S:  tgtaggcgaggttgcgcgcgttatggattcgctcggcttggtcgc
              ^  ^     ^              ^          
   24319    24530     22    none    141    138
    Errors = 19
T:  gcgatgctgttttttagattcgttacggtttctcccacatacgcgcagccggctccccaa
S:  gcgatgctgtcttttagattcgttacggtctctcccacatacgcgcaaccggctccccaa
              ^                  ^                 ^            
T:  gtgttagaagtaaccgtgccagatggcgtgccacggagattgccgtcgctacccttttca
S:  gtgttatcagttaccgtgccggatggcgtgccacggagatggccgttt.tgcactt..ca
          ^^   ^        ^                   ^     ^^^ ^ ^   ^^  
T:  tggcatactcctaaagagtctttcacgaacgctgcagggat
S:  tggcacacccctaaagagtcttttacgaactctgcagggat
         ^  ^              ^      ^          
   24357    24568     27    none     16     16
    Errors = 2
T:  tttcaaagtccttcaccactgcttgagcgcggttta
S:  tttcaaagtctttcaccactgcttgggcgcggttta
              ^              ^          
   24387    24598     52    none      3      3
    Errors = 2
T:  cgcttgcgctctagcgttagcga
S:  cgcttgcgctttggcgttagcga
              ^ ^          
   24489    24700     21    none     50     50
    Errors = 8
T:  gggttgaatgctttcccagtgtctaggttgtgctggttttgcgcgttggcggtaacgatt
S:  gggttgaatgtcttcccggtgtctaggttgcgctggttttgcgcgtttgcagcaacgatc
              ^^     ^            ^                ^  ^ ^      ^
T:  ttggattgct
S:  ttggattgct
              
   24511    24722     55    none      1      1
    Errors = 1
T:  tacggctatttcagcgttttt
S:  tacggctattgcagcgttttt
              ^          
   24861    25003     28    none    295    226
    Errors = 121
T:  aaatcccgcatgcgctcccgtcgccttt...atctattccggcccataaactattgccac
S:  aaatcccgcaagcgctcccatcgcctttcaaatatattccttcccataaactaccactac
              ^        ^        ^^^  ^      ^^           ^^^ ^  
T:  cggccacattgcctgcaccaccattactcaaccatgggcatgcttcattaagagtggtta
S:  tcgcacca...cctgcaccaccattgttgatccatgggcatgcgctattaagggtagtta
    ^^  ^^  ^^^              ^^ ^ ^            ^^^      ^  ^    
T:  aaatagtgctagcctgttttaaaagctcttgagcgttatttgacactttgatgtcttctt
S:  taatggtgctagcctgttctaaaagaacttgagcgttattt.....tttg.taac.....
    ^   ^             ^      ^^              ^^^^^    ^ ^^ ^^^^^
T:  taatttcttcatacttcccattcacccacttgactgaaacaaattttccattagtccatg
S:  .aatttcttc.....tcc.att....................att....attcgt.....
    ^         ^^^^^   ^   ^^^^^^^^^^^^^^^^^^^^   ^^^^   ^  ^^^^^
T:  ggaatttccatctttctcctggctggacgctatcattttttttccctttaatttcaaaat
S:  ...att..cgtgtttc.................cattattttta...ttgattgtgaatt
    ^^^   ^^ ^ ^    ^^^^^^^^^^^^^^^^^    ^     ^^^^  ^   ^^^  ^ 
T:  taagttct...ttggtgtcgc
S:  tgagttctgtgttggtgtcgc
     ^      ^^^          
   24900    25042     26    none     11     11
    Errors = 4
T:  ggaatatcttgcccgcttgctcc.aaaagcct
S:  ggaatatcttttccgct.gctcccaaaagcct
              ^^     ^     ^        
   25094    25245     51    none    168    177
    Errors = 48
T:  tgatttgataggctttattgatttttgcgtaattttcagtggatataccgctccactttc
S:  tgatttgataagctttattgattttcgcgtaattttcagtggataaaatgctgtatggtc
              ^              ^                   ^ ^^   ^^ ^^^  
T:  ctggttcataaaatgaatcgc...aagcaatggtagtccc..cccatt....tgacggca
S:  ctggttcataaccagtagtgccacaagtaatggtagtgcctccccattgatttgaaggcg
               ^^^ ^ ^^  ^^^   ^         ^  ^^      ^^^^   ^   ^
T:  cattttcaaaggtttggacgcccccatttttatttttgtcagagccagggccacaaacgc
S:  tgttgtggaaagtttgaacgcccccatttttgcttgtgtctttaccgggaccacaagggc
    ^^  ^ ^^  ^     ^              ^^  ^    ^^^^  ^  ^      ^^  
T:  tgatcgaatagctcatg
S:  tgatcgcatagctcatg
          ^          
   25146    25297     47    none      1      1
    Errors = 1
T:  ctaaaagcaccgcttgatacg
S:  ctaaaagcacggcttgatacg
              ^          
   25197    25348     29    none      4      4
    Errors = 2
T:  aattcttcgcactagcgttcaaat
S:  aattcttcgcgctcgcgttcaaat
              ^  ^          
   25227    25378     23    none      1      1
    Errors = 1
T:  cgttattgatagcgttggggt
S:  cgttattgatggcgttggggt
              ^          
   25308    25459     23    none     58     58
    Errors = 9
T:  cggactgcctaataagagtgtttagggcactataactcgttaaaagattgttcagtcttt
S:  cggactgcctgatgagagcgtttaggacgctataattcgttaaaaggttgttcaatcttt
              ^  ^    ^       ^ ^      ^          ^       ^     
T:  catagctatctgaaagat
S:  catagctgtctgaaagat
           ^          
   25332    25483     41    none      1      1
    Errors = 1
T:  gaatgcctttagtgtttttca
S:  gaatgcctttggtgtttttca
              ^          
   25377    25528     95    none      4      4
    Errors = 2
T:  tttgatagcccgcactcacaaaaa
S:  tttgatagccggcgctcacaaaaa
              ^  ^          
   25481    25632     46    none      9      9
    Errors = 5
T:  tttctccttttattacttgaaataagatt
S:  tttctcctttactttattaaaataagatt
              ^^  ^^  ^          
   25533    25684     36    none      6      6
    Errors = 3
T:  tgtgtctttaggtgaaaccataccgc
S:  tgtgtctttaagtaagaccataccgc
              ^  ^ ^          
   25585    25736     37    none     16     16
    Errors = 2
T:  agtataaattcatgggattttgatattaattaggcg
S:  agtataaattaatgggattttgatactaattaggcg
              ^              ^          
   25636    25785     55    none     14     12
    Errors = 5
T:  aaaaaaaaaaaggtttttgtgttatttctaaaca
S:  aaaaaaaaaa..gattttgtggtgtttctaaaca
              ^^ ^       ^ ^          
   25691    25947      4     -23      0    107
    Errors = 109
T:  ataaaggtcattttaaaagaaatgaggttgttt...........................
S:  ataaaggtcattttaaaagaaatgaggttgtttaatagggggtagctataaaaaaggggg
                                     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  ............................................................
S:  tttttttaactttgattgtttggtttggttgcttgagatttgtttgtaataaagcggttt
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  ....................gaataggggt
S:  taaaagaaatgaggttgtttgaatggaggt
    ^^^^^^^^^^^^^^^^^^^^    ^ ^   
   25824    26094     27    none    129    143
    Errors = 45
T:  ttgtttgaataggggtagtgat.aaaaaaggg..tttttaacttggattgttttttggtt
S:  ttgtttgaatggaggtagctatcaaaaaaggggttttttaactttgattgttt...ggtt
              ^ ^     ^^  ^         ^^          ^        ^^^    
T:  tgttgcaaaaaggattt...cttaa.att....gtaaaaatgatttcttaaat...tttc
S:  tgttataaaaatgattttttctttagatttgttgtaaattttgttgtaaaaatgattttc
        ^^     ^     ^^^   ^ ^   ^^^^     ^^ ^^  ^^^^    ^^^    
T:  ttaag.....aggagcgttttgccaatcgtttcccccaaaaactcaag
S:  ttaaggagatagaaaggttttgc.aatcatttcccccaaaa.ctcaag
         ^^^^^  ^ ^^       ^    ^            ^      
   25933    26129     28    none     82      8
    Errors = 76
T:  ttaaaaaaagcggtggtttcaataaaacgctaatttataagagcgttccctaagcccaaa
S:  ttaaaaaaag..................................................
              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  aagcttagggtttgcttgtaaaagtgggtttgtccttgagtt
S:  ........................tggggttatccttgagtt
    ^^^^^^^^^^^^^^^^^^^^^^^^    ^  ^          
   26078    26315     30    none    117    158
    Errors = 75
T:  tttgcatgcggttagtaaaaaa..ttaccgc.......tcgct.tggtg...........
S:  tttgcatgcgattattaaaaaagcttggtgcgagattctcactcttgtgaagcacccaaa
              ^   ^       ^^  ^^^  ^^^^^^^  ^  ^ ^   ^^^^^^^^^^^
T:  cg....agacgctt...att.............ctt...ttaaacaaggctttgattcgt
S:  cgctaaagacgattgggatttctgctaaggagtcttaaatttaaaaaggctttgag.cgt
      ^^^^     ^  ^^^   ^^^^^^^^^^^^^   ^^^  ^  ^          ^^   
T:  ttcttaaagct.taaccaacgcttctattcaacgctctgttaagacaaagccttaatccc
S:  tccttaaaactatcatcaacgctt.tattaaaa.caaagcctagcctaa.cattaatccc
     ^      ^  ^ ^ ^        ^    ^  ^^ ^^^ ^^^  ^ ^  ^ ^        
T:  ct
S:  ct
      
   26109    26346     38    none      1      1
    Errors = 1
T:  gtcttgggcgtgtgatcctgg
S:  gtcttgggcgcgtgatcctgg
              ^          
   26148    26385     22    none      1      1
    Errors = 1
T:  gctctaaaagctgagcgcacc
S:  gctctaaaagttgagcgcacc
              ^          
   26171    26408     81    none      1      1
    Errors = 1
T:  cctacggttcggccaatgaca
S:  cctacggttctgccaatgaca
              ^          
   26253    26490     59    none      1      1
    Errors = 1
T:  aatccacattagggtagagat
S:  aatccacattggggtagagat
              ^          
   26331    26568     23    none     19     19
    Errors = 4
T:  ccactttcgcggcgatttcgctcaacctctcgtccattt
S:  ccactttcgcagcgatttcgctcaagcgttcgtccattt
              ^              ^ ^^          
   26388    26625     71    none     34     34
    Errors = 5
T:  cgcctttttggtgcagttcgtctttcaagccttttaagattttagcgcgcggat
S:  cgcctttttgatgcagttcatctttcagaccttttaagatttttgcgcgcggat
              ^        ^       ^^              ^          
   26463    26700     20    none      4      4
    Errors = 2
T:  ttttgtctttcactcgcgcgatgt
S:  ttttgtcttttacgcgcgcgatgt
              ^  ^          
   26484    26721     83    none      1      1
    Errors = 1
T:  atttatccacatttttcacat
S:  atttatccacgtttttcacat
              ^          
   26568    26805     74    none      1      1
    Errors = 1
T:  aagcgctaatgcccgcgctaa
S:  aagcgctaatacccgcgctaa
              ^          
   26658    26895     45    none     16     16
    Errors = 5
T:  aggcgttttggctgtgatcagcgtgcaaggttagga
S:  aggcgttttgcccatgatcggcgtgtaaggttagga
              ^ ^^     ^     ^          
   26704    26941     25    none      1      1
    Errors = 1
T:  gggcgtgatttccacttcgcc
S:  gggcgtgattcccacttcgcc
              ^          
   26748    26985     38    none     19     19
    Errors = 4
T:  tggtgtgttttaagcgactataaggataccctctcagca
S:  tggtgtgtttcaatcggctataaggataacctctcagca
              ^  ^  ^           ^          
   26811    27048     71    none     25     25
    Errors = 4
T:  cataagagcgtgcgatgtccggataaatgataggcgctcccactt
S:  cataagagcgcgcgatgtccggataaataatgggtgctcccactt
              ^                 ^  ^  ^          
   26883    27120     44    none      1      1
    Errors = 1
T:  tggccatagtttggtaatctt
S:  tggccatagtctggtaatctt
              ^          
   26946    27183     41    none     19     19
    Errors = 4
T:  tggaataaagggtggataagatagacactccgctagaga
S:  tggaataaagagtagataaaatagacaccccgctagaga
              ^  ^     ^        ^          
   26988    27225     38    none      1      1
    Errors = 1
T:  tgctagggaaggctgaaaaca
S:  tgctagggaaagctgaaaaca
              ^          
   27044    27281     48    none     18     18
    Errors = 2
T:  gcacaaagctcctgtggcgcaattccaattcaaattcc
S:  gcacaaagcttctgtggcgcaattccagttcaaattcc
              ^                ^          
   27100    27337     37    none      8      8
    Errors = 5
T:  cccctgtgaggagtaatttgcacacatc
S:  cccctgtgagtaatagcctgcacacatc
              ^ ^  ^^^          
   27138    27375     46    none      1      1
    Errors = 1
T:  cgactaaatcttctatcctat
S:  cgactaaatcctctatcctat
              ^          
   27207    27444     29    none     23     23
    Errors = 3
T:  ttgccattgacatagctgatcttagattggcatccagcggtag
S:  ttgccattgatatagctgatcttagattgacacccagcggtag
              ^                  ^  ^          
   27237    27474     47    none      1      1
    Errors = 1
T:  ctggatcgtaagaaaaaaacc
S:  ctggatcgtaggaaaaaaacc
              ^          
   27299    27536     25    none     15     15
    Errors = 2
T:  ccaccgctttaggcccacgagtgctttcaatcgtt
S:  ccaccgcttttggcccacgagtgcattcaatcgtt
              ^             ^          
   27386    27624     50    none     62     63
    Errors = 7
T:  ttcatagcgttcattattttcattattgactaaagtgacagacatt.tgacttccttaag
S:  ttcatagcgtgcattattttcattattgattaaagtaacagacattgtgatttccttaag
              ^                  ^      ^         ^   ^         
T:  ttttgatagcattcaactcctaa
S:  ttttgatagtatccaactcctaa
             ^  ^          
   27439    27678    118    none      3      4
    Errors = 2
T:  taaaaacattgcgtttttt.caag
S:  taaaaacatttcgtttttttcaag
              ^        ^    
   27558    27797     62    none      1      1
    Errors = 1
T:  aggataaacagtggcttacaa
S:  aggataaacaatggcttacaa
              ^          
   27656    27895     26    none     36     36
    Errors = 5
T:  gattaaagacaacaaattgcatgtgccaaaccaccccattatccccttcattgagg
S:  gattaaagacggcaaattgcatgtgccaaattaccccattatccctttcattgagg
              ^^                  ^^             ^          
   27695    27934     71    none     13     13
    Errors = 2
T:  gcattggatcagatattaccccggcgatgatta
S:  gcattggatcggatattaccccagcgatgatta
              ^           ^          
   27767    28006     32    none      1      1
    Errors = 1
T:  catggtatgaggtgtttgtgg
S:  catggtatgaagtgtttgtgg
              ^          
   27824    28063     38    none     25     25
    Errors = 5
T:  atcaaaaatttaaagattataaagaattaagcccagaagagcaat
S:  atcaaaaattcaaagaccataaagagttaagccctgaagagcaat
              ^     ^^       ^        ^          
   27878    28117     20    none     16     16
    Errors = 3
T:  ttgaagcgattaaccattataaagtttctattaaag
S:  ttgaagcgatcaaccactataaagtctctattaaag
              ^     ^        ^          
   27914    28153     20    none     16     16
    Errors = 2
T:  ggcctttgacaacgcctattggtgaagggtttagat
S:  ggcctttgaccacgcctattggtgaggggtttagat
              ^              ^          
   27935    28174     38    none      1      1
    Errors = 1
T:  ctttgaatgtagcgttacgcc
S:  ctttgaatgtggcgttacgcc
              ^          
   27974    28213    164    none      1      1
    Errors = 1
T:  tgtgcttgaggccggtaaggt
S:  tgtgcttgagaccggtaaggt
              ^          
   28140    28379     29    none      2      2
    Errors = 2
T:  aactaaaggttaaaaaaatccg
S:  aactaaaggtagaaaaaatccg
              ^^          
   28235    28474     38    none     66     66
    Errors = 7
T:  aagcagcggcataggggtaaaacccatcagtaaagaaggcacagagaggctagtgagaaa
S:  aagcagcggcgtagggataaaacccatcagcaaagaaggcacagagaggttggtgagaaa
              ^     ^             ^                  ^ ^        
T:  ggcgattgaatacgcaattgataacg
S:  agcgattgaatacgcgattgataacg
    ^              ^          
   28292    28531    103    none     19     19
    Errors = 3
T:  ttgtgcataaaggtaacatcatgaaatacaccgaagggg
S:  ttgtgcataagggcaacatcatgaaatataccgaagggg
              ^  ^              ^          
   28396    28635     54    none      1      1
    Errors = 1
T:  aaccctaaaaacggtaaagaa
S:  aaccctaaaaccggtaaagaa
              ^          
   28466    28705    152    none     16     16
    Errors = 4
T:  tgcaacaaatcttattgcgccctagcgaatacagcg
S:  tgcaacaaattctcttgcgccctagtgaatacagcg
              ^^ ^           ^          
   28619    28858     68    none      1      1
    Errors = 1
T:  ctcctaaatatgccgggctgg
S:  ctcctaaatacgccgggctgg
              ^          
   28688    28927     32    none      1      1
    Errors = 1
T:  ggcatatgggttgggtggaag
S:  ggcatatgggctgggtggaag
              ^          
   28757    28996     50    none     37     37
    Errors = 3
T:  tcgtttctgcgatggaaaaagcgattaaaagcaagaaagtaacttacgatttcgctc
S:  tcgtttctgctatggaaaaagcgattaagagcaagaaagtaacttatgatttcgctc
              ^                 ^                 ^          
   28808    29047     33    none      1      1
    Errors = 1
T:  gctctgaatttgctagcgtga
S:  gctctgaattcgctagcgtga
              ^          
   28904    29135     32    none     63     55
    Errors = 16
T:  gtgaaagagcgttttttaagcttttaaatggtgtttgaatgcgaaaaaaaggctaatact
S:  gtgaaagagccttt...aagctct.....ggtgtttgaatgcgattata.ggctaatact
              ^   ^^^     ^ ^^^^^               ^^ ^ ^          
T:  atcat.aaggaatgaagttgataa
S:  atcattaaggaataaagttgataa
         ^       ^          
   28949    29180     26    none     13     13
    Errors = 2
T:  atgtggttttgttcattttaacggcgatctttt
S:  atgtggttttattcattttaacagcgatctttt
              ^           ^          
   28976    29207     28    none      1      1
    Errors = 1
T:  tcatgcttttggtgagttatt
S:  tcatgcttttagtgagttatt
              ^          
   29005    29236    117    none      1      1
    Errors = 1
T:  cattatagcgcggctgtcatt
S:  cattatagcgtggctgtcatt
              ^          
   29144    29375     24    none     22     22
    Errors = 3
T:  acgaccctaaagatcaaaaaagcgtaaccgtttatcgtaacg
S:  acgaccctaaggatcaaaaaagcgtgaccgtctatcgtaacg
              ^              ^     ^          
   29169    29400     43    none      1      1
    Errors = 1
T:  cacgcgctttagcttcccttt
S:  cacgcgctttggcttcccttt
              ^          
   29229    29460     20    none     17     17
    Errors = 2
T:  atatttcagccctcgctcaaagtttaatcaatcagca
S:  atatttcagctctcgctcaaagtttagtcaatcagca
              ^               ^          
   29261    29492     47    none     12     12
    Errors = 2
T:  agtggaagtgaaatactatggttggcggatca
S:  agtggaagtgcaatactatggctggcggatca
              ^          ^          
   29343    29574     22    none     35     35
    Errors = 7
T:  tttttttaaagcccttaaaagagagcactgacatttcaaagcccatttttagctg
S:  tttttttaaaacccttaaaagagagcgatgagatgtcaaaacccgtttttagctg
              ^               ^^   ^  ^     ^   ^          
   29396    29627     24    none     31     31
    Errors = 7
T:  ttttatacgctttgctgttaatgggcttttttatcagcgcgcgttctgttt
S:  ttttatacgccctgctactagtgggcttttttatcagtgcacgttctgttt
              ^^    ^^  ^                ^  ^          
   29437    29668     44    none     17     17
    Errors = 3
T:  tttatttaagagcaaagctcattaaaacttttaggct
S:  tttatttaagggcaaagctcattaattcttttaggct
              ^              ^^          
   29482    29713     28    none      1      1
    Errors = 1
T:  attggagcgtgtattaaaaag
S:  attggagcgtttattaaaaag
              ^          
   29541    29772     20    none     31     31
    Errors = 5
T:  agggcaagctgatgctgtgaaaagcggtgttgtttccttttaaattgatag
S:  agggcaagctcacgctgtaaaaagcggtgttgtttcctctcaaattgatag
              ^ ^     ^                   ^ ^          
   29597    29828     27    none     36     36
    Errors = 5
T:  cgattttatagtctagttggtgggatttcaataaaaaatcattcagcaaacaatca
S:  cgattttataatctaattggtaggatttcaataaaaagtcattcaacaaacaatca
              ^    ^     ^               ^       ^          
   29625    29856     35    none      1      1
    Errors = 1
T:  agcccaaattgtcatggctaa
S:  agcccaaattatcatggctaa
              ^          
   29661    29892     46    none      1      1
    Errors = 1
T:  cttttaatttcagggcaaaat
S:  cttttaattttagggcaaaat
              ^          
   29712    29943     47    none      5      5
    Errors = 2
T:  ggcacgcatagccccccagcccctt
S:  ggcacgcataaccctccagcccctt
              ^   ^          
   29784    30015     41    none     25     25
    Errors = 4
T:  tgaaattgtggagacgttgggtcaaattgtccgtgtcaatggggg
S:  tgaaattgtgaaggcgttgggttaaattgtccgtatcaatggggg
              ^  ^        ^           ^          
   29836    30067     64    none     11     11
    Errors = 2
T:  gggcgatgaggggggctgaaactttatgata
S:  gggcgatgagaggggctgaagctttatgata
              ^         ^          
   29913    30144     56    none     13     13
    Errors = 5
T:  ggcggttatcttgcaagaacaaatgcgcatcgc
S:  ggcggttatcctgtaagaataggtgcgcatcgc
              ^  ^     ^ ^^          
   29976    30207     26    none      7      7
    Errors = 3
T:  tgggttttaacaagatagttttaacgc
S:  tgggttttaataaaatcgttttaacgc
              ^  ^  ^          
   30003    30234     32    none      1      1
    Errors = 1
T:  cgttgcaatactgggctaata
S:  cgttgcaatattgggctaata
              ^          
   30051    30282     25    none     16     16
    Errors = 3
T:  tggtttttccggcattcgtgttagttgcgctgataa
S:  tggtttttccagcattggtgttagtcgcgctgataa
              ^     ^        ^          
   30093    30345     24    none     17     38
    Errors = 25
T:  atggtttaacttttaaagtggta.....................agcgccatcaaaga
S:  atggtttaacctttaaattgatagtcgttacctctaaactgataagccccatcaaaga
              ^      ^  ^  ^^^^^^^^^^^^^^^^^^^^^   ^          
   30290    30542     24    none    173    173
    Errors = 34
T:  agaagtcaatacatttttgatttgtggcaacttcacatttttaagtgcttctcttgggac
S:  agaagtcaattcatttttgatttgtggtaacttcacattctttaacgcttctcttgggac
              ^                ^           ^  ^ ^^              
T:  ttcaatgactaa.tctctcaaacacttggtcgcttaaagggttatcaatatcaaaaatga
S:  ttcaaccactaactcgtttaatga.ttggtcgctcatagggttatcaatatcaaagatga
         ^^     ^  ^^ ^  ^^ ^         ^ ^                  ^    
T:  aacttaagatattgtggagtgagttataggtgattttgtcaatcaacgcataattcagtc
S:  aattcaaggtattgtggagcgagttatacgataccttgtcaattaacgcatagagtagtc
      ^ ^   ^          ^        ^ ^^ ^^        ^        ^^^^    
T:  tcacgccctctgct
S:  taatgccctctgct
     ^ ^          
   30390    30636     37    none     76     70
    Errors = 17
T:  ctatggcggtaactatgcttttagatagtctagggctgatgttgccaagttgtgtcgcta
S:  ctatggcggttacgatactcttggatagtctaggactgatgttaccaagctgtgtcgcta
              ^  ^  ^  ^  ^           ^        ^     ^          
T:  aatctgtcggcgaaatgaagcaataacccgcatcgg
S:  aatctg......agataaagcaataccccgcatcgg
          ^^^^^^ ^  ^        ^          
   31536    31689     44    none   1109   1016
    Errors = 440
T:  agcactttagcaatcaatgtcctactcacttttttgccttgtcgcatagctttaacaagg
S:  agcactttagtaatcaatgtcttactcacttctttgccttgtcgtaaagcgttggcaagg
              ^          ^         ^            ^ ^   ^  ^^     
T:  ttattaactttaatgtttcgtttcataccttgtttgaagtcatcg.cttaccgcacattt
S:  ttattgattttaatattgtggtt.atagcttgctttaaaacttttacttttagcgcatct
         ^ ^      ^  ^^ ^  ^   ^    ^  ^  ^^ ^ ^^^   ^^^  ^   ^ 
T:  tcgtgcttctatgcgtttaatcgcattttcct.gtttttttatcattgcgtccaaaaaga
S:  ttgtaaatctagtcttttaatcgcttgtagctcgtatttctct.atgtcatcagcatcaa
     ^  ^^^    ^^ ^         ^ ^ ^^  ^  ^   ^ ^ ^  ^^ ^  ^^^ ^^^ 
T:  actctttagggtgtccatacccacgagacattttctgtaatgctttaatattgcttctaa
S:  aagttctaggactgccat........gatattgcct....tgctctaataaaacttttaa
     ^^^ ^    ^^^^    ^^^^^^^^  ^   ^^  ^^^^    ^     ^^^   ^   
T:  tgtcctcgccaatagtctctatacccaatttag.agtaatcatagggcatacaagtcgct
S:  ccctgttttcaag.gtgtctataa..aactcatcagcaatctttgga.atactcatcgct
    ^^^^^ ^^^   ^^  ^      ^^^  ^ ^ ^^  ^    ^ ^  ^^    ^^^     
T:  tttaattctgtcttaacgactttattgagagcgagtttattaagaccgataccctcttta
S:  tttaattttgtcgtagaaagctcatcaaagaatacgccataattgtccttaccttgttta
           ^    ^  ^^^ ^^ ^  ^^ ^^^^^ ^^^^  ^ ^^^^ ^^    ^ ^    
T:  ttcctagagagaaaagtataaacgctgtcatttatgcgtgtgagagcttgtggtaagtcg
S:  t..caa...agaat.gtatagactttattgtgtaagcgtgtgatagattgggttaaaggg
     ^^ ^ ^^^    ^^     ^  ^^ ^ ^^ ^  ^        ^  ^   ^ ^   ^^^ 
T:  ctaggaactgaaaatttaatccctgtgaatttagcccaaacctcaccaaaattatcaggt
S:  atag....tgaa..tgtaatccctgtgaaagtcatatccactttaccaaaatccttt..t
    ^   ^^^^    ^^ ^             ^^ ^^^^^^^  ^ ^        ^^ ^^^^ 
T:  ctgcaacttat.c.aaatctatcctataagtcttattcttattagcaatcaattgtccgc
S:  ctgtcgctaatactaaatctacttttccagtctcggcgttttga.caat.aa........
       ^^^  ^  ^ ^       ^^^ ^^^     ^^^^^  ^ ^ ^    ^  ^^^^^^^^
T:  catagcaaatcgctacttgtctgaattgtttaccccatatc.aataagtggtttttcaaa
S:  .....caaatcgcctcttgattgaaatactttgccaa.atctaataattggtctttcaag
    ^^^^^        ^^    ^^    ^ ^^  ^^  ^ ^   ^     ^    ^      ^
T:  tcaaatgtgctactaggttcgttttggaatacaaaaaagctaacctctttgtctggtaag
S:  ttaaaggagttactaggttcgttttgaaacacaaagaaactaacttctttgcttggtaat
     ^   ^ ^ ^                ^  ^     ^  ^     ^      ^^      ^
T:  atattgtctttagggttgtctttccaataccctaacacttcaatataaccaatgaaatct
S:  aatgggtcatttaacttatctttccaataacctgttacttgtagataacctaaaaagtgt
     ^^^^   ^  ^^^^  ^           ^   ^^^    ^^ ^      ^ ^^  ^ ^ 
T:  ctgtcaatattcattatgtcttttaatgcttgtgtccttgccatattttcttttctagtg
S:  ctcttttggtctaatagagattttagctcttgtgtccttttaatattgtctttttgagtg
      ^ ^^^^^ ^^ ^  ^^^^     ^^^           ^^^     ^      ^^    
T:  tagcggtatctctcaacaaatttatcgctagacataaagtccctcattgtggcttctttt
S:  aagcggtattttttaacaaatttctcactagacataaagtctttcattgtggtttcactt
    ^        ^ ^ ^         ^  ^              ^^         ^   ^^  
T:  ttaaaaaatttatccacataacccctacccaatgtgttatagagtgtcgcataaatgttc
S:  ttagga..tttaagaatttat....taacaaaaggctta..........cctaa.tgctg
       ^^ ^^    ^^^ ^^  ^^^^^  ^ ^  ^ ^^   ^^^^^^^^^^ ^   ^  ^ ^
T:  tcaatcctatctttgtagttcttaaattttgtagtctctttaccattttcaggttgtggg
S:  tggatagt....ttg.agagcg...at.....agtc.ctatactctct.caa........
     ^^  ^^ ^^^^   ^  ^^ ^^^^  ^^^^^    ^  ^   ^^ ^ ^  ^^^^^^^^^
T:  tgaaagaaatctacaactttaatagggtcgtatgggtctaaatccacagattgacttaac
S:  ..aaaggcgtcagcaagataagaagcgtc.tatggggttag.......ggtcgtccct.c
    ^^    ^^^  ^^   ^^ ^ ^^  ^   ^      ^^  ^^^^^^^^ ^ ^ ^ ^^^^ 
T:  caatatttggctattatgtccgcatttttagggtctgct.ccgctcttataagcatagat
S:  cattttttagatactttgtcta.attgagatgccttataaccgcttttataagcttctac
      ^ ^   ^ ^  ^ ^    ^^^   ^^^ ^ ^^^ ^^^^     ^        ^ ^^ ^
T:  tagagcgttttgttctttttcggtaaagtctttataaaaagcgtctttaaaaggtc
S:  caataattctcgttcatcttgtgtaaagtctttaataaaagcttccttaaaaggtc
    ^ ^^^^^ ^ ^    ^ ^  ^^            ^^      ^  ^          
   31734    31878     23    none    154    145
    Errors = 54
T:  gtagtccgctcgcaatctttttataaatgctgataagattagaactctcaattgtagagc
S:  gtagtccgcttttgattttattgacaatgctattgagattagagctttcaatcgtggaag
              ^^^^  ^  ^  ^^^      ^^ ^        ^  ^     ^  ^  ^^
T:  ctttaatagtcttgtggctcatatcatatttaagtcgtgagatttcatcgccaacagcat
S:  ctttaatagtctcttg.....t.tggtttttaagtcgtgagagttctctgccataagcgt
                ^^  ^^^^^ ^ ^^ ^              ^   ^^^    ^^   ^ 
T:  ctaaaaacttgcttaagggcatcgccttaccaagcaccctaacgctaggtttat
S:  ctaaagtttcgcttaaag..ataag.ttatctttcactctcactctaggtttat
         ^^^ ^      ^ ^^  ^^^^   ^ ^^^   ^  ^  ^          
   31824    31971     25    none     67     70
    Errors = 13
T:  gtctagctaacttcctgtccgctaacgctttatcaatagatgctgtcaaagaagtgtttc
S:  gtctagctaatttcttgtccgctaacgccttatcaatagctgatgtcaaggaagtgttcc
              ^   ^             ^          ^  ^      ^        ^ 
T:  ttttcggctcatcaacaa...attctaaaa
S:  tttgtggctcatcatcaaccaattctaaaa
       ^^         ^   ^^^         
   31868    32018     31    none     19     22
    Errors = 6
T:  taattcaatagcatttt.gtgtcctttttct..aagcgagat
S:  taattcaataacattatcgtgtccttttgctttaagcgagat
              ^    ^ ^          ^  ^^         
   31900    32050     34    none      1      1
    Errors = 1
T:  atctttgagctttcagcgggt
S:  atctttgagccttcagcgggt
              ^          
   31935    32085     67    none      1      1
    Errors = 1
T:  tggtataataccaaaacttca
S:  tggtataatatcaaaacttca
              ^          
   32003    32153     47    none      1      1
    Errors = 1
T:  aagaatgctataacgctatta
S:  aagaatgctacaacgctatta
              ^          
   32063    32213     59    none     13     13
    Errors = 4
T:  ttaaagaggtccgtttcaccttgttgcatgtga
S:  ttaaagaggttcgtttcactctattgcatgtga
              ^        ^^ ^          
   32123    32273     23    none      1      1
    Errors = 1
T:  attatggccagacagaagcct
S:  attatggccaaacagaagcct
              ^          
   32147    32297     56    none      1      1
    Errors = 1
T:  aagaagaaaaagctaaggctt
S:  aagaagaaaaggctaaggctt
              ^          
   32225    32375     29    none     22     22
    Errors = 4
T:  atatagagtgcgagagcgttctaaaaagcggcgatttgattg
S:  atatagagtgtgagagcgttttaaagagcggtgatttgattg
              ^         ^    ^     ^          
   32255    32405     23    none      1      1
    Errors = 1
T:  tggatatggcgaaggattatg
S:  tggatatggctaaggattatg
              ^          
   32300    32450     33    none     22     22
    Errors = 3
T:  tgttattgattggggcgagcgaatctaatttgttgtatcgtt
S:  tgttattgatcggggcgagcgagtctaatttattgtatcgtt
              ^           ^        ^          
   32342    32492     26    none      9      9
    Errors = 3
T:  ccaaaatagcttggttgaacaatccagta
S:  ccaaaatagccttgttgagcaatccagta
              ^ ^     ^          
   32754    32872     24    none    386    354
    Errors = 92
T:  ttgtgatcgccaagtagccaagtagccaaatagcatggataagcggcatgaaaatgtata
S:  ttgtgatcgctaagtagc.............................atgaaaatgcatc
              ^       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^         ^  ^
T:  acatacccacccccaccatggcacaagtgatcatggttgatgaccccattacgacaacgg
S:  aaatacccacccccaccatgtcgcaagtgatcatgcttaatgactccattacgacagcgg
     ^                  ^ ^            ^  ^     ^           ^   
T:  aatttgtcatctctgctttgagggatttttttgacaagtctttagaagaggccaaagccc
S:  aatttatggtttctgctttaagggatttttttgacaagcctttagaagaagctcaaaaac
         ^ ^^ ^        ^                  ^          ^  ^^  ^^^ 
T:  ttacatcaagcatccatcgtgatggtgagggggtttgtggcgtctatccttatgatattg
S:  tcatgctaagcatccatcgtgatggcgatggggtttgtggcgtttatccttatgaaatcg
     ^ ^^^^                  ^  ^              ^           ^  ^ 
T:  ccaggcatagggcggcatgggttagggacaaagccaaagcgttagaattccctttaaaat
S:  ccatatataaggcggtatgcgtgagggacaaagccagagca..aga.ttccctttaagat
       ^^^   ^     ^   ^  ^             ^   ^^^   ^          ^  
T:  tattggtagaagagataaaataatggctaaattcaatcaagatctcaatgaagttctaaa
S:  taatggtacaagaggtaaaataatggacaaattcaataaagatttgaatgaagttttatc
      ^     ^     ^           ^^         ^     ^ ^         ^  ^^
T:  ccaagctttaaatttagccctggatcttaaccacgccctttgcacc
S:  tcatgctttagatttagccctagattttaaccatgtcctttgcacc
    ^  ^      ^          ^   ^       ^ ^          
   32974    33092     29    none    196    196
    Errors = 52
T:  agcatgtgctactagtcattttagaacatgagagcggggaaaagattattggcactttag
S:  agcatgtgctgttagccattttagagcatgggattggaataaggatttttaatactttag
              ^^   ^         ^    ^  ^^  ^^^  ^    ^  ^^^       
T:  aaagagatgactatgataaattaaaacaaatccttaaagactatttgttgcaatatgtgc
S:  aagaagatggctaccataaaatggagcaaatccttaaagactacttgcaacaatacattc
      ^^     ^   ^^     ^ ^^ ^                 ^   ^^^     ^^ ^ 
T:  ctttaaagagcgatccagccaaaatgcctgctaggagttttgtgctattaagaatgctta
S:  ctttaaaaaacgatccaaccaaaataccagacaggagtcccgtattagcaagagtgttta
           ^ ^       ^       ^  ^ ^^      ^^^  ^^  ^^    ^  ^   
T:  aaagaatgtatgcgagttgttttgagagcgtgggcg
S:  aaaaaatgtatgcgagttacttggatagcgtgggcg
       ^              ^^  ^  ^          
   33019    33137     21    none     16     16
    Errors = 8
T:  tgcttattttaatgctagatcaccccgattgttacg
S:  tgcttattttcattttagaatacgatgattgttacg
              ^  ^^    ^^  ^^^          
   33125    33246     21    none     85     88
    Errors = 22
T:  ttcaaaactcatggatagttttggcatcgctcgtttgtattctaatcctgctttattgga
S:  ttcaaaactcctggatagttttggcatcactcgttcgtatttcaagtccgctttattgga
              ^                 ^      ^     ^^  ^^ ^           
T:  tttggataacc...atggtattcctaatgacattaatgataatgaaga
S:  ttttgataaccctaatgatattaatgataacgacattaataatgaaga
       ^       ^^^   ^    ^^ ^  ^  ^^^ ^ ^          
   33196    33317     47    none     50     50
    Errors = 6
T:  gcgcccaaaaacactcccttaaaaaaatacgctaaaaatttgagcgctttagcccaagac
S:  gcgcccaaaagcactcccctaaaaaaatacactaaaaacttgagcgctttagcccaaaat
              ^       ^           ^       ^                  ^ ^
T:  aacgctttag
S:  aacgctttag
              
   33265    33386     47    none     22     22
    Errors = 3
T:  ttttaagagtgatagaaattttagggcgcagaaaaaagaata
S:  ttttaagagtcatcgaaattttagggcgcaggaaaaagaata
              ^  ^                 ^          
   33313    33434     68    none      1      1
    Errors = 1
T:  tagggaaaacctccatcgctg
S:  tagggaaaacttccatcgctg
              ^          
   33412    33533     32    none     31     31
    Errors = 5
T:  aagaatatgaagtctattctttggatttagccttaatggtggctggggcaa
S:  aagaatatgaggtttattctttggatttggctttaatggtagctggggcaa
              ^  ^              ^  ^        ^          
   33475    33596     50    none     31     31
    Errors = 4
T:  attttgaaaaacgcttgaaaaaaacgctcaaagaaatccaacaaaacggcc
S:  attttgaaaagcgcctgaaaaaaacgctcaaagagatccagcaaaacggcc
              ^   ^                   ^     ^          
   33527    33648     79    none      2      2
    Errors = 2
T:  cccttttaggcacagggagcag
S:  cccttttaggtgcagggagcag
              ^^          
   33610    33731     50    none      4      4
    Errors = 2
T:  tgaaatgtttaggagcgaccactt
S:  tgaaatgtttgggggcgaccactt
              ^  ^          
   33706    33827     20    none     46     46
    Errors = 11
T:  acaaggcttttaataggcgtttttcagtcataaaagttgaagagccttctaaagaggcgt
S:  acaaggctttcaacaggcgcttttctatagtgaatgttgaagagccttctaaggaagcgt
              ^  ^     ^     ^^ ^^ ^  ^                 ^  ^    
T:  gttact
S:  gttact
          
   33736    33857     33    none     10     10
    Errors = 4
T:  tgattttaaaaaagatcgctcccctttatg
S:  tgattttaaagaatattgcccccctttatg
              ^  ^  ^  ^          
   33775    33896     26    none      6      6
    Errors = 2
T:  ggtgcgttatgatgagagcgtgttta
S:  ggtgcgttataatgaaagcgtgttta
              ^    ^          
   33809    33930     31    none      8      8
    Errors = 3
T:  gcgtggatttaacgagtgattacatgca
S:  gcgtggatttgacgagctattacatgca
              ^     ^^          
   33841    33962     29    none      1      1
    Errors = 1
T:  tgccggataaagcgattgaat
S:  tgccggataaggcgattgaat
              ^          
   33940    34061     26    none     70     70
    Errors = 8
T:  aggtgggatcgaggaaaaaaatcagccctaaaaagggcaaaaaaatcggcgttgatgatg
S:  aggtgggatcaaggaaaaagatcaaccctaaaaaaggcaaaaaaatcagcgttgatgacg
              ^        ^    ^         ^            ^          ^ 
T:  tgaaagaaacgctcgctctaaagcttaaaa
S:  tgcaagaaacgctcgctctcaagcttaaaa
      ^                ^          
   33976    34097     35    none     10     10
    Errors = 3
T:  aaatgcgtttgagcagcgacaaaaaagccc
S:  aaatgcgtttaaacagcgataaaaaagccc
              ^ ^      ^          
   34012    34133     21    none      1      1
    Errors = 1
T:  aaaaatcgcttaaaaataaga
S:  aaaaatcgctaaaaaataaga
              ^          
   34066    34187     74    none     33     33
    Errors = 5
T:  ttttgcccaagcagaagcgatcagtcttgtcagcaatgcgattaaaatccagc
S:  ttttgcccaaaccgaagcgatcaaccttgtcagcaatgcgatcaaaatccagc
              ^ ^          ^^                 ^          
   34141    34262     98    none      1      1
    Errors = 1
T:  ctagtggggtggggaaaacag
S:  ctagtggggtagggaaaacag
              ^          
   34249    34370     26    none     10     10
    Errors = 2
T:  gcgtggcaaaactcatcgggagtcctagcg
S:  gcgtggcaaagctcatcggaagtcctagcg
              ^        ^          
   34276    34397     32    none      1      1
    Errors = 1
T:  tggggtttgaacaaggggggt
S:  tggggtttgagcaaggggggt
              ^          
   34309    34430     38    none      1      1
    Errors = 1
T:  cgattaaaaaacacccgcatt
S:  cgattaaaaagcacccgcatt
              ^          
   34360    34481     20    none     13     13
    Errors = 4
T:  agatagaaaaagcccattctaacgtgtatgatt
S:  agatagaaaaggcccaccctaatgtgtatgatt
              ^     ^^    ^          
   34381    34502     38    none      1      1
    Errors = 1
T:  tgttgttgcaagtgatggata
S:  tgttgttgcaggtgatggata
              ^          
   34421    34542     22    none      2      2
    Errors = 2
T:  atttaggcaatcaggcgagttt
S:  atttaggcaacaaggcgagttt
              ^^          
   34445    34566     37    none      2      2
    Errors = 2
T:  agcatgtgattttgattatgac
S:  agcatgtgatactgattatgac
              ^^          
   34564    34685     62    none     82     82
    Errors = 8
T:  aggataaggatacgctagggttttttagcgctaaaaacaccaagtatgataaagccgtta
S:  aggataaggacacgctagggttttttagcactaaaaacgccaagtatgatagagccgtta
              ^                  ^        ^            ^        
T:  aagagcttttgacccctgaattacgctccaggattgatgcga
S:  aagagcttttaacccctgaattgcgatccagaattgatgcga
              ^           ^  ^     ^          
   34627    34748     26    none      1      1
    Errors = 1
T:  ttgtttctgtagaattagaca
S:  ttgtttctgtggaattagaca
              ^          
   34671    34792     29    none     18     18
    Errors = 5
T:  aagccctagcgctagagcaagacataaccttaaaattc
S:  aagccctagcactagagcaaggcgtgatcttaaaattc
              ^          ^ ^ ^ ^          
   34714    34835     62    none     14     14
    Errors = 2
T:  gttgtgaaattcatcgcgcaaaaaagctaccaaa
S:  gttgtgaaatgcatcgcgcaaaagagctaccaaa
              ^            ^          
   34778    34899     22    none      2      2
    Errors = 2
T:  aaatcaaaactaaattaagcga
S:  aaatcaaaacccaattaagcga
              ^^          
   34801    34922     35    none      1      1
    Errors = 1
T:  tactgctcttgcaatcgttta
S:  tactgctcttacaatcgttta
              ^          
   34879    35000     63    none     43     43
    Errors = 5
T:  tcgcttgcttgctagaaaaaaaccaattggttttaaaagaaatcaagcgcgcgcaaaagg
S:  tcgcttgcttattggaaaaaaaccaattggttctaaaagaaatcaagcgcgcacaaaagg
              ^^ ^                  ^                   ^       
T:  tga
S:  tga
       
   34943    35064     59    none      1      1
    Errors = 1
T:  cgactatcacggacgctaatc
S:  cgactatcacagacgctaatc
              ^          
   35003    35124     23    none      1      1
    Errors = 1
T:  ccaagctcgccaagctcagag
S:  ccaagctcgctaagctcagag
              ^          
   35027    35148     20    none      1      1
    Errors = 1
T:  gcatgaaagtagaaatcgtgg
S:  gcatgaaagtggaaatcgtgg
              ^          
   35048    35169     45    none      1      1
    Errors = 1
T:  atgtcaataatggcgaacgct
S:  atgtcaataacggcgaacgct
              ^          
   35102    35223     41    none      9      9
    Errors = 2
T:  aaaaaggggcgaaatttgcgtcaatggtg
S:  aaaaaggggcaaaatttgtgtcaatggtg
              ^       ^          
   35144    35265     44    none      1      1
    Errors = 1
T:  taggcgatgtagtgatcattt
S:  taggcgatgtggtgatcattt
              ^          
   35207    35328     70    none     19     19
    Errors = 5
T:  atgaaatcaacgcacacaagccgagcatcgtgctagtgg
S:  atgaaatcaatacgcacaagccaagcattgtgctagtgg
              ^^ ^        ^     ^          
   35288    35418    214    none     11     20
    Errors = 10
T:  tgggcgggtt......gtta...gacggcatgaaaaaaga
S:  tgggcgggttaagcgggttattagacggcgtgaaaaaaga
              ^^^^^^    ^^^      ^          
   35503    35633     20    none      1      1
    Errors = 1
T:  aaaaccgaaaaaatttagcct
S:  aaaaccgaaagaatttagcct
              ^          
   35539    35669     88    none     16     16
    Errors = 3
T:  ttaacatgctggggaattttgctaaattgtgatgtt
S:  ttaacatgctagggaattttgccaagttgtgatgtt
              ^           ^  ^          
   35631    35761     29    none      4      4
    Errors = 2
T:  agcattgtcaagcgttttttaaaa
S:  agcattgtcaggctttttttaaaa
              ^  ^          
   35688    35818     20    none     28     28
    Errors = 3
T:  ttcaaaaaggaggcgtggctttaaaagaattgcctaaaggcgtgtatt
S:  ttcaaaaagggggcgtggctttaaaggaattgcctaagggcgtgtatt
              ^              ^           ^          
   35730    35860     20    none     22     22
    Errors = 3
T:  tgtattattccaaaacctatcccaaacacgccaaagtcatca
S:  tgtattattctaaaacctaccccaaacacgctaaagtcatca
              ^        ^           ^          
   35781    35911     20    none     31     31
    Errors = 4
T:  aatccgatccctttgtagggttgtatttgttgcaaagcgcaccaagcgagt
S:  aatccgatccttttatagggctgtatttgttgcaaagcgcgccaagcgagt
              ^   ^     ^                   ^          
   35802    35932     32    none      1      1
    Errors = 1
T:  atgtttataccttaagggatt
S:  atgtttatacattaagggatt
              ^          
   35931    36061     29    none     97     97
    Errors = 16
T:  cccttataaggccaatggctagcataggggataaagaagccctagaaacgcgattattgg
S:  cccttataagacccatggccagtataggggctaatcaagccacagaagcgcgattattgg
              ^  ^     ^  ^       ^   ^^     ^^    ^            
T:  tggggcaaagaggctatgagcgctacgctcaaatttcgcaaaagactcaaaaaaatg
S:  tagggcaaaaaggctatgaccgctacgctcaaatttcacaaaaaacccaaaaaaatg
     ^       ^         ^                 ^     ^  ^          
   35971    36101     22    none     11     11
    Errors = 2
T:  gcaatatttgctatcaaatgttagggctagg
S:  gcaatatttgttatcaaatgctagggctagg
              ^         ^          
   35994    36124     20    none      1      1
    Errors = 1
T:  taggggggaatggctttatag
S:  taggggggaacggctttatag
              ^          
   36015    36145     20    none      1      1
    Errors = 1
T:  aaacgaaatttatcaagcgct
S:  aaacgaaattcatcaagcgct
              ^          
   36036    36166     43    none      1      1
    Errors = 1
T:  ttttaaaccagcaagagcctt
S:  ttttaaaccaacaagagcctt
              ^          
   36114    36244     50    none     35     35
    Errors = 4
T:  ttagaagaacatcataagcgtttagtggtagtgcaatttgatccatttttcccta
S:  ttagaagaacgtcataagcgtttggtggtagcgcaatttgatccctttttcccta
              ^            ^       ^            ^          
   36183    36313     33    none     19     19
    Errors = 5
T:  tagcgatcaaccatcaaaagatccactcattagcggagt
S:  tagcgatcaatgattacaagatccactcgttagcggagt
              ^^  ^ ^           ^          
   36262    36392     28    none     46     46
    Errors = 7
T:  gagcaatcttaaataccaaagccttgcaaaagtggaaatcaaacgaaaccataaagtcaa
S:  gagcaatctttcataccaaagcctcgccaaagtgaaaatcaaacgaaaccatcaaatcaa
              ^^            ^  ^      ^                 ^  ^    
T:  agaagt
S:  agaagt
          
   36309    36439     41    none     19     19
    Errors = 3
T:  aagtcaataagcgttatggggggtttttactcaaagaca
S:  aagtcaataaacgctatggggggtttttgctcaaagaca
              ^  ^              ^          
   36363    36493     75    none     13     13
    Errors = 2
T:  tcgctttagatgagcgttttattatcactaaaa
S:  tcgctttagacgagcgttttatcatcactaaaa
              ^           ^          
   36465    36595     21    none     27     27
    Errors = 6
T:  atgggtgaattataaaagcgtggcgtccaacccaaaggctttaagag
S:  atgggtgaatcataaaagcgtttcgttcaacccgaaagctttaagag
              ^          ^^   ^      ^  ^          
   36487    36617     24    none      1      1
    Errors = 1
T:  agcgttaagcgcgcctaaaat
S:  agcgttaagcacgcctaaaat
              ^          
   36517    36647     33    none      6      6
    Errors = 2
T:  ttattagtcttgcgtaaaggctttga
S:  ttattagtctggcgtcaaggctttga
              ^    ^          
   36580    36710     29    none     30     30
    Errors = 4
T:  gtccgttgaagtattgatgaaaaatgacgcttatgaaattattctttctt
S:  gtccgttgaaacattgatgaaacatgacgcttatgaaatcattctttctt
              ^^          ^                ^          
   36610    36740     29    none      1      1
    Errors = 1
T:  cgcctctcacggcgattttag
S:  cgcctctcacagcgattttag
              ^          
   36649    36779     28    none     10     10
    Errors = 2
T:  ctgaattttttctctacactttgcatgcgc
S:  ctgaatttttcctctacaccttgcatgcgc
              ^        ^          
   36678    36808     30    none      1      1
    Errors = 1
T:  tttaatagcgtggtcgctttg
S:  tttaatagcgcggtcgctttg
              ^          
   36709    36839     23    none      1      1
    Errors = 1
T:  tctttgcttataggagtttga
S:  tctttgcttacaggagtttga
              ^          
   36832    36962     33    none    100    100
    Errors = 17
T:  aacagaatttcttcagcgctagcgcgctaacagaagcgttattgtttgtggggttttttg
S:  aacagaattttttcagtgctagcgcgcttttagaagcgttatggtttgtggggttttttg
              ^     ^           ^^^           ^                 
T:  cacttttcaactacgctttaaaaaatcccatgcatttttatgaatttttccaaaacgcta
S:  cgctgtttaactacgctttgaaaaatccttcgcgcttttatgaattgtttcaaaacgcta
     ^  ^  ^           ^        ^^^  ^^           ^  ^          
   36877    37007     24    none     12     12
    Errors = 3
T:  taacatgatcgcgcaaagcctctctcaaagct
S:  taacatgatcactcaaagcctttctcaaagct
              ^ ^        ^          
   36907    37037     20    none      6      6
    Errors = 2
T:  taacttttctgaccatgcgctttctt
S:  taacttttctaaccacgcgctttctt
              ^    ^          
   36928    37058     26    none      1      1
    Errors = 1
T:  tagattttatctttaatcatg
S:  tagattttatttttaatcatg
              ^          
   36961    37091     26    none      7      7
    Errors = 2
T:  atgcccttagtttcatcagcgatttga
S:  atgcccttagcttcattagcgatttga
              ^     ^          
   37017    37147     24    none     30     30
    Errors = 3
T:  atgaaatgtctgtgtggctttttttaagcgttttgcaagggctttttttg
S:  atgaaatgtccgtgtggctttttttaagcattttgcaagcgctttttttg
              ^                  ^         ^          
   37042    37172     20    none      1      1
    Errors = 1
T:  tgctgtttgcaatcatcattt
S:  tgctgtttgcgatcatcattt
              ^          
   37068    37198     23    none      6      6
    Errors = 2
T:  tagtgtatttagaagtgcatgtgtgg
S:  tagtgtatttggaagcgcatgtgtgg
              ^    ^          
   37093    37223     23    none      2      2
    Errors = 2
T:  tctttaggggtgctgtttttag
S:  tctttaggggcactgtttttag
              ^^          
   37117    37247     32    none      1      1
    Errors = 1
T:  ttgggttttttaaaacctgga
S:  ttgggtttttcaaaacctgga
              ^          
   37156    37286     38    none      7      7
    Errors = 2
T:  ttatatgcctaaaaaagtgcttcgctc
S:  ttatatgccttaaaaaatgcttcgctc
              ^     ^          
   37198    37328     29    none      4      4
    Errors = 2
T:  ttttgttgttggtagggtttttga
S:  ttttgttgttagtggggtttttga
              ^  ^          
   37243    37373     38    none     16     16
    Errors = 5
T:  ttactaaggctttaatagacgctcatatgcaagaaa
S:  ttactaaggcgttaatggacgctagcatgcaagaaa
              ^     ^      ^^^          
   37282    37412     32    none      1      1
    Errors = 1
T:  tattggtggtagcgttatttt
S:  tattggtggtggcgttatttt
              ^          
   37315    37445     77    none      1      1
    Errors = 1
T:  ttatcatcggcgtgccttttt
S:  ttatcatcggtgtgccttttt
              ^          
   37498    37628     20    none    106    106
    Errors = 30
T:  ccaatttgagtgccaacctcagccaaaacgcccttaattccttacaatacatcacgaccc
S:  ccaatttgagcgctaacctcactcaaagcgctttccaatctttacagcatgccacgacct
              ^  ^       ^^    ^   ^^ ^^ ^  ^     ^^ ^^^       ^
T:  cacccgcttcttctagcgtttcttcttctatgagtgaaagcgtctctaaagaaaaagaaa
S:  cgcccgctccttctcatatttcctcttctgcaagtcaaagcgtttctaaagaaaaggaaa
     ^      ^     ^^^^    ^      ^^^   ^       ^           ^    
T:  cgcatt
S:  cgcatt
          
   37519    37649     72    none      1      1
    Errors = 1
T:  cccccacatttaaggtagaaa
S:  cccccacattcaaggtagaaa
              ^          
   37592    37722     40    none      1      1
    Errors = 1
T:  ggatacaataaatacaaaaaa
S:  ggatacaatagatacaaaaaa
              ^          
   37633    37763     29    none      1      1
    Errors = 1
T:  atttaatgagaattttttttg
S:  atttaatgaggattttttttg
              ^          
   37663    37793     44    none      1      1
    Errors = 1
T:  gacttgtgttttttggttgca
S:  gacttgtgttgtttggttgca
              ^          
   37715    37844     37    none      8      7
    Errors = 3
T:  aaagcccttgcacattgttatgaaaaca
S:  aaagcccttgtaccttgt.atgaaaaca
              ^  ^    ^         
   37794    37923     21    none     42     42
    Errors = 7
T:  aagaaaagcctttcaatagcgagcagttgatctatttagaagagcttttaaaccaccaag
S:  aagaaaagccgttcaatagcgagcagatggcttttttagaagagcttttaagccaccaag
              ^               ^  ^^^ ^                 ^        
T:  aa
S:  aa
      
   37818    37947     48    none      3      3
    Errors = 2
T:  agcatttagaaaacaagctttct
S:  agcatttagagagcaagctttct
              ^ ^          
   37876    38005     23    none     10     10
    Errors = 5
T:  aaagcgtgttcagactggagaggaaccgct
S:  aaagcgtgtttcggctagaaaggaaccgct
              ^^ ^  ^  ^          
   37960    38089     44    none     61     61
    Errors = 11
T:  aaatcgcttataaactcttaggcttgatgagttttatcgctcttgttttagcgatcgtgt
S:  aaatcgcttacaggcttttaggtttgatgagctttatcgcgcttgtcttagcgatcgttt
              ^ ^^  ^     ^        ^        ^     ^           ^ 
T:  taatcagtgttctgcccttac
S:  taatcagtatcctgcccttac
            ^ ^          
   38005    38134    104    none      1      1
    Errors = 1
T:  attttttaaatcaggacaagc
S:  attttttaaaccaggacaagc
              ^          
   38164    38293     36    none     55     55
    Errors = 5
T:  accgagagagtattaaccgcattgacgataaatcgcgctatgaattggtgcgcttgcaaa
S:  accgagagagcattaatcgcattgacgataaatcccgctatgaactggtgcgcttgcaaa
              ^     ^                 ^         ^               
T:  gcagttctaaagtgt
S:  gcagctctaaagtgt
        ^          
   38233    38362     65    none     33     33
    Errors = 3
T:  tttgattaaaacccaaaacagcatttatgtgcaaagccatttggaaagagaag
S:  tttgattaaagcccaaaacagcatctatgtgcaaagccatttagaaagagaag
              ^             ^                 ^          
   38299    38428     23    none      1      1
    Errors = 1
T:  ttgcgagcgtctccattgcgg
S:  ttgcgagcgtgtccattgcgg
              ^          
   38335    38464     32    none     13     13
    Errors = 3
T:  aacttttgaacgaaaacaagttggtgtatgaaa
S:  aacttttgaatgaaaacaagctcgtgtatgaaa
              ^         ^ ^          
   38368    38497     56    none      1      1
    Errors = 1
T:  tcgtattgagttatttgtttg
S:  tcgtattgagctatttgtttg
              ^          
   38469    38604     29    none     45     51
    Errors = 11
T:  accctaccggatttaaaatcacccgttacagcatcactgaaatc......actaataggg
S:  accctaccggctttaaaatcactcgctacagcatcactgaaatcgcgccgactaatagga
              ^           ^  ^                  ^^^^^^         ^
T:  gtgattgatgc
S:  atgattgatgc
    ^          
   38523    38658     47    none     25     25
    Errors = 4
T:  tatacgctcttgtgggctttttgttggcttttagcgctttaaaag
S:  tatacgctctcatgggctttttgttggtttttagtgctttaaaag
              ^^               ^      ^          
   38589    38724     50    none     19     19
    Errors = 3
T:  aaacagccccggcgcatttaaaccaccctatgcaggatt
S:  aaacagccccagcgaatttaaaccaccccatgcaggatt
              ^   ^             ^          
   38640    38775     55    none      1      1
    Errors = 1
T:  aaaaccgctcaaaaatgtcca
S:  aaaaccgctccaaaatgtcca
              ^          
   38696    38830     22      -2      1      0
    Errors = 1
T:  cttataaaatcccgcttgcgtta
S:  cttataaaatcc.gcttgcgtta
                ^          
   38719    38853     38    none      1      1
    Errors = 1
T:  cgatggcgaccttattgtttt
S:  cgatggcgactttattgtttt
              ^          
   38758    38892     41    none      1      1
    Errors = 1
T:  attttgttttaggggataagg
S:  attttgttttgggggataagg
              ^          
   38833    38967     31    none     34     34
    Errors = 6
T:  tagaaagcaacgatcgtattttgcttatcaaacccctacaaattggcgtggatt
S:  tagaaagcaatgatcgcattttactcatcaaacccttacaaatcggcgtggatt
              ^     ^     ^  ^         ^       ^          
   38866    39000     65    none      2      2
    Errors = 2
T:  gtgattgataatgagggtaaga
S:  gtgattgatagcgagggtaaga
              ^^          
   38932    39066     23    none      1      1
    Errors = 1
T:  accctaatttgcaggttttta
S:  accctaatttacaggttttta
              ^          
   38999    39142     24    none     44     53
    Errors = 15
T:  aagataaaaattattattctaacgcttttttgaagccccaaaaagaaaat.........a
S:  aagataaaaactattacactaacgcttttatcaagccccaaaaagaaaatcaagaaaata
              ^     ^^           ^ ^                  ^^^^^^^^^ 
T:  tggctgaaaatgc
S:  tgtctgaaaatgc
      ^          
   39041    39184     22    none     18     18
    Errors = 7
T:  aaagatgcccccacaaacaacaaacccttaaaagaaga
S:  aaagatgcccaaaaaaataataagcccctaaaagaaga
              ^^ ^   ^  ^  ^   ^          
   39064    39207     25    none      1      1
    Errors = 1
T:  aagaagaaaccaaagaaaaag
S:  aagaagaaactaaagaaaaag
              ^          
   39136    39279     51    none     47     47
    Errors = 7
T:  gagactataactattggcgataacactaatgccatgaaaatcgttaaaaaagacattcaa
S:  gagactataattattggcgataacaccaacgcgatgaaaattattaaaaaagacatccaa
              ^               ^  ^  ^        ^^             ^   
T:  aaaggct
S:  aaaggct
           
   39235    39378     47    none     48     48
    Errors = 7
T:  gtattgtttagggatttgttctaaaaagtccaaactctctttgatgcctaaagaaatttt
S:  gtattgtttatgggcttgttctaaaaaatccaaactctccttaatgcctaaagaaatctt
              ^  ^^            ^           ^  ^              ^  
T:  taacgaca
S:  taacgaca
            
   39283    39426     47    none      1      1
    Errors = 1
T:  aaagattagcgctctctaaat
S:  aaagattagcactctctaaat
              ^          
   39331    39474     50    none      1      1
    Errors = 1
T:  gctatgataacccggtgaata
S:  gctatgataatccggtgaata
              ^          
   39471    39614     30    none     90     90
    Errors = 15
T:  aagacgtttcggctaaatggactttaaggctgggcaaggactatttgtgcatccgttttg
S:  aagacgtttctactaaatggactttaaggttgggtaaggattatctgtgtatccgttttg
              ^^                 ^    ^     ^   ^    ^          
T:  tcaaaaaggctaaagatgaataagtggcttaagggggcgattgtttttgt
S:  tcaaaaggcgcaaaggtgaataagtggattaaaggggcggttgtttttgt
          ^ ^^^    ^           ^    ^      ^          
   39543    39686     22    none     42     42
    Errors = 5
T:  gcaacgattataaccatttctttaatctatcatcaaaagccaaaagcccccttaaataac
S:  gcaacgattacaaccttttctttaatctaccaccaaaagccaaaagcccccctaaataac
              ^    ^             ^  ^                  ^        
T:  ca
S:  ca
      
   39566    39709     68    none      1      1
    Errors = 1
T:  ctagccttttaaatgacgatg
S:  ctagccttttgaatgacgatg
              ^          
   39635    39778     83    none      1      1
    Errors = 1
T:  caactaacacagaaagctcca
S:  caactaacacggaaagctcca
              ^          
   39774    39912     22    none     56     51
    Errors = 16
T:  aagaaatgaaccattctaaagaagaaacttttaagaaccctcccatagatttaaagcaaa
S:  aagaaatgaattattccaaagaagagacttttactagccctcccatggatc.....caaa
              ^^    ^        ^       ^^ ^         ^   ^^^^^^    
T:  cacaaacccccctaaa
S:  aacaaccccccctaaa
    ^    ^          
   39845    39983     34    none     49     49
    Errors = 8
T:  agacttttcttcaaagcaatgggatttactagccgctcgcatcacccctttcaaacaagg
S:  agacttttctccaaaacaattagatttactggcctctcgcatcacccctttcaagcaaag
              ^    ^    ^^        ^   ^                   ^   ^ 
T:  ccctaaaaa
S:  ccctaaaaa
             
   39910    40048     38    none     31     31
    Errors = 5
T:  tgattttccccatggataaccctaaaggcattgatggttttactaacctta
S:  tgattttccctgtggataaccctaatggcattgatagtttcactaacctta
              ^^             ^         ^    ^          
   39949    40087     23    none      1      1
    Errors = 1
T:  ctaatgaaaataagcttttac
S:  ctaatgaaaacaagcttttac
              ^          
   40006    40144     26    none     34     34
    Errors = 7
T:  ccattacagcggataaaatgatacccgcctttctcatcacgcctatttctagcc
S:  ccattacagctgacaaaatgatacccgcttttttgattacgcccatttctagcc
              ^  ^              ^   ^ ^  ^     ^          
   40042    40180     20    none     10     10
    Errors = 3
T:  ctggtaaagtcatcgcgcaggtggagagcg
S:  ctggtaaagtgattgcgcaagtggagagcg
              ^  ^     ^          
   40075    40213     35    none     13     13
    Errors = 4
T:  atatttttgctcacatgggcaaggccgtcttaa
S:  atatttttgcaagcatgggcaaagccgtcttaa
              ^^^         ^          
   40111    40249     53    none      1      1
    Errors = 1
T:  aagtcataggttattacagca
S:  aagtcataggctattacagca
              ^          
   40168    40306     20    none      4      4
    Errors = 2
T:  ttgtatggagccgcatcatcactc
S:  ttgtatggagtcgaatcatcactc
              ^  ^          
   40189    40327     53    none      1      1
    Errors = 1
T:  cccatggcatcaatatcatgc
S:  cccatggcattaatatcatgc
              ^          
   40243    40381     29    none      1      1
    Errors = 1
T:  ataacggcttggtgggggaat
S:  ataacggcttagtgggggaat
              ^          
   40273    40411     29    none      1      1
    Errors = 1
T:  ggaatttccagcgctatggcg
S:  ggaatttccaacgctatggcg
              ^          
   40303    40441     61    none      1      1
    Errors = 1
T:  tgctttctactctcactaacg
S:  tgctttctacgctcactaacg
              ^          
   40372    40510     24    none      8      8
    Errors = 5
T:  aataaagaaggagccaccaatttctttg
S:  aataaagaagaggtgactaatttctttg
              ^^ ^^  ^          
   40397    40535     40    none      1      1
    Errors = 1
T:  ttatcttttaatgcaattgat
S:  ttatcttttattgcaattgat
              ^          
   40438    40576     20    none      1      1
    Errors = 1
T:  tcaatcaagtagtcaatcaaa
S:  tcaatcaagtggtcaatcaaa
              ^          
   40495    40633     38    none     37     37
    Errors = 5
T:  ttttaagagataagagcaaaatcgctcctattgtggtgattagagaagggagtaggg
S:  ttttaagagacaagagcaagatcgcccccattgtggtgattagagaggggagtaggg
              ^        ^     ^  ^                 ^          
   40534    40672     57    none      1      1
    Errors = 1
T:  ctgacatctttttccctatac
S:  ctgacatcttcttccctatac
              ^          
   40597    40735     41    none      6      6
    Errors = 4
T:  actcaaaaatccccaattaaaaacgc
S:  actcaaaaatgccagtttaaaaacgc
              ^  ^^^          
   40690    40828     59    none     52     52
    Errors = 8
T:  aagagagcctgacaagaaaacgcatgaaaattaaaaatatcttactgagtggggggagcg
S:  aagagagcctagcaagaaagcccatgaaaattaaaaatgtcttattgagtggggggagtg
              ^^       ^ ^                ^     ^             ^ 
T:  ggaaacgcctat
S:  gcaaacgcctat
     ^          
   40768    40906     44    none     19     19
    Errors = 2
T:  agctttttgaccataaaagcttgtttgaattgagtttta
S:  agctttttgatcataaaagcttgtttgagttgagtttta
              ^                 ^          
   40813    40951     29    none      1      1
    Errors = 1
T:  aaacgctcattgtgtgcaatg
S:  aaacgctcatcgtgtgcaatg
              ^          
   40876    41014     20    none     34     34
    Errors = 5
T:  attttttagccctagaagagataaagaatgaaatcaaaaacaaaagcgtgggtt
S:  attttttagctctagaagaaataaaaaacgaaatcaaaaacaagagcgtgggtt
              ^        ^     ^  ^              ^          
   40900    41038     26    none      4      4
    Errors = 2
T:  ttttattagagagcttgagtaaaa
S:  ttttattagaaagtttgagtaaaa
              ^  ^          
   40927    41065     60    none      1      1
    Errors = 1
T:  ctaacgccatcgctttgagcg
S:  ctaacgccattgctttgagcg
              ^          
   41086    41224     77    none     99     99
    Errors = 12
T:  aagcgatcatttgattaaagaccttcaagcgtatgaaaacgcgataaaaaaagcgattga
S:  aagcgatcatctgattaaagactttcaagcgtatgaaaatgcgataaaaaaagcgattaa
              ^           ^                ^                  ^ 
T:  tctagcccaaaaaggttttttagtcacttttggggtgagtattgacaagcccaacacgg
S:  tttagctcaaaaaggctttttagtcacttttgggattagcattgaaaaacccaacacgg
     ^    ^        ^                  ^ ^  ^     ^  ^          
   41164    41302     26    none      1      1
    Errors = 1
T:  caagcctagacaaagcgatag
S:  caagcctagaaaaagcgatag
              ^          
   41209    41347     56    none     19     19
    Errors = 3
T:  aaaaaagcgggggtttttatttcaatagcggcatgtttg
S:  aaaaaagcggagggttttatttcaatagtggcatgtttg
              ^  ^              ^          
   41338    41476    151    none     73     73
    Errors = 7
T:  agcatgcccccactattttaaaggggtgtgaaagagcgtttgaatctttagaaaacgcgt
S:  agcatgcccctactattttaaaggggtgcgaaagagcgtttgaatccttagaaaacacgc
              ^                 ^                 ^         ^  ^
T:  atttttttgaaaaaaagatcgctcgtttgagcg
S:  atttttttgaacaaaagatcgcgcgtttgagcg
               ^          ^          
   41544    41682     42    none     55     55
    Errors = 8
T:  gcggctaacgagcctaaagaaaatgtcagcttgaatcaaacgcctgtttttgccaaagaa
S:  gcggctaacggcactaaagaaaatgtcagcctgaatcaaacgcctatttttgccaaagag
              ^^^                 ^              ^             ^
T:  agcgaaaataattta
S:  agcacaaataattta
       ^^          
   41605    41743     24    none     19     19
    Errors = 4
T:  ctcttttaggcgttgagaatttagcggttattgacacta
S:  ctcttttaggggttgaggatttagcgatcattgacacta
              ^      ^        ^ ^          
   41704    41842     35    none     75     75
    Errors = 9
T:  cgctcttttaatcgctcataaagacaaggctaaggatttaaaagctttagtgaacgaggt
S:  cgctcttttagtcgctcataaagacaaagctaaggatttaaaagccctagtgagcgagat
              ^                ^                 ^^      ^    ^ 
T:  agaaacaaacaaccaagaattgttgcaaacgcaca
S:  agaaacacacaaccaagaattattacaaacgcaca
           ^             ^  ^          
   41740    41878     62    none      1      1
    Errors = 1
T:  cttgggggagttatgaagtct
S:  cttgggggagctatgaagtct
              ^          
   41815    41953     32    none     13     13
    Errors = 2
T:  aaccaaacgcaaggctttctttacaaaagcatt
S:  aaccaaacgctaggctttctttgcaaaagcatt
              ^           ^          
   41848    41986     26    none      1      1
    Errors = 1
T:  aacactgggtagtgattagcg
S:  aacactgggtggtgattagcg
              ^          
   41889    42027     46    none     15     15
    Errors = 3
T:  cgagcgtggagttggatcaccagttgtttgaattg
S:  cgagcgtggaattggatcaccaatcgtttgaattg
              ^           ^ ^          
   41986    42124     20    none     51     51
    Errors = 7
T:  taaaaacaccctacaccgcctggctaattacggcaagatccctttaattatcatagaagt
S:  taaaaacaccttacaccgcctagctaattatggcaaaatccctttgattatcatagaggt
              ^          ^        ^     ^        ^           ^  
T:  tcaagtgggcg
S:  ccaagtgggcg
    ^          
   42072    42209     28    none     66     65
    Errors = 10
T:  agtatgtcggtgaagacgatattgtgcgcattgatgatgattttaacagacaaaatcaaa
S:  agtatgtcggcgaagacgatattgtaagggttgatgacgattttaacagacagaatcaaa
              ^              ^^ ^^       ^              ^       
T:  acgcctaataaagaaaatttaataaa
S:  acgcctaatgaa.aagatttaataaa
             ^  ^  ^          
   42101    42238    145    none      1      1
    Errors = 1
T:  aataaaggaaaaataatgaaa
S:  aataaaggaacaataatgaaa
              ^          
   42291    42428     29    none     45     45
    Errors = 5
T:  gatcgatcatctgtatgaagatttgcatagcgatcataaaaggcgttttttcttacacta
S:  gatcgatcatttgtatgaagatttgcacagcgaacacaaaaggcgttttttcttgcacta
              ^                ^     ^  ^                 ^     
T:  tgggg
S:  tgggg
         
   42351    42488     23    none     31     31
    Errors = 4
T:  atagctctaatcttatccatttaatcgctaccactaagcctacagagattt
S:  atagctctaacctcatccatttgatcgctaccactaagcccacagagattt
              ^  ^        ^                 ^          
   42387    42524     20    none     13     13
    Errors = 2
T:  atttagccgctcaaagccatgtaaaagtctctt
S:  atttagccgcgcaaagccatgtgaaagtctctt
              ^           ^          
   42408    42545     47    none      1      1
    Errors = 1
T:  ttgaaacccccgaatacaccg
S:  ttgaaaccccagaatacaccg
              ^          
   42474    42611     29    none     19     19
    Errors = 3
T:  ggattttagaagccatgcggattttaggattagaaaaga
S:  ggattttagaggccatgcggattttgggcttagaaaaga
              ^              ^  ^          
   42504    42641     38    none      1      1
    Errors = 1
T:  tttatcaagccagcacgagcg
S:  tttatcaagctagcacgagcg
              ^          
   42543    42680     71    none      1      1
    Errors = 1
T:  tagaaaccccgcaaaatgaaa
S:  tagaaaccccacaaaatgaaa
              ^          
   42639    42776     20    none     25     25
    Errors = 3
T:  tttacatcaccaaaaattacagagaggcctataacttgtttgcgg
S:  tttacatcactaaaaattacagagaggcttataatttgtttgcgg
              ^                 ^     ^          
   42660    42797    113    none      1      1
    Errors = 1
T:  ttaatggcattctttttaacc
S:  ttaatggcatcctttttaacc
              ^          
   42774    42911     35    none      1      1
    Errors = 1
T:  tagggaatttagacgctaaaa
S:  tagggaatttggacgctaaaa
              ^          
   42882    43019     41    none     73     73
    Errors = 8
T:  ccaaagattacgtgaaaatgatgcatttaatgctccaagcgcccatcccacaagattatg
S:  ccaaagattatgtgaaaatgatgcatttgatgctccaagcacccaccccacaagattatg
              ^                 ^           ^    ^              
T:  tgatcgccacaggaaagaccacaagcgtgcgcg
S:  taatcgctacagggaagaccacgagcgtgcgcg
     ^     ^     ^        ^          
   42931    43068     74    none      8      8
    Errors = 4
T:  aatttatcggtatcaatttagaatttca
S:  aatttatcggcattgatctagaatttca
              ^  ^^  ^          
   43127    43264     69    none    122    122
    Errors = 15
T:  gaacgctttaaaattgaacttaagccatttaaaaaaaggccaaatcgtggtgcgcataga
S:  gaacgctttacaattaaacttaagccatttaaaaacgggcaaaatcgtggtgcgtataga
              ^    ^                   ^^   ^             ^     
T:  cgagcgttatttcaggcctaccgaagtggatttgcttttaggcgatcccactaaggcaga
S:  cgagcactatttcaggcctactgaagtggatttgctcttaggcgatcccactggggctga
         ^^              ^              ^               ^^   ^  
T:  gaaagagctagactgggttagg
S:  gaaagagctgggctgggttagg
             ^ ^          
   43197    43334     26    none      1      1
    Errors = 1
T:  aagaatgccaaaaaaaccttt
S:  aagaatgccagaaaaaccttt
              ^          
   43229    43366     25    none      6      6
    Errors = 2
T:  aagatgggggttatattttaaggaat
S:  aagatgggggctatactttaaggaat
              ^    ^          
   43273    43410     44    none     19     19
    Errors = 4
T:  tgaatgagattattttaatcactggtgcctatggcatgg
S:  tgaatgagatcattttaatcaccggcgcttatggcatgg
              ^           ^  ^  ^          
   43362    43499     27    none     45     45
    Errors = 5
T:  ttaaaaaaaataagcctgatgttactctactcactcctaaaaagagcgaattgtgtttgt
S:  ttaaaaaaaacaagcctgatgttaccttactcacccctaaaaagagcgaattgtatttgt
              ^              ^^       ^                   ^     
T:  tggat
S:  tggat
         
   43390    43527     62    none      1      1
    Errors = 1
T:  acgttcaagcttatttgaaag
S:  acgttcaagcctatttgaaag
              ^          
   43465    43602     32    none     13     13
    Errors = 3
T:  ggggcattgtcgctaacatgaatgatctttcaa
S:  ggggcattgtggcaaacatgaacgatctttcaa
              ^  ^        ^          
   43533    43670     42    none     36     36
    Errors = 5
T:  agaatttactgatgggcttgtacctcttttctagcgctttagattcgggcgtgaaa
S:  agaatttactcatgggtttgtatcttttttctagcgctttagatttgggcgtgaaa
              ^     ^     ^  ^                   ^          
   43591    43728     41    none     16     16
    Errors = 3
T:  cttgcgcttaccctaaattcgcccccaaccctttaa
S:  cttgcgcttatcctaaatacgcccctaaccctttaa
              ^       ^      ^          
   43642    43779     44    none     10     10
    Errors = 2
T:  gctctttagagccaacgaacgaaggctacg
S:  gctctttagaaccaacgaatgaaggctacg
              ^        ^          
   43735    43872     35    none     49     49
    Errors = 6
T:  agtattgcgagtatgtgagcgctgaaaagggcgttttttataaaaccttagtgccttgca
S:  agtattgcgaatacgtgagcgctgaaaaaggcgttttttataaaactctagtgccttgta
              ^  ^              ^                 ^^          ^ 
T:  acctttatg
S:  acctttatg
             
   43771    43908     26    none      1      1
    Errors = 1
T:  ttgaagaaaaaatagcgcaca
S:  ttgaagaaaagatagcgcaca
              ^          
   43798    43935     36    none      1      1
    Errors = 1
T:  cagggcttatcgctaggatgc
S:  cagggcttattgctaggatgc
              ^          
   43837    43974     29    none      3      3
    Errors = 2
T:  aaatgaaaaagagtttgcgatgt
S:  aaatgaaaaaaattttgcgatgt
              ^ ^          
   43867    44004     38    none      1      1
    Errors = 1
T:  gcacggccaggagagagtatc
S:  gcacggccagaagagagtatc
              ^          
   43963    44100     74    none     58     58
    Errors = 8
T:  ccagattcatttctctagcttatgagaatatcgcttcaatccctagcgtgatgaatgttg
S:  ccagattcatcgctctcgcttatgagaatatcgctcaaatgcctagcgtgatgaatgtcg
              ^^    ^                  ^^   ^                 ^ 
T:  gctctggcgtggattaca
S:  gctctggagtggattaca
           ^          
   44040    44177     21    none      3      3
    Errors = 2
T:  ttgtgaaagacttatccaaacca
S:  ttgtgaaagattcatccaaacca
              ^ ^          
   44062    44199     28    none      1      1
    Errors = 1
T:  tgggcatgcagcaaaagctta
S:  tgggcatgcaacaaaagctta
              ^          
   44091    44228     85    none      1      1
    Errors = 1
T:  tccaaacaaagggctttaaaa
S:  tccaaacaaaaggctttaaaa
              ^          
   44197    44334     20    none     21     21
    Errors = 3
T:  agaggtttgaaataaaatcaaggctcttatggagctataaa
S:  agaggtttgatctaaaatcaaggctcttatagagctataaa
              ^^                  ^          
   44360    44499     24    none    143    145
    Errors = 32
T:  aacgctccgctattaagcgttaggctagtggtagttgcgatattgtgatcgtt..ttagc
S:  aacgctccgccattaggcgttaggctagcgatatttacgatattgcgatcacaagttcgc
              ^    ^            ^ ^  ^  ^        ^    ^^^^^  ^  
T:  ttcaaacaaactttgagccattaaaa.gggatttggtgtgtggcttcgctctcaatttca
S:  ttcaaacaaactt.gagccattaaaaaggggtttggttgcatgctttactcttcacctca
                 ^            ^   ^      ^^^^^    ^^    ^^ ^^   
T:  agtgctttcaaaaagcaaggtgtgttactattctattttttcataa
S:  agcgctttcaaaaagcaaggcgtgttagcattctaatttttcataa
      ^                 ^      ^^      ^          
   44494    44627     23    none    110    104
    Errors = 32
T:  ctagggggtaaggaatgtaagggggcttttt.tgttaggccaaccaccaacttctttgca
S:  ctagggggtagggaatataaggg..ctttttctatgagattaaccaccg....ctt.gct
              ^     ^      ^^      ^ ^ ^  ^^^       ^^^^^   ^  ^
T:  ttaaaaacaaactcgtattttacaagagagagttttgattggcatgagatctatctttta
S:  ttaaatcaaaacttgtattttacaaccagtagctataatttgcatgagatttatctttta
         ^^^     ^           ^^^^^  ^ ^ ^   ^         ^         
T:  gatgagcgggc
S:  tatgagcgggc
    ^          
   44532    44665     21    none     15     15
    Errors = 5
T:  tccctctattgaactgaatgtcctagatttttatg
S:  tccctctattaaattgaatgttttggatttttatg
              ^  ^       ^^ ^          
   44565    44699     23    none     12     13
    Errors = 3
T:  tgtctgtttt.agaggtgattgtcagttggttt
S:  tgtctgtttttagagatgattgccagttggttt
              ^    ^      ^          
   44649    44781     25    none     61     59
    Errors = 10
T:  ctttccaaaaacccaagtccctttatcagtgtctctatgctaacttcttttatatgctga
S:  ctttccaaaattccaagtccctttatcagt..ctttatactaacttcctttatatgctga
              ^^                  ^^  ^   ^        ^            
T:  caccgaaataaataaaattga
S:  caacgaagtatataaaattga
      ^    ^  ^          
   44675    44807     30    none      1      1
    Errors = 1
T:  atcgccaaatcttagcgtttt
S:  atcgccaaattttagcgtttt
              ^          
   44720    44849     25    none     15     12
    Errors = 6
T:  aaataaggaaatccatcattgttagcacaattccc
S:  aaataaggaagtctatc...gttatcacaattccc
              ^  ^   ^^^    ^          
   44757    44889     31    none     12     15
    Errors = 5
T:  tgatttttgcactcaata...tagcgatactatca
S:  tgatttttgcgctcaataatatagtgatactatca
              ^       ^^^   ^          
   44856    44997     26    none     68     77
    Errors = 19
T:  gatgtctatctaataaaggctgt.....t.ctta...aaagttacttcaatatttattgg
S:  gatgtctatccaataaagaccgtgaccatacctactgaaagttacttcaatgtctattgg
              ^       ^ ^  ^^^^^ ^ ^  ^^^              ^ ^      
T:  gggtttttcactgccactacacccagaaaaaaacaca
S:  gggtttttcactaccactacaccccacaaaaaacaca
                ^           ^^^          
   44954    45100     30    none     72     77
    Errors = 18
T:  ccaaaaatgattgctagcattaagcccgctttttt.gtaac..ccaccactaacac..tc
S:  ccaaaaatgaccgctcatatcaagcccgctttttttgtaacacccactattaaaaccctc
              ^^   ^^^  ^              ^     ^^    ^ ^   ^  ^^  
T:  tcttattgcaagttttttctcaaatgccttgagtata
S:  tcttattgtaagttttctctcaaatagcttgagtata
            ^       ^        ^^          
   45077    45226     66    none     93     96
    Errors = 30
T:  acttagcttaagcggactctaaaccattttt.agggca..ggcttaaaacgattaaaaaa
S:  acttagcttaggtgatctctaaaaaaatttagagggcaaaggcggtggggttttaaaaag
              ^ ^ ^^       ^^ ^   ^^      ^^   ^^^^^^^^^       ^
T:  tgacggcgtgttaacaaatcctaggcaataattcgccctctggcacctctaaaatc
S:  tgccttagttttagcaaatcctaggcagcaattcgccctctggcatctctaaaatc
      ^ ^^^  ^   ^             ^^                ^          
   45177    45326     26    none     34     34
    Errors = 7
T:  tttcaaacactttgccaatcacgcaagcgtttttagctttttcgttacttttta
S:  tttcaaacaccccgccgatcacgcaagcgtttttcgctttctcattacttttta
              ^^^   ^                 ^     ^  ^          
   45294    45443     35    none     91     91
    Errors = 8
T:  ctaaggctttaggggcgtctttttgattgagcgctaaaacaaacaccccctcattggcta
S:  ctaaggcttttggggcgtccttttgattgagcgctaacacaaacaccccctcattagcca
              ^        ^                 ^                 ^  ^ 
T:  gcgcgtagggttctaaccctaaaatctcacaaatccctttcgtttcttctt
S:  gcgcgtagggttctagccctaaaatctcgcaaatccctttagtttcttctt
                   ^            ^           ^          
   45369    45518    103    none     40     40
    Errors = 5
T:  cttcttctataacgattttcactctagagctgttcgcccattcgttcagcacgctcgcta
S:  cttcttctatgacgattttcactctggagctattcgcccattcgttcaatacgctcgcta
              ^              ^     ^                ^^          
   45515    45664     21    none     43     43
    Errors = 9
T:  caatcgctttctagattcgttttaagcttgatttcattacgcatcgcaaataagcttgcc
S:  caatcgctttgcaaattggttttaagtttgatttcatgacgcgtcgcaaacaggcttgcc
              ^^ ^   ^        ^          ^    ^       ^ ^       
T:  cca
S:  cca
       
   45537    45686     39    none      1      1
    Errors = 1
T:  gattggcgatagtgtcgctta
S:  gattggcgatcgtgtcgctta
              ^          
   45578    45727     36    none      2      2
    Errors = 2
T:  ttgtaaatggtacgaagaaatc
S:  ttgtaaatggcgcgaagaaatc
              ^^          
   45615    45764     59    none      1      1
    Errors = 1
T:  taccaatgcaggttgtgttga
S:  taccaatgcaagttgtgttga
              ^          
   45684    45833     38    none     10     10
    Errors = 2
T:  tgtctagggagaggagtttcaggttggctt
S:  tgtctagggaaaggagttttaggttggctt
              ^        ^          
   45741    45890     77    none     19     19
    Errors = 4
T:  tggattgtaaaatttgttttaaaagagaaatttctaagc
S:  tggattgtaagatttgctttaaaagagggatttctaagc
              ^     ^          ^^          
   45819    45968     32    none      1      1
    Errors = 1
T:  catcattcgcactcccgcaaa
S:  catcattcgcgctcccgcaaa
              ^          
   45855    46004     38    none      4      4
    Errors = 2
T:  ctatatcgcccccattaaaaatta
S:  ctatatcgcctccgttaaaaatta
              ^  ^          
   45894    46043     47    none      1      1
    Errors = 1
T:  tatccgtgctcacgcaatatt
S:  tatccgtgcttacgcaatatt
              ^          
   45942    46091     44    none      1      1
    Errors = 1
T:  cttcatcaaatgcaacaatcc
S:  cttcatcaaacgcaacaatcc
              ^          
   45987    46136    108    none      1      1
    Errors = 1
T:  ctcgctcaatcaaagcgtttg
S:  ctcgctcaattaaagcgtttg
              ^          
   46096    46245     47    none      1      1
    Errors = 1
T:  gcttgaccgatagggatactg
S:  gcttgaccgacagggatactg
              ^          
   46187    46336     35    none     44     44
    Errors = 10
T:  aaaaaatactgcctctttagccctctcaatcgtttggctaattgttcgcataataattgg
S:  aaaaaatactccctttgaagctttttcaatcgcttggctaattgttcgcacaacaattgg
              ^   ^ ^^   ^^ ^       ^                 ^  ^      
T:  ttgc
S:  ttgc
        
   46247    46396     22    none     25     25
    Errors = 5
T:  tgcacaccaccacatgctctttaaaaggcacgattaaagcggtaa
S:  tgcacaccacgacatgccctttaaaaggcgcaatcaaagcggtaa
              ^      ^           ^ ^  ^          
   46270    46419     29    none      1      1
    Errors = 1
T:  atttctactaggctgttaaaa
S:  atttctactaagctgttaaaa
              ^          
   46304    46453     41    none      5      5
    Errors = 3
T:  gcgatgcgttcaggctctaaaacgc
S:  gcgatgcgtttgggttctaaaacgc
              ^^  ^          
   46354    46503     53    none      9      9
    Errors = 2
T:  gataaaattctttcaaacacaccacgctg
S:  gataaaattccttcaaacgcaccacgctg
              ^       ^          
   46408    46557     30    none      1      1
    Errors = 1
T:  tcgctttgtaaggctagattt
S:  tcgctttgtagggctagattt
              ^          
   46481    46630     35    none     43     43
    Errors = 10
T:  gcccgctctctgcttcaaagctaatcgttcctgttaaatccaaactaaacgctactatat
S:  gcccgctctcggcttcaaaactaatcgttcccaccacgcccaaactaaacgccactatat
              ^        ^           ^^^^ ^^^             ^       
T:  caa
S:  caa
       
   46519    46668     29    none      3      3
    Errors = 2
T:  aattggtggctatgctttgaatt
S:  aattggtggcgacgctttgaatt
              ^ ^          
   46610    46759     28    none     62     62
    Errors = 6
T:  tgcatttgttggaaaatttctaattcgtcttctttaaaatgcttttgaacgcgctttaaa
S:  tgcatttgtttaaaaattcctaattcgtcttctttgaaatgcttttgaacgcgttttaaa
              ^^      ^                ^                 ^      
T:  agcttgttgagttggtgtttta
S:  agcttgttgagctggtgtttta
               ^          
   46642    46791     51    none      4      4
    Errors = 3
T:  tctaaaaccaggcgtctaggctct
S:  tctaaaaccaatcttctaggctct
              ^^ ^          
   46702    46851     72    none      9      9
    Errors = 5
T:  attcttcaaacctggcggtttcttcaatg
S:  attcttcaaatctagccacttcttcaatg
              ^  ^  ^^^          
   46787    46936     35    none     13     13
    Errors = 3
T:  ccccactcccatcccagacaatgcctataaagg
S:  ccccactcccgtcccaaacaatacctataaagg
              ^     ^     ^          
   46823    46972     82    none      1      1
    Errors = 1
T:  gatcttgtaacaatgcgtcta
S:  gatcttgtaataatgcgtcta
              ^          
   46907    47056     22    none      2      2
    Errors = 2
T:  aaagccatttgagtggtggtgt
S:  aaagccattttggtggtggtgt
              ^^          
   46955    47104     97    none     26     26
    Errors = 5
T:  ttttgatgcttgtcgcaagctaagatggtgggtttaaaatcatagg
S:  ttttgatgctcatcgcaagctaagagcgtgggtttgaaatcatagg
              ^^             ^^        ^          
   47071    47220     21    none     19     19
    Errors = 5
T:  agtaaaagaatggaagttccgctatccaataagctaaaa
S:  agtaaaagaacagaagtttcgctatctagtaagctaaaa
              ^^      ^       ^ ^          
   47095    47244     24    none      3      3
    Errors = 2
T:  gccctttttgttgcgctccaagc
S:  gccctttttgctccgctccaagc
              ^ ^          
   47147    47296     23    none     28     28
    Errors = 9
T:  aaatcttttttggcgaaccattagagcgtttaggcaaggtgaggtaaa
S:  aaatctttttgggcgcattaaaagagcgtttgggtaaagtgaggtaaa
              ^    ^ ^^ ^^         ^  ^  ^          
   47175    47324     31    none      5      5
    Errors = 2
T:  gggcaaaccccctagccaaacgcat
S:  gggcaaaccctctaaccaaacgcat
              ^   ^          
   47245    47394     30    none     39     39
    Errors = 7
T:  cattatccacatgctgcacgatgctgtcatcaatcctatggatgatagcgcggttgtgc
S:  cattatccacgcgctgcgcgatgctatcatcaatcctgtggatgatggtgcggttgtgc
              ^^     ^       ^           ^        ^ ^          
   47300    47449     35    none     25     25
    Errors = 11
T:  aatcaaaaatgaaactcaag.gcgtcaatctcagcctcatcgctcg
S:  aatcaaaaataaaa.tgaagcgaatcgatctctttttcatcgctcg
              ^   ^ ^   ^ ^^  ^     ^^^^          
   47369    47518     32    none     34     34
    Errors = 5
T:  tgaaattcgcgctcgtgaacacaatagggaaatccaataaatccagcaataaag
S:  tgaaattcgcactcgtgaatacaataggggaatctaataaatctagcaataaag
              ^        ^         ^    ^        ^          
   47405    47554     43    none      4      4
    Errors = 2
T:  tatagggcaaaatcacgccataaa
S:  tatagggcaagataacgccataaa
              ^  ^          
   47453    47602     32    none      5      5
    Errors = 4
T:  ggggctaattttatatcaggttttt
S:  ggggctaattgggtgtcaggttttt
              ^^^ ^          
   47504    47653     32    none     19     19
    Errors = 6
T:  gaatgggggcgcttgtagaaattaagctctcgcattcta
S:  gaatgggggcacttaccgaatttaagctttcgcattcta
              ^   ^^^   ^       ^          
   47581    47730     24    none     45     45
    Errors = 6
T:  acgcatgctgtttggctgtgttcaaatctttaaacatgagtgcgaaaggctttagggggc
S:  acgcatgctgcttggctgcgtttagatctttaaacatgagcgcgaaaggctttaaggggc
              ^       ^   ^ ^               ^             ^     
T:  ggttt
S:  ggttt
         
   47631    47780     22    none     26     26
    Errors = 5
T:  aaagccgtaatctttctatggtttgaaaattccttccatcgcacaa
S:  aaagccgtaacctctctatggttttaaaattcctcgcatcgcacaa
              ^  ^          ^         ^^          
   47654    47803     68    none      1      1
    Errors = 1
T:  gagcaaagcctcccaaacctt
S:  gagcaaagccccccaaacctt
              ^          
   47738    47887     29    none     16     16
    Errors = 2
T:  gagcgtcatcgtttttgaatcgcttgtaattgagcg
S:  gagcgtcatcatttttgaatcgcttataattgagcg
              ^              ^          
   47851    48000     26    none     84     84
    Errors = 22
T:  actttttgcagctgatgccttgaatgtggaagcgcttattggtggggtcttgatagatag
S:  actttttgcaacttatgccttgaatatggaatcgtttgttatgagcgtctttataaacgg
              ^  ^           ^     ^  ^  ^  ^^^^ ^     ^   ^ ^^ 
T:  aagcacaaaaatcgcagagtttgaagggttttagggcggagttt
S:  atgcgcaaaatttgcagagcttgaaaggttttaaggcggagttt
     ^  ^     ^ ^      ^     ^       ^          
   47879    48028     23    none      2      2
    Errors = 2
T:  tcatagggcaaagcgtttaaaa
S:  tcatagggcatggcgtttaaaa
              ^^          
   47909    48058     47    none      7      7
    Errors = 3
T:  tgtatctcgccccacacttcgcgcaag
S:  tgtatctcgctccgcatttcgcgcaag
              ^  ^  ^          
   47981    48130     26    none     25     25
    Errors = 7
T:  agtttttatccctgatttctctcaagcaatccttgcacacgccta
S:  agtttttatctctaatctcgcacaagcaatcctcacacacgccta
              ^  ^  ^  ^ ^           ^^          
   48020    48169     23    none     13     13
    Errors = 3
T:  tagggatttggctgagcaaattcaaggggtggt
S:  tagggatttgactgagcagatttaaggggtggt
              ^       ^   ^          
   48068    48217     32    none     25     25
    Errors = 3
T:  tgctttctaagatcctaaaaccattgaaatgaagtgccttatcat
S:  tgctttctaaaatcctaaaatcattgaaatgaagcgccttatcat
              ^         ^             ^          
   48134    48283     37    none     34     34
    Errors = 5
T:  tgattttttcaaccaacgctaaaggaggcaaccctttttttagagcgtttaaaa
S:  tgattttttccaccaacgctaaagggggtaatcctttttttagggcgtttaaaa
              ^              ^  ^  ^           ^          
   48172    48321     20    none      1      1
    Errors = 1
T:  gcgggtaagatgatttctaaa
S:  gcgggtaagacgatttctaaa
              ^          
   48241    48390     83    none     49     49
    Errors = 6
T:  gccgcttgggtgttacgcacaaagcccacaagctctaatttttgagctagggtataaata
S:  gccgcttgggcgttacgcacaaagcctacaagccctaatttttgagccaggatataaaca
              ^               ^      ^             ^   ^      ^ 
T:  aaagggcgc
S:  aaagggcgc
             
   48349    48498     36    none     25     25
    Errors = 4
T:  aatgcaaacttccatgctgtttgattaaggtgttgcaatcaaccc
S:  aatgcaaactcccatgctgtttgattaaagtattacaatcaaccc
              ^                 ^  ^  ^          
   48412    48561     20    none     27     27
    Errors = 5
T:  cgtgtgttgtttcaaggtttctaaaatgagcgcgtctttagggtcgt
S:  cgtgtgttgtcttaaggtttctaaaatgagcgtatcattagggtcgt
              ^ ^                   ^^  ^          
   48441    48590     39    none      9      9
    Errors = 4
T:  tgtaagtgggcacgattaaagcgttattg
S:  tgtaagtggggacaatcagagcgttattg
              ^  ^  ^ ^          
   48507    48656     33    none     27     27
    Errors = 4
T:  aagttgccggcaagcgttgttggttttcatcaaaaatggctttaggg
S:  aagttgccggtaagcgttgttggttttcattataaacggctttaggg
              ^                   ^ ^   ^          
   48541    48690     62    none      1      1
    Errors = 1
T:  tgagtttatagggcgtgccgt
S:  tgagtttataaggcgtgccgt
              ^          
   48604    48753     25    none      1      1
    Errors = 1
T:  aggctgtgtagtgctcatcgt
S:  aggctgtgtaatgctcatcgt
              ^          
   48630    48779     23    none      1      1
    Errors = 1
T:  tcttcgcatgtgctataaaca
S:  tcttcgcatgcgctataaaca
              ^          
   48654    48803     33    none      1      1
    Errors = 1
T:  gtgtctttatctaaaaaacga
S:  gtgtctttatttaaaaaacga
              ^          
   48703    48852     57    none     16     16
    Errors = 2
T:  tatggctatcggtatcatcgcctttgagatagccat
S:  tatggctatccgtatcatcgccttttagatagccat
              ^              ^          
   48761    48910     45    none      1      1
    Errors = 1
T:  tttaagcatgttttctattcc
S:  tttaagcatggtttctattcc
              ^          
   48807    48956     23    none      1      1
    Errors = 1
T:  tttttttctaacaggcattgg
S:  tttttttctagcaggcattgg
              ^          
   48856    49005     50    none     26     26
    Errors = 3
T:  ttggttaaaacgctcccagccccatcgctttctatactcccgccct
S:  ttggttaaaatgctcccggccccatcgctttctatgctcccgccct
              ^      ^                 ^          
   48922    49071    131    none     16     16
    Errors = 4
T:  gttttaaaaaccctaaacttttgagtttgaaattca
S:  gttttaaaaaacctaaatgtttgagcttgaaattca
              ^      ^^      ^          
   49063    49212     48    none     10     10
    Errors = 2
T:  atgtgtcgttagtgtcaatccttgcgatct
S:  atgtgtcgttggtgtcaattcttgcgatct
              ^        ^          
   49137    49286     35    none     26     26
    Errors = 5
T:  ataaccgataatatcgttagtgtggacgcacactagcactttagcg
S:  ataaccgatagtgtcgttagtatggacgcacaccaacactttagcg
              ^ ^        ^           ^ ^          
   49243    49392     42    none     71     71
    Errors = 10
T:  tgaatgatgtttaaaaaactttccctagcctctttgatacaatacgcccagtcgctaaac
S:  tgaatgatgtgtaaaaagctctccctggcctcttcaatacaatacgcccagtcgccaaac
              ^      ^  ^     ^       ^^                   ^    
T:  tcatgggggaaagccattagaatcgcttgga
S:  tcatgggggaacgccattaagatcgcttgga
               ^       ^^          
   49303    49452     38    none     18     18
    Errors = 3
T:  tcttttcattcaaaatatccttttaaataactataaca
S:  tcttttcattaaaaatatccttttaagcaactataaca
              ^               ^^          
   49364    49514     28    none     23     24
    Errors = 8
T:  gtttttaaaacagat.tcaaacgctttttagcggtttgaaaata
S:  gtttttaaaagctagctcaaacgcttttgcgcgatttgaaaata
              ^^^ ^^            ^^   ^          
   49432    49582     28    none     40     40
    Errors = 6
T:  ctgattctatgccgataaaattccgttctaaatttttgcacgctaagccggtggtgccgc
S:  ctgattctataccgataaaatttcgctttaaatttttgcacgctaaaccagtggtgccgc
              ^           ^  ^ ^                  ^  ^          
   49466    49616     20    none      6      6
    Errors = 3
T:  aaaggatctagcacgatgtcattagg
S:  aaaggatctaacactgtgtcattagg
              ^   ^^          
   49489    49639     22    none      3      3
    Errors = 2
T:  gtttgtgtggatggaaatgattt
S:  gtttgtgtgggtagaaatgattt
              ^ ^          
   49513    49663     23    none      2      2
    Errors = 2
T:  tccattaaggccaggctttttt
S:  tccattaaggttaggctttttt
              ^^          
   49579    49729     23    none     43     43
    Errors = 8
T:  tggggtgtttggttttttcaagcccgcttaccacagggctttttaaaatcaaaggccgta
S:  tggggtgtttcactctttcaatcccgctcaccacagggctttttaagatcaagggccgta
              ^^^ ^      ^      ^                 ^     ^       
T:  aat
S:  aat
       
   49621    49771     23    none     19     19
    Errors = 2
T:  tttcatttttgggtttgttaaacacccacttggctttct
S:  tttcatttttaggtttgttaaacacccatttggctttct
              ^                 ^          
   49681    49831     50    none     37     37
    Errors = 5
T:  taaccgcccacagagcaaattccgtgtcttggacataacgccggtgaatgtttcttg
S:  taaccgcccatagggcaaattctgtgtcttggacatagcgccggtggatgtttcttg
              ^  ^        ^              ^        ^          
   49732    49882     41    none      1      1
    Errors = 1
T:  agtctttgaccacaaagccgt
S:  agtctttgactacaaagccgt
              ^          
   49774    49924     20    none      1      1
    Errors = 1
T:  tatagcttataaacctgtaag
S:  tatagcttatgaacctgtaag
              ^          
   49795    49945     22    none      1      1
    Errors = 1
T:  agcaaaaaataaccatgcagc
S:  agcaaaaaatcaccatgcagc
              ^          
   49824    49974     54    none      7      7
    Errors = 2
T:  tttggattgactaagggggcgtagcgt
S:  tttggattgattaaggaggcgtagcgt
              ^     ^          
   49891    50041     22    none     13     13
    Errors = 3
T:  attccccaaaatctatgccttgccttttagcgc
S:  attccccaaagtctatgccctgtcttttagcgc
              ^        ^  ^          
   49915    50065     23    none      2      2
    Errors = 2
T:  tttagggtgggaaaattgtttt
S:  tttagggtggagaaattgtttt
              ^^          
   49951    50101     34    none     13     13
    Errors = 3
T:  ccgaaatgttataaggagggtccgtgatgatcg
S:  ccgaaatgttgtaaggaggatctgtgatgatcg
              ^        ^  ^          
   50042    50191     48    none     57     56
    Errors = 11
T:  ttttgctggtaaaagtctttgatgatttcaaaagcgtcagcgtgataaatttgtatcatt
S:  ttttgctggtggaaatccttgatgatttcaaaggcgttagcgtgatggatttgtatcatt
              ^^  ^  ^              ^    ^        ^^            
T:  ttcttaagctttttaag
S:  t.cttgcgctttttaag
     ^   ^^          
   50109    50258     34    none     19     19
    Errors = 2
T:  gaggaggcacagcgttaccgatttgcttacaaacgctcg
S:  gaggaggcacggcgttaccgatttgcttgcaaacgctcg
              ^                 ^          
   50144    50293     33    none      1      1
    Errors = 1
T:  aagatataattatcgctaaaa
S:  aagatataatcatcgctaaaa
              ^          
   50178    50327     23    none      1      1
    Errors = 1
T:  cggcttctctaggcgtgatag
S:  cggcttctctgggcgtgatag
              ^          
   50202    50351     23    none      1      1
    Errors = 1
T:  ggtgcaattcggggtgggagt
S:  ggtgcaattcagggtgggagt
              ^          
   52032    50438     25    none   1807     64
    Errors = 1746
T:  tgccattgctgggagtgtcaaatcgtgtgtctatggtggggctgattttattccaattca
S:  tgccattgctcggagt............................................
              ^     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  ggcgcccccatgtgcttttgaattgctgtttgccatgcaagtttttaggcaagcattctt
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  tgccttgttctttgttaatgagttttaatttctctaaagcggcttgcgagtggttggtgg
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  cttgatggttgtataatttagggctatcttttcgcattaaagcttgatagcttgattgga
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  tagggtttaaataatcgctctcaaacgccccctcattagaacaaagataggctaaatcgc
S:  ...............................................ta..ctaaat...
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^      ^^^
T:  ttatggcatcttgaacattcacgctttgagaaggctctaaaagattgaaatcaaaactga
S:  ...........................gaga.............................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  aacgactagcccctacaataaaggctctctctctgttttgaggcacgccataatctttag
S:  ...........................................................g
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 
T:  cgtttaggatttgatagctcaattgataccctaaagcgttcaacctttctttaatttctt
S:  cggtta......................................................
      ^   ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  ctaaaaaatagcctttagcgcaagagatgaggtttttcacgttttcaatgataaaaattt
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  ctggctttatggctttgactatttctatatattctaagaataaaaaattcctagggtctt
S:  ..........................................aaaaa.............
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^     ^^^^^^^^^^^^^
T:  ttagccctaaatttttccctttattagaaaagccttgacatggaggcccgccaatgatca
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  tgttgatttctaattttttagctagtttgatgactttttctttaatttcggtttgagtga
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  tgtccccacaaacgcctatggcgtttttatggttgttttcaaaagtgattagggcttgtt
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  tatcgcaatctagccctattaaagcgtcaaactcttctaaacactctaacccagcgctaa
S:  .........................gtca...............................
    ^^^^^^^^^^^^^^^^^^^^^^^^^    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  aacccccagccccacaaaataaatctaaaattttataattcatttcaagctttcacaaat
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  acgatcaataagcgttgaaaaatcatcggtttcaaaacgcaattgcgcaaactctaaatt
S:  ..........................................................tt
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
T:  gtctttattgcgattgagaatgtttctaatcaagcgtttttgaaactcctcttcgctaga
S:  gtct........................................................
        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  tcctttttttaaagccctatgacaagtagggcaaagtttagcaagatttgctaaaacatc
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  taattctctgattttgcctaaagaaatcatgtatttcagtgtagtaggaatcgggatttt
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  gagtgatttgatataaaggtaaagaaagaaaacttctttctttaatgtcgtaatcatcgc
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  agcatgcactgcaaacattaggcgttgaaaggcgataaagattgatgattttgctatctc
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  gtctaaactcctcgctcttttgaataaagcctaactgctcccttaatttttcaatgcttt
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  tatcatctaaatcctgttgataaatgtttttcaaataaaaatgagcgcattctgtaaagc
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  tattaccatgatactttgttgttggcgggtagtttaatttataataaatgccatcatgag
S:  ........................................ataat...............
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^     ^^^^^^^^^^^^^^^
T:  caagagtggttttaaaaacatgttcagcgattcgcgctttataagggttaaacagaccga
S:  ....................................................caga....
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^    ^^^^
T:  tatggtgtaaataccaatctaaataaatcctgaattgagcgtttcgttggttaatgcctt
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  gcgcgtattcaggctgtaattccctgaaattgaaattcagcgcttcgctagggatattga
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  aaaaatcaattaaataatggaactttttaaactctaaagggctatgaaagaagtaatcta
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  aagtcaaaaaatttcgttgcgtatcaatgctgcccctgctttcaaaaaagccgctcaaaa
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  agcgtttttgattgggggtcattgaatgggagcggttaaaaaaatcgttgtctatgagcg
S:  ............................................................
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
T:  agtttaaaagtttcttgtaaaaagagt
S:  ..tttaaaagtttcttataaaaagagt
    ^^              ^          
   52062    50468     31    none      5      5
    Errors = 2
T:  tctaaatgcaagtcgttttctaaaa
S:  tctaaatgcaggtcattttctaaaa
              ^   ^          
   52094    50500     34    none      1      1
    Errors = 1
T:  gttcctttgatttttgtaacg
S:  gttcctttgacttttgtaacg
              ^          
   52209    50615     71    none     81     81
    Errors = 15
T:  ttgccaaattggatgcacgcttaaagtattgagagcgtttaaaacctgtgctttgctttc
S:  ttgccaaatttgatgcttgcttaaaatattgagagcgtttaaaactcgcgctttgctttc
              ^     ^^       ^                   ^^ ^           
T:  ttcatagccatagacagattttgaagccttataagaacaca
S:  ttcatatccaggggtaaattttgaaaccttgtaagaacaca
          ^   ^^ ^^ ^        ^    ^          
   52300    50707     23    none     20     21
    Errors = 4
T:  aattaaaagggtcaatagcgtt.aaaaagcaagaaacaagc
S:  aattaaaaggatcaatggcgtttaaaaagcgagaaacaagc
              ^     ^     ^       ^          
   52349    50757     28    none     26     27
    Errors = 5
T:  aataaccttttatttttta.aaaggattataagatagcgctcattag
S:  aataacctttcattttttttaaaggattataaaataacgctcattag
              ^       ^^            ^   ^          
   56114    53289     63    none   3737   2504
    Errors = 1983
T:  taaaggtttt.agaatgctatgaacaaagcatggcttaagaaaaggataagataagtcaa
S:  taaaggtttttagaatgctactaacaaggcatggtttaa..aaagctt....taatccaa
              ^         ^^     ^      ^    ^^    ^^ ^^^^   ^^   
T:  gcgggtttttatagccagtttcaataaaacttattaaaattttagcttgaaagctcttaa
S:  gc....tctcat.........caa.agagctt..taag...tta.....aaaga.ctta.
      ^^^^ ^ ^  ^^^^^^^^^   ^ ^ ^   ^^   ^^^^   ^^^^^    ^^    ^
T:  atcgtttttatctagcaagtatgaccaacttggatctttgctcttgttaaaatcaaaata
S:  ..cgatatt.........gaataagc.....gcatcattggatttcttaggacaaaaatt
    ^^  ^ ^  ^^^^^^^^^ ^  ^ ^ ^^^^^ ^   ^   ^^^  ^   ^^ ^^     ^
T:  aaaagcatctattacttttaataattcccattcgttcttgacttgagaaaagatagttgt
S:  aatggtattga..actttttaaaat....agt..tacaatgcttgagcta.gcgggctgt
      ^^ ^  ^^ ^^      ^ ^   ^^^^ ^ ^^ ^ ^^^^      ^^ ^ ^^^ ^   
T:  tttgaggcccatattcaacacaacaatataatcattccaatcatatacgccttgagtgtc
S:  attggcttagctatttta.atgagagtgt...catttaaatcttataacacatcataggg
    ^   ^^^^^^^    ^^ ^ ^^ ^ ^ ^ ^^^    ^^    ^    ^^^ ^ ^ ^^ ^^
T:  attaagaattgtggtcgttttagctaataagcagatatattgaaaatctttatcaatcaa
S:  ..taa..ataga......ttt.gcaaa.....aga.atac....aatcat.atcaattaa
    ^^   ^^  ^ ^^^^^^^   ^  ^  ^^^^^   ^   ^^^^^    ^ ^      ^  
T:  gcgggtttgattattagggtgggcgtaaataaaatgttgattaggagtgagtgcgataag
S:  catggtgagtttttt.gactccatttaaa..aaa..........gcgtgagtt...taag
    ^^^   ^^ ^  ^  ^ ^^ ^^^^^    ^^   ^^^^^^^^^^ ^      ^^^^    
T:  attctctatatagttagcaataatgggaaagtcttggatgggaaaaatatggtgtatttg
S:  .....c......gt....aa.aa...gaaaa.cttgtatc....aagttt....tattgg
    ^^^^^ ^^^^^^  ^^^^  ^  ^^^    ^^    ^  ^^^^^  ^ ^ ^^^^    ^ 
T:  tgtggcttgcgactcttctttttcttgttttacttcagagagagaattattaaatctatc
S:  ag..........ctat.cttt.....g....acc.ca...atacaattttaaaaaaca..
    ^ ^^^^^^^^^^  ^ ^    ^^^^^ ^^^^  ^^  ^^^ ^ ^    ^ ^   ^^^ ^^
T:  attatatcgtttcaccactttcttagcttttgaaataagatagttagaattagcaatcct
S:  aggaaatcat...aaaaattt.tgag......aaacaa.......acaagt.......ct
     ^^ ^   ^ ^^^ ^^ ^   ^ ^  ^^^^^^   ^  ^^^^^^^ ^  ^ ^^^^^^^  
T:  tttagagtttataagatcgtattcttgtctggtggtatttttatcttttcctatatctcg
S:  ttt...gtt......attgt.ttcaag.cttgt..ttttgcaagcttgg...ata....g
       ^^^   ^^^^^^  ^  ^   ^^ ^  ^  ^^ ^  ^^^ ^   ^^^^^   ^^^^ 
T:  ccaattgatacgattataattaagctcatcttttgtaattatagtgttggacaaataccc
S:  ccaaatcgga..attatcaat..gc....ctata..aattttcgt.tgcaataaaaacgc
        ^ ^^^ ^^     ^ ^ ^^  ^^^^  ^ ^^^    ^ ^  ^ ^^^ ^   ^  ^ 
T:  ttttcttgtgccttttttaccataataaaaagctaaaggattgataattttagtaaaaat
S:  agattttaagg..ttgtt.ccagaaccacaa...aaac...................aat
    ^^^ ^  ^^ ^^^  ^  ^   ^  ^^ ^  ^^^   ^^^^^^^^^^^^^^^^^^^^   
T:  cctaaaacattccgtagcgttattgattgctgtgttattgat..agtaaaatgagtgaaa
S:  c.taaaacaatac.tatctttattagaagaggttttaatgattaagtctaataattgagc
     ^       ^ ^ ^  ^ ^     ^^^^ ^^  ^   ^    ^^   ^^   ^ ^   ^^
T:  ccatcttttagttgcttaaaactttctgtgtcttgtttttgtaaaaagttgtcaaataaa
S:  gtttttttctgtagggtag..ctt...ggatattgtgggtctttaaa.ttccca......
    ^^^ ^   ^^  ^ ^^  ^^^   ^^^ ^^ ^    ^^^ ^ ^^   ^  ^^  ^^^^^^
T:  ggataaatcccactatccattaataccttttgaatatataaaataaggaatttcaaagcg
S:  .gatgtcttggact............cttttgccaacttgttctaaggcat...aaa...
    ^   ^^^ ^^^   ^^^^^^^^^^^^      ^^^ ^^ ^^^^     ^  ^^^   ^^^
T:  tttgtttctctttgcatgagatattctaatagctctatgttttgtatggtataaatattt
S:  ttttttt..........................tctagggttattattgttagaatact.
       ^   ^^^^^^^^^^^^^^^^^^^^^^^^^^    ^ ^  ^^   ^  ^^^    ^ ^
T:  ctattgccagtttttgtttcaaataaaataccgctataggctaataatttaataggctga
S:  caat...caaaccttcttt...atccca.ac.gctcaagtgtggcaatatca...g.tgc
     ^  ^^^  ^^^^  ^   ^^^  ^^^ ^  ^   ^^  ^^ ^^^   ^ ^ ^^^ ^  ^
T:  gaaaaaaacttatcgtattcatgcatggaaaagtcagaatttaaatcaggtttagaaaaa
S:  gccaa.....tgccgcccttttggaggtagcatacc...tttaaat..gctttagaa...
     ^^  ^^^^^ ^^  ^^^ ^^  ^ ^ ^ ^^ ^^ ^^^^       ^^ ^       ^^^
T:  atcattttaacattttcattggtgtaagggctatcccaaatatccctaatagaaaatgat
S:  ..cattcgc.cactttc...................cacttctcc....tggagcatg.t
    ^^    ^^^^  ^    ^^^^^^^^^^^^^^^^^^^  ^^ ^   ^^^^ ^  ^^   ^ 
T:  tttccaatattacattgcgtaaactctaaaatacaatcagcaacaagagacaacacatca
S:  attggaacggta....gtgtaacgccttttat.cttt...........gtcaatt..tta
    ^  ^^  ^^^  ^^^^ ^    ^^^  ^^^  ^ ^^ ^^^^^^^^^^^ ^   ^^^^ ^ 
T:  ggggtgcatttttgatctatccatcgcgcattttgtgtttttctaatgtcataatctcta
S:  gggaatcgttttt...ctaa..atc.......ttgtggcgta.taaggg....atct.ta
       ^^^ ^     ^^^   ^^^   ^^^^^^^     ^^^ ^^   ^ ^^^^^    ^  
T:  agttttaaaaaatcaatcattgattgctctttcataagctactccttaaaattccaaacc
S:  ggttcgttaaaa...atgg..gatt....ttt..........tcctttagagt..aaaat
    ^   ^^^^    ^^^  ^^^^    ^^^^   ^^^^^^^^^^     ^ ^ ^ ^^   ^^
T:  aaaaacaactcatgctatcaatatttaaggtgcgcgtttgataattcctagcgattttat
S:  aaaa.....tcat...atc..t.tttatgttac.c.....atag..cctatcc.tttta.
        ^^^^^    ^^^   ^^ ^    ^ ^ ^ ^ ^^^^^   ^^^    ^ ^^     ^
T:  aaaaatctctaa.attcaacgctagagatataatcgcattgtttcttgcttaaagatatg
S:  ..aaatttttaggattgcactttatgcgtgtgatttcatt...tct.....aaa...at.
    ^^    ^ ^  ^^   ^^  ^^  ^^^^ ^ ^  ^^    ^^^   ^^^^^   ^^^  ^
T:  gggtttttagggattaaaatagccacagagccattaaccacatagcctttttcttttttt
S:  ...tttgtatg..........................ccaaata.....tttcatct...
    ^^^   ^  ^ ^^^^^^^^^^^^^^^^^^^^^^^^^^   ^   ^^^^^    ^ ^ ^^^
T:  aaaatccttggcttataggtcatgttgggggttaaatagacatcatctctgtctaaaaat
S:  aacat...tacctt....gacat...........aat.gccct.atct.tgt...aatct
      ^  ^^^ ^^   ^^^^ ^   ^^^^^^^^^^^   ^ ^ ^ ^    ^   ^^^  ^^ 
T:  gaagctatcttaaacggacttaaaacctctttttgaatgtagctatcgtaattttcaatg
S:  gtatgca.cata....ga..tagagccttgttctgaa...agcaat.....tctttaa.g
     ^ ^^^ ^ ^  ^^^^  ^^  ^ ^   ^^  ^    ^^^   ^  ^^^^^ ^  ^  ^ 
T:  ctaataatctttccgttttcatcaatattgcgagatttaatcacacgaataccattttta
S:  c.aata..ccaggcgttgttttaaaaattcc...ataaaatc.catacccactacttt..
     ^    ^^ ^^^^    ^ ^^ ^  ^   ^ ^^^  ^^    ^  ^^^^^  ^ ^   ^^
T:  accaacacagaattagtgatttgtctgtctctaaacacttcaaaaagaccaaactgcatg
S:  ...atcact..ataagcaatatcgccat.tcttagaattgctaat.........tg..tg
    ^^^ ^   ^^^  ^  ^^  ^ ^^ ^^ ^   ^ ^^ ^ ^ ^  ^^^^^^^^^^  ^^  
T:  gaatgaaacaccttatcaaaaaaagcgttgcgatagataacccaatagggcaattgtttg
S:  gt.tg...ctc..taccat........ttgtgatag.taa...aat...g..attgtttg
     ^^  ^^^ ^ ^^  ^  ^^^^^^^^^   ^     ^   ^^^   ^^^ ^^        
T:  tcaaaaatatagcttggcttttgcttgatgcttagatttaggggtaacgaacgcgctaaa
S:  tagcaaatggag...gg..............tca.atata....tatcaaat...ctatt
     ^^^    ^^  ^^^  ^^^^^^^^^^^^^^ ^ ^  ^  ^^^^  ^ ^  ^^^^   ^^
T:  acttcttttgatttttgtgtaacaatagcaattgtttctaccaaaacacccttaaaacca
S:  tttccttttaggtttt.tgt........ca....ttt.......aaca.....aaaa..a
    ^^ ^     ^^^    ^   ^^^^^^^^  ^^^^   ^^^^^^^    ^^^^^    ^^ 
T:  agctcgccaaagtctaaaatcgctcctactccctttttttcaagcttagttctagtttct
S:  ag.tag....ag.cga...ttgcattttctgc..ttgtatcaa...ta.....agttt.t
      ^ ^ ^^^^  ^ ^ ^^^ ^  ^^^ ^  ^ ^^  ^ ^    ^^^  ^^^^^     ^ 
T:  gcatactctttagtgtttaaaaggtttttaggcataaccatcgctgtaaagttggctagt
S:  gcatt.tctct..tatttaaa.....ttt.ggtataa..........aaa.tt..ctcgt
        ^^   ^ ^^ ^      ^^^^^   ^  ^    ^^^^^^^^^^   ^  ^^  ^  
T:  tttaaagacttttctaaaaaaatccctgctaa.atgagtgagtcttaaactataatcttt
S:  ....agcact.........aacgcgctcataatatgatagtttctataagtagtatctag
    ^^^^ ^^   ^^^^^^^^^  ^^ ^  ^^   ^    ^^ ^^   ^^  ^  ^^    ^^
T:  gaatctttcatgcgttttgccaaaaggcggattgcccacaattaaatccactttgccgca
S:  caat.ttac..gcatttt......................atta........ttgct...
    ^   ^  ^ ^^  ^    ^^^^^^^^^^^^^^^^^^^^^^    ^^^^^^^^    ^^^^
T:  ttcataggctagaaaatctttgcaaatcaattccatctcaaaattgttaggaatgcaatc
S:  ttca...........atatat...aat..acgccatct.aaaatagctac...tttaatc
        ^^^^^^^^^^^  ^ ^ ^^^   ^^ ^^      ^     ^ ^  ^^^^ ^^    
T:  tttatataaaatctctaaaatttctaaactatttttatcaatatctatacactttaaata
S:  gctttg....atgttgggcgtttc..aattgtgttgat.agcgtcg.......ttaaatt
    ^^ ^ ^^^^^  ^ ^^^^^^    ^^  ^ ^ ^  ^  ^ ^^^  ^^^^^^^^      ^
T:  aacttttttaacagaagtgtattttttaaaaagagcacttaagaaattcccacaccctgc
S:  gagcgtttt....g..gtgtcctcc..aaaatcag...ttaa.aaatt.........tgg
    ^ ^^^    ^^^^ ^^    ^^ ^^^^    ^^  ^^^    ^     ^^^^^^^^^  ^
T:  acttggctctataatagtaacactctcttgtttaaagcttggcaataacttcgctatttc
S:  .cttcgc.caataat.gta....ttttttgtt.aaaccttgccacaaagt...ctagccc
    ^   ^  ^ ^     ^   ^^^^ ^ ^     ^   ^    ^  ^^  ^ ^^^   ^^^ 
T:  attaataataaaagggtttgtaaaatacgcgcttttttctatgcgtttagaattagacat
S:  ttta.tgat.....ggt..g.ataat..........ttaaatg.....agatttggcaaa
    ^   ^ ^  ^^^^^   ^^ ^ ^   ^^^^^^^^^^  ^^   ^^^^^   ^  ^ ^^ ^
T:  ttctgccaaactcactaaactcgctcttgcaatcttgttttgattttctaaaataaatcg
S:  ttctgcca...tgacatta.tcgct..tgc.............tttt..aaaatg....g
            ^^^ ^  ^^^ ^     ^^   ^^^^^^^^^^^^^    ^^     ^^^^^ 
T:  cttcaaattttgtggctctaataaatggtgcacatcaataagcctaatgatttctttagg
S:  catcg..ttttcattcgcta.taaa........atcatt.....taa..at..ctacagg
     ^  ^^^    ^^^^ ^   ^    ^^^^^^^^    ^ ^^^^^   ^^  ^^  ^^   
T:  ctctaagtgggtttgagacatgaa.attttttatctttatggcaatttgcttaaaaataa
S:  ctc.aac..........acctaaagatttattat..tgatc.caatct..ttaaacata.
       ^  ^^^^^^^^^^^  ^ ^  ^    ^    ^^ ^  ^^    ^ ^^     ^   ^
T:  tcgttggaacagcttcaccgatgctttgtcttatattcatttcgttttgtttggagattt
S:  .....gga.........ccgat...ttggcgg...tttgtttcttttggttcactgcatt
    ^^^^^   ^^^^^^^^^     ^^^   ^ ^^^^^  ^^    ^   ^   ^^^^ ^^  
T:  tttctttttcttgttggttaagggcgtttaattcttgtaattctaaatctaaccacttaa
S:  tttcaaaaattttat...taagccccatt...tc.....atac..aatctc.ccaca.aa
        ^^^^^^  ^^ ^^^    ^^ ^^  ^^^  ^^^^^  ^ ^^     ^^    ^^  
T:  aacggctagggatattcattaaaagcatcagctctctaatggaaaacactctatcatctt
S:  tacgattaat..tgttcttggattgcgt......tctaa.gg....cact........tt
    ^   ^^  ^^^^ ^   ^ ^^ ^^  ^ ^^^^^^     ^  ^^^^    ^^^^^^^^  
T:  tggggtggatcgtgttttggcta.gccatttggtcgtttcttgtatgaatgcaaggggca
S:  t.......atcccgttttaaataagccatataa.c.tatctt.ta...at...aggg..a
     ^^^^^^^   ^^     ^^^  ^     ^ ^^^ ^ ^    ^  ^^^  ^^^    ^^ 
T:  acgctatgatatttttgtcttttatatttatcgccatttttagaaacatttaagacaatc
S:  a.....................taaatcta.....aatt....aagcaattcagtta...
     ^^^^^^^^^^^^^^^^^^^^^  ^  ^  ^^^^^ ^  ^^^^  ^  ^  ^  ^^ ^^^
T:  ttactgccaacaattctatgaggttttttgtttaattctgtattctcaaacgcgctttgt
S:  ttaaggctaa..attatct......tttcgtttaaaatgatattc...aaca...ttaga
       ^^  ^  ^^   ^ ^ ^^^^^^   ^      ^^^^^     ^^^   ^^^^  ^ ^
T:  ccttcttttaaatccttaatccat.tcttgcatatgctttggataagttctaaaactatg
S:  ccaaatttt......tgaatcaatctctctcaaaccttctgga..a.ttgtag......g
      ^^^    ^^^^^^ ^    ^  ^   ^^  ^ ^^^ ^    ^^ ^  ^  ^^^^^^^ 
T:  ataaaaatccgtgttgtcatactcgccccaagcaagtggttttaacgatcctatcacttc
S:  ata................tacttg....aaacaagt........c.atccaaatagg..
       ^^^^^^^^^^^^^^^^    ^ ^^^^  ^     ^^^^^^^^ ^    ^ ^^ ^^^^
T:  ttttaaggttttttcttgtttgaaatcaggaaaaaattctaacgcgcttataaaatcttt
S:  ....agcgttgattagcgt................attctat...gcttag.....cttt
    ^^^^ ^^   ^^  ^^^  ^^^^^^^^^^^^^^^^      ^^^^     ^^^^^^    
T:  aaactctttacaaacccctatcactaaagttcttgttcggcttgaattagctccaaaatt
S:  g...tc....caa...........taa........ttcacc...aatt...t..aacctt
    ^^^^  ^^^^   ^^^^^^^^^^^   ^^^^^^^^   ^^ ^^^    ^^^ ^^  ^^  
T:  ttt.aaaattgattacctcatcatagagcatataatcgccactcaaattttgctctatca
S:  tttgaaaatagtttcactg..catggat..tgtaa....caa..aaatattgct......
       ^     ^ ^  ^^  ^^^   ^  ^^^ ^   ^^^^  ^^^    ^     ^^^^^^
T:  tagatcctatttctagcaaattatcatttttgtctatacaacctgttttataaaaactag
S:  taaat.....ttcta..aaaaca..attttaggata.agaag.tgtttt........t..
      ^  ^^^^^     ^^   ^^ ^^     ^ ^^  ^ ^  ^^      ^^^^^^^^ ^^
T:  ggacattttctaaaataaaaaatctgggtttgatttgtttgatcaaatcaatgctttcaa
S:  .ga....ttgaaaaataagttgttaaagttcgctat.ttt.atcaaataaa.g......a
    ^  ^^^^  ^^       ^^^^ ^^^^   ^ ^ ^ ^   ^       ^  ^ ^^^^^^ 
T:  ccaccaaagaattccgtttgatctcatcgtttttcttcttatgattggctacg.ctcatg
S:  cgacca.......................ttttta.....at..ttggaaacggctca..
     ^    ^^^^^^^^^^^^^^^^^^^^^^^     ^^^^^^  ^^    ^^   ^    ^^
T:  ccttgacaaggtggggttgctaccactaaatcaaccctatcattaccaaattttttagaa
S:  .....acaa..........c.acccctaaattaaaagggtcaatagcg...tttaaaaag
    ^^^^^    ^^^^^^^^^^ ^   ^      ^  ^^^^^   ^  ^ ^^^^   ^^ ^ ^
T:  taaaattcaatttgctttaaaattttttcttttgtttctggctttttaatgtccccacta
S:  taagaaacaa...gcaataataacctttcattt...........tttaa.......a..a
       ^ ^^   ^^^  ^^   ^ ^^^    ^   ^^^^^^^^^^^     ^^^^^^^ ^^ 
T:  atgtagctttcatctaatttgcatttgcgattaatcctttggatattcaagcgtttttct
S:  attga...tt.atct......catt....atagatcct....ataatc..gccatt..c.
      ^^ ^^^  ^    ^^^^^^    ^^^^  ^^     ^^^^   ^  ^^  ^^  ^^ ^
T:  aaaatttcattggtagcaacgcattcaaacccctcttctaaaagccc
S:  aaattttgatc..tatcatag..ttccta....tatcctaaaagccc
       ^   ^  ^^^  ^  ^^ ^^   ^^ ^^^^ ^ ^          
   56234    53413     32    none     57     61
    Errors = 14
T:  aaggtttgatcaaagagcataagggg.att.aaggattaaaccaaattcatttgaagcat
S:  aaggtttgattaaagagcataagggggatttaaagattggatcaagctcatttgaagcgt
              ^               ^   ^  ^    ^^ ^   ^^           ^ 
T:  t..aatgtttcaagctctcaa
S:  tttaatgctttaagctctcaa
     ^^    ^  ^          
   56288    53467     21    none     22     22
    Errors = 3
T:  tggtttcaaaagcctctttagtgcctgttcgtacgctagaaa
S:  tggtttcaaaggcctctttagtgcctgatcgcacgctagaaa
              ^                ^   ^          
   56312    53491    101    none      3      3
    Errors = 2
T:  caaactaaacaccacaatagcta
S:  caaactaaacgcaacaatagcta
              ^ ^          
   56432    53611     29    none     19     19
    Errors = 2
T:  tagccccagaaagcatgccagcaatcgctccaatgcgcg
S:  tagccccagagagcatgccagcaatcgcgccaatgcgcg
              ^                 ^          
   56480    53659     47    none     19     19
    Errors = 4
T:  accaaaaaagcgagaataaaatcacagatccaaaactcg
S:  accaaaaaagtgaaaacaaaatcacagagccaaaactcg
              ^  ^  ^           ^          
   56541    53720     58    none     14     14
    Errors = 3
T:  cgatgctgagaatgctggcgtttctatccgttga
S:  cgatgctgaggatgctagcgtttttatccgttga
              ^     ^      ^          
   56626    53805    144    none     27     27
    Errors = 4
T:  gcctagaaatagccatcactaatttttgtggggcgtctttattgaaa
S:  gcctagaaatcgtcatcactaatttttggggggcgtttttattgaaa
              ^ ^               ^       ^          
   56771    53950     35    none      1      1
    Errors = 1
T:  attgactcatcacaatgaaaa
S:  attgactcattacaatgaaaa
              ^          
   56825    54004     35    none     19     19
    Errors = 3
T:  ctaaactcaaatcaaatttatgcacatacgcaacgccta
S:  ctaaactcaagtcaaatttatgtacataagcaacgccta
              ^           ^     ^          
   56861    54040    110    none      1      1
    Errors = 1
T:  atgccccaatcaaagaaataa
S:  atgccccaattaaagaaataa
              ^          
   56972    54151     23    none      1      1
    Errors = 1
T:  aatagcctaagccccaagcaa
S:  aatagcctaacccccaagcaa
              ^          
   56996    54175     98    none      1      1
    Errors = 1
T:  ttgaaataatggcgactacgc
S:  ttgaaataatagcgactacgc
              ^          
   57095    54274     59    none      1      1
    Errors = 1
T:  ggattatcatcacgatcggca
S:  ggattatcataacgatcggca
              ^          
   57173    54352     86    none     19     19
    Errors = 2
T:  aatccgtccaacacaccgccttatacccccctaaaaagg
S:  aatccgtccagcacaccgccttataccctcctaaaaagg
              ^                 ^          
   57260    54439     83    none      1      1
    Errors = 1
T:  caaagagtttggccccactca
S:  caaagagtttagccccactca
              ^          
   57344    54523     38    none      1      1
    Errors = 1
T:  agatgtgtttgtcatcgctaa
S:  agatgtgtttatcatcgctaa
              ^          
   57386    54565     35    none      4      4
    Errors = 2
T:  ctgaaatggtgatggaattagcga
S:  ctgaaatggtaatagaattagcga
              ^  ^          
   57425    54604     20    none      4      4
    Errors = 2
T:  tgcgtaagcgtttggccacaaaaa
S:  tgcgtaagcgcttagccacaaaaa
              ^  ^          
   57515    54694     26    none     70     70
    Errors = 8
T:  cccagttaatcaatgcgcccaaactcaaccctatggcgatatgtgagttgataagccctc
S:  cccagttaatgagtgcgcccaaactcaagcctatggcgatgtgtgaattgataagccccc
              ^ ^               ^           ^     ^           ^ 
T:  ccacatataaagctccaggcaatcccatta
S:  ccacatataaagctcccggtaatcccatta
                    ^  ^          
   57557    54736     26    none     16     16
    Errors = 4
T:  acccgctcatatcgctcgcccccgcgctcaaagcgc
S:  acccgctcatgtcgctcgctcctgcactcaaagcgc
              ^        ^  ^  ^          
   57587    54766     85    none      4      4
    Errors = 2
T:  cagggcccatggaacgatcgccta
S:  cagggcccatagagcgatcgccta
              ^  ^          
   57673    54852     21    none      1      1
    Errors = 1
T:  gaataaacgataaacatcgta
S:  gaataaacgacaaacatcgta
              ^          
   57695    54874    118    none      1      1
    Errors = 1
T:  caataggggtacttaaaacaa
S:  caataggggtgcttaaaacaa
              ^          
   57823    55002     50    none     10     10
    Errors = 3
T:  tcccataacggtgataagagatgctaaccg
S:  tcccataacgatgatacgaaatgctaaccg
              ^     ^  ^          
   57880    55059     29    none      7      7
    Errors = 3
T:  aacgcccatttaggcatggtttagccg
S:  aacgcccattcaagcagggtttagccg
              ^ ^   ^          
   57916    55095     55    none      7      7
    Errors = 4
T:  ccatccctaaagcgctcgcttgttcgt
S:  ccatccctaatctgcttgcttgttcgt
              ^^^   ^          
   57979    55158     32    none      8      8
    Errors = 3
T:  cgattgaaagtattcaatttctcgctaa
S:  cgattgaaagcgttcaacttctcgctaa
              ^^     ^          
   58051    55230     22    none     40     40
    Errors = 4
T:  tttcataaacaataggggcgcttgcttggagcgcttttaagcattctaagaaaaaggtta
S:  tttcataaacgataggggcgtttgcttggagtgcttttaagcattctaaaaaaaaggtta
              ^         ^          ^                 ^          
   58074    55253     20    none      1      1
    Errors = 1
T:  tctttgttcgttcgttcgttt
S:  tctttgttcgctcgttcgttt
              ^          
   58095    55274     24    none      1      1
    Errors = 1
T:  tctatgctgagcgttaaaggg
S:  tctatgctgatcgttaaaggg
              ^          
   58120    55299     66    none      1      1
    Errors = 1
T:  gagaaattaaacatgctaaag
S:  gagaaattaagcatgctaaag
              ^          
   58187    55366     57    none      1      1
    Errors = 1
T:  gcccacgcttttaactttagt
S:  gcccacgcttgtaactttagt
              ^          
   58264    55443     38    none     20     20
    Errors = 3
T:  tagtctttagtttggctgaattcatgtttgtaatgataag
S:  tagtctttagcttggctgaattcatgcttataatgataag
              ^               ^  ^          
   58321    55500     20    none     19     19
    Errors = 3
T:  aaatcgcgcgcttcaactcatgcgtatgctcatcatagc
S:  aaatcgcgcgtttcaactcatgcgtgtgttcatcatagc
              ^              ^  ^          
   58354    55533     32    none     13     13
    Errors = 5
T:  ctttttgagttaagttttctaaggcttcgctta
S:  ctttttgagtcaagccctctaaagcttcgctta
              ^   ^^^     ^          
   58404    55583    114    none     18     18
    Errors = 4
T:  aggcgttttcgtcttcttcttcttggcagatattcaca
S:  aggcgttttcatcttcttcttcttgatggatattcaca
              ^              ^^^          
   58519    55698     65    none      1      1
    Errors = 1
T:  ctgtggtgggcttgttgatat
S:  ctgtggtgggtttgttgatat
              ^          
   58585    55764     39    none      1      1
    Errors = 1
T:  tttcgtccaacgactctaacg
S:  tttcgtccaaagactctaacg
              ^          
   58659    55838    101    none     35     35
    Errors = 3
T:  ggtagaattggctatttctatcgcttcgtctaaatcttttgcttccatcacggat
S:  ggtagaattgactatttctatcgcctcgtctaaatcttttgctttcatcacggat
              ^             ^                   ^          
   58774    55953     26    none     14     14
    Errors = 4
T:  gggttatcattgacaaagcttaccgggatttcgt
S:  gggttatcatcaacaaagcttgctgggatttcgt
              ^^         ^ ^          
   58801    55980     50    none      1      1
    Errors = 1
T:  catagctttttaattcatcta
S:  catagcttttcaattcatcta
              ^          
   58852    56031     71    none      1      1
    Errors = 1
T:  ccgctagagcgccgattttgt
S:  ccgctagagcaccgattttgt
              ^          
   58927    56106     29    none      4      4
    Errors = 2
T:  gagtctttttaaagttctcatctt
S:  gagtctttttgaaattctcatctt
              ^  ^          
   58957    56136    101    none      1      1
    Errors = 1
T:  ctttttctaatactaaaagcg
S:  ctttttctaacactaaaagcg
              ^          
   59059    56238     29    none      1      1
    Errors = 1
T:  tgctcacaatggtggcgtttt
S:  tgctcacaatagtggcgtttt
              ^          
   59089    56268     20    none      1      1
    Errors = 1
T:  tttcagcgctcaaggctaaag
S:  tttcagcgcttaaggctaaag
              ^          
   59115    56294     21    none      6      6
    Errors = 3
T:  tggggttagcttttaacattttataa
S:  tggggttagccttgagcattttataa
              ^  ^ ^          
   59185    56364     74    none     49     49
    Errors = 5
T:  cggtgtcttcgcccccggttaaaatggcaaactggatgctttcatctcttaaaagatgtt
S:  cggtgtcttcaccccctgttaaaatggcaaacttgatgctttcatcttttaaaagatgct
              ^     ^                ^             ^          ^ 
T:  cgctaatat
S:  cgctaatat
             
   59272    56451     47    none     13     13
    Errors = 2
T:  aaaagcactcacaaagcttatagcccgttacgc
S:  aaaagcactcgcaaagcttataacccgttacgc
              ^           ^          
   59323    56502     53    none      4      4
    Errors = 3
T:  cccgattgcccgtagctagggggg
S:  cccgattgccagcggctagggggg
              ^ ^^          
   59434    56613    107    none     58     58
    Errors = 8
T:  aattccatggggcaatgaccacgcccacgcctttaggggtgaattgcgtttttgtgtttt
S:  aattccatggagcgatgaccacacccacgcctttgggggtgaatttcgtttttttatttt
              ^  ^        ^           ^          ^       ^ ^    
T:  gctcttgcaacaccctta
S:  gctcttgtaacaccctta
           ^          
   59542    56721     29    none      1      1
    Errors = 1
T:  aaatccctatcaaatcgcctc
S:  aaatccctattaaatcgcctc
              ^          
   59605    56784     65    none     34     34
    Errors = 4
T:  taaaaagctgggcggtttgactcattaaggcatggatttctgtaaagctttttt
S:  taaaaagctgagcggtttgactcaataaagcatggatttctgtgaagctttttt
              ^             ^   ^              ^          
   59671    56850     20    none      1      1
    Errors = 1
T:  aaatcgcttccttatccgcta
S:  aaatcgcttctttatccgcta
              ^          
   59692    56871     46    none      1      1
    Errors = 1
T:  aatgcacgctagcgatttttt
S:  aatgcacgctggcgatttttt
              ^          
   59739    56918     24    none      1      1
    Errors = 1
T:  aaaggggttagattaggatct
S:  aaaggggttaaattaggatct
              ^          
   59767    56946     23    none      4      4
    Errors = 2
T:  acctcccatccatctctgggtaaa
S:  acctcccatctatttctgggtaaa
              ^  ^          
   59806    56985     83    none     16     16
    Errors = 3
T:  ctaaaataggagcgttacgcattttctcgcgcactt
S:  ctaaaataggggcgttatgcattttatcgcgcactt
              ^      ^       ^          
   59959    57138     26    none     70     70
    Errors = 9
T:  ggtttgggtaagtggtatgcccgctttgtttggcgttcctatcttgagtcctatgggtgg
S:  ggtttgggtaggtggtatgcccggtttgtttggcgtttctgtcttgggtcctgtgggtgg
              ^            ^             ^  ^     ^     ^       
T:  cattgtctaaagtggcaattcctttaaggc
S:  tattgtctaaagtggcgatccctttaaggc
    ^               ^  ^          
   59992    57171     41    none      7      7
    Errors = 2
T:  aaaagcgttgttcttgatctttccatt
S:  aaaagcgttgctcttggtctttccatt
              ^     ^          
   60034    57213     20    none      1      1
    Errors = 1
T:  taaagaaagccttcatgaaat
S:  taaagaaagctttcatgaaat
              ^          
   60069    57248     21    none     15     15
    Errors = 3
T:  tatcgcttgaggtgttttcgtctaacctcctcacc
S:  tatcgcttgaagtgttttcatctagcctcctcacc
              ^        ^    ^          
   60100    57279     38    none     10     10
    Errors = 2
T:  agtaagcgatcgcattgttaaaatgcgctt
S:  agtaagcgattgcattgttgaaatgcgctt
              ^        ^          
   60175    57354     26    none     37     37
    Errors = 3
T:  aaagaatgagcttgtgcatctcttttagttcctggctcgcttgcaaactcatgccct
S:  aaagaatgagtttgtgcatctcttttaattcctggctcgcttgcaagctcatgccct
              ^                ^                  ^          
   60202    57381     20    none      1      1
    Errors = 1
T:  tttcaaagctgaaatgctcta
S:  tttcaaagctaaaatgctcta
              ^          
   60256    57435     20    none     34     34
    Errors = 4
T:  acacaacaggatcattaatggcatggatacgcgtatagacataagcgatttcaa
S:  acacaacagggtcattaagggcatggatgcgcgtatagacataggcgatttcaa
              ^       ^         ^              ^          
   60286    57465     23    none     10     10
    Errors = 2
T:  aaatattatgactcgctgcgccaatatgaa
S:  aaatattatggctcgctgcaccaatatgaa
              ^        ^          
   60310    57489     22    none      1      1
    Errors = 1
T:  atttataattatcgccctcta
S:  atttataattgtcgccctcta
              ^          
   60340    57519     27    none      8      8
    Errors = 2
T:  acaaaatccaacattttattgtaattag
S:  acaaaatccagcattttgttgtaattag
              ^      ^          
   60370    57549     20    none      3      3
    Errors = 2
T:  gtcttgcttattggaaaatgtgg
S:  gtcttgcttactagaaaatgtgg
              ^ ^          
   60412    57591     44    none     22     22
    Errors = 5
T:  gtaacgcccaatctttcacggaagcgatagtttcttcgctct
S:  gtaacgcccagtctttcatagaagcgatcgtctcttcgctct
              ^       ^^        ^  ^          
   60463    57642     62    none      7      7
    Errors = 2
T:  ggattttaatgggcttcaaccctttta
S:  ggattttaataggctttaaccctttta
              ^     ^          
   60601    57780     20    none     76     76
    Errors = 11
T:  cataagaatccggaatataggcttgcagcacaataccagcgttcaaatcaaatttagcga
S:  cataagaatcagggatataagcttgcaacacaataccggcgttcaaatcaaatttggcga
              ^  ^     ^       ^         ^                 ^    
T:  tggattccataaacgactccactgttagctctaaat
S:  tagactccataaacgattccaccgtaagctctaaat
     ^  ^           ^     ^  ^          
   60634    57813     23    none     13     13
    Errors = 2
T:  ccctaaattcttccatatccaaattgatgaatt
S:  ccctaaattcctccatatccaagttgatgaatt
              ^           ^          
   60658    57837     20    none      1      1
    Errors = 1
T:  gcatgccttgttttttttctt
S:  gcatgccttgctttttttctt
              ^          
   60699    57878     63    none     21     21
    Errors = 5
T:  cttctaaagccagggcgtaaagagcgtctaggcgtttgaca
S:  cttctaaagctaaagcataaagagcgtctaagcgtttgaca
              ^ ^^  ^             ^          
   60763    57942     69    none      1      1
    Errors = 1
T:  aaaaaatcgtcgtgattttaa
S:  aaaaaatcgttgtgattttaa
              ^          
   60835    58014     20    none      3      3
    Errors = 3
T:  aaaacgcgcattagcttcttctt
S:  aaaacgcgcagacgcttcttctt
              ^^^          
   60892    58071     27    none     37     37
    Errors = 4
T:  cgcctaaaacctcttcgccaataaaattcacattcaaaatgattttttcattttttc
S:  cgcctaaaacttcctcgccaataaaattcacgttcaaaatgattttctcattttttc
              ^  ^                 ^              ^          
   60925    58104     26    none      6      6
    Errors = 2
T:  aatccgctcttttaactggctctctt
S:  aatccgctctcttaattggctctctt
              ^    ^          
   60952    58131     53    none      1      1
    Errors = 1
T:  ccaagaccatcgctttcgtgt
S:  ccaagaccattgctttcgtgt
              ^          
   61006    58185     36    none      1      1
    Errors = 1
T:  tcatatcagggagcattttcc
S:  tcatatcaggcagcattttcc
              ^          
   61056    58235     72    none     14     14
    Errors = 3
T:  cattaaaagcactttttcaaacggagaaaaaatc
S:  cattaaaagccatttttcaaacgaagaaaaaatc
              ^^           ^          
   61135    58314     23    none      7      7
    Errors = 2
T:  tattgtccaagcacctgaaactccgat
S:  tattgtccaaacacctaaaactccgat
              ^     ^          
   61177    58356     27    none     19     19
    Errors = 2
T:  taagctctatgagcatgactttgttttcagggttgttta
S:  taagctctataagcatgactttgttttcggggttgttta
              ^                 ^          
   61225    58404     49    none     21     21
    Errors = 4
T:  ttgcattttagagtggaacgctttttcctgatcgctcaaat
S:  ttgcattttaaaatggaacgctttttcttgctcgctcaaat
              ^ ^              ^  ^          
   61282    58461     43    none      8      8
    Errors = 3
T:  gctaattctagcgaatcgtcaatgattt
S:  gctaattctaatgaatcctcaatgattt
              ^^     ^          
   61326    58505     73    none      1      1
    Errors = 1
T:  taagaatttgacttgattgta
S:  taagaatttggcttgattgta
              ^          
   61407    58586    111    none      8      8
    Errors = 3
T:  tttaaattttgttctagcggtaattaat
S:  tttaaattttattccagtggtaattaat
              ^   ^  ^          
   61532    58711     56    none     14     14
    Errors = 2
T:  tttcgtttaataataaattataacattcgcatcg
S:  tttcgtttaaaaataaattataatattcgcatcg
              ^            ^          
   61603    58782     39    none     15     15
    Errors = 3
T:  taaacggatttacaaaaaattttacaaa.caaagga
S:  taaacggattgacaaaaa.ttttacaaaacaaagga
              ^       ^         ^       
   61661    58840     20    none     19     19
    Errors = 3
T:  aaaatggtatgatgattggcacactcggcgcgttgttat
S:  aaaatggtattatgatcggcacactcggtgcgttgttat
              ^     ^           ^          
   61682    58861     30    none      1      1
    Errors = 1
T:  tgagcggttgctctagctttg
S:  tgagcggttgttctagctttg
              ^          
   61769    58948     32    none     57     57
    Errors = 9
T:  tttcgcttgtattcctaaagaccattctctaaaagacgcttccacaaaaaaagaagtgca
S:  tttcgcttgtctccctaaagaccattcttcaaaagacgcttctaccaaaaaagaagcgca
              ^ ^               ^^            ^  ^          ^   
T:  atacacgcctaagggct
S:  atacattcctaagggct
         ^^          
   61811    58990     26    none     10     10
    Errors = 2
T:  attcttctaatttaaaccactgggattcta
S:  attcttctaacttaaaccattgggattcta
              ^        ^          
   61863    59043     40    none     26     27
    Errors = 6
T:  aggggtttattagatggggcaaaaaaagggaggg.ataataaagctc
S:  aggggtttatgagagggggcgaaaaaaggggggggaaaataaagctc
              ^   ^     ^         ^   ^ ^          
   61927    59108     42    none     24     25
    Errors = 7
T:  acaataacaaccttttttaacattgatatgagataaaa..ggagat
S:  acaataacaatcttttt.aacactgatataatataaaaaaggagat
              ^      ^    ^      ^ ^      ^^      
   62019    59203     33    none     50     53
    Errors = 25
T:  ttgtagaaaacatgaatac..agaaaata.......cgaatatttcaagaacgactgctt
S:  ttgtagaaaatgcgaataatgagaaaatagaaaaaccaaatacttcaaatcccactgctt
              ^^^     ^^^        ^^^^^^^ ^    ^     ^^^ ^       
T:  ccaccccccccccccccca
S:  ccaccccccccc......a
                ^^^^^^ 
   62149    59342     29    none     97    106
    Errors = 26
T:  tttaaaatctgttggagatcttacagatcgctttaaaaaattagaag.tcc..aattaga
S:  tttaaaatctattacagatcttaaagatcgccttaaaaaattagaagatcttaaattaga
              ^  ^^        ^       ^               ^  ^^^       
T:  agaccttgaaccccttatcaaaatctctcgttacatag.....gatccttt.tttagaaa
S:  agactttgaaccccttagaaaactctctcattttatagttataggtaatttgtttggaaa
        ^            ^^   ^      ^  ^^    ^^^^^ ^ ^^   ^   ^    
T:  atcctc
S:  atcctc
          
   62502    59848     24    none    324    477
    Errors = 245
T:  ccaagaaaactcaaaagacgctcaaaaaa..aagaggaagcgcttaaagaagtccaagaa
S:  ccaagaaaacccaaaagacgctttaaaatccaccaatttccacgagaaacacaccaaacc
              ^           ^^    ^^^ ^^ ^^^^^ ^ ^^^  ^^ ^^    ^^^
T:  ga...aaacgac.gagctgaaaaccgaaaaagacaatttaactaaagcaaacactgagct
S:  gactgaaaccaccgaactagttgaagaaaataaagcgctaaccacagaaaaagaaaggct
      ^^^    ^  ^  ^  ^^^^^^^     ^^ ^^^^^    ^ ^  ^   ^^^^^^   
T:  .gactgacaaaaataaagttctaattacagaaaaagaaaatctaactaatcagcttaatg
S:  agaaagagaaaa.taaaaacctaactgcagacaaagaaaacctaactaaagaaaaaaccg
    ^  ^^  ^    ^    ^^^    ^ ^    ^        ^        ^^ ^^^^ ^^ 
T:  catcacaaaagcaagcgaaagagttagaacaatctcagcaagttttagaaaatgaaaaag
S:  aattacaaaaacaagtgaatgagttaaaaaactctaagcaagttttagaaaatgaaaaag
    ^  ^      ^    ^   ^      ^  ^ ^   ^                        
T:  ....ttg............ag.....ctaac.................taac..aaga..
S:  ccgattggctaagagaaaaagaaaatctaaccaaagacagagaaaacctaactaaagaaa
    ^^^^   ^^^^^^^^^^^^  ^^^^^     ^^^^^^^^^^^^^^^^^    ^^    ^^
T:  ..............................tcacc.........gat...ttatcaaaag
S:  aaacagagctgactgaaaaaaataaagtgctaaccacagaaaaagaaaggttagccacag
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ^   ^^^^^^^^^  ^^^^   ^ ^ ^  
T:  aaaaagacaatctagttaaagcaaacaccga.....................gctgaaaa
S:  aaaaagaaaacctaactaaagaaaaaaccgaatcacaaaaacaagtgaatgagttaaaaa
           ^  ^   ^^     ^   ^     ^^^^^^^^^^^^^^^^^^^^^ ^ ^    
T:  cc...............gaaaaagaaaa......tct.................agctaa
S:  actctaagcaagttttagaaaatgaaaaagccgatctgaccaacgaaaacaccaagctaa
    ^ ^^^^^^^^^^^^^^^     ^     ^^^^^^   ^^^^^^^^^^^^^^^^^      
T:  a....gaaaaaacagatc
S:  aaacagataaaacagatc
     ^^^^  ^          
   62751    60103     34    none    225    231
    Errors = 91
T:  tgaaaaaaataaagttctaattacagaaaaagaaaatctaactaatcagcttaatgcatc
S:  tgaaaaaaatcaaaggctaaccacagaaaaaacagaattaaataacaagattactgggtt
              ^  ^^^    ^^         ^^ ^ ^^   ^   ^^  ^   ^  ^^ ^
T:  a.caaaagcaagcgaaagagttagaa.caatctcagcaagttttaaaaaatgaaaaagcc
S:  agccacagaaaaagaaag.gttagccgcagacaaagaaaacctaactaaagaaagcagac
     ^ ^ ^  ^  ^^     ^     ^^^  ^^ ^^  ^  ^^^ ^ ^^   ^^  ^^  ^ 
T:  ...gaattgttaagagaaaaagaaa..atctcaat.a.cagatttatcaaatgcaaaaag
S:  aaagaaaacctaactaaagaaaaaacaatctaaacgatcagcttaa.cgcat.cacaaac
    ^^^   ^^^^   ^^^  ^  ^   ^^    ^  ^^ ^   ^  ^ ^ ^^  ^  ^   ^
T:  ccaagtaatccaagcgaaccaagaaaaagacaatctagagcaaaaatacgctccatacaa
S:  ccaagccgaacaaacgagccgaaaactaaacgagctagagcgaaggcacgctccatacca
         ^^^^^   ^   ^  ^ ^  ^^ ^  ^ ^       ^  ^^^           ^ 
T:  aaagttagaaaaac
S:  aaaattagaaaaac
       ^          
   62847    60199     33    none     62     62
    Errors = 11
T:  ttggaagtcagagggtgcttgaattttggatttgtagcaacaactcatagcgcaatggat
S:  ttggaagtcaaagatcgcttgaattttaattttgtagcaacaactcacagcgcaatggac
              ^  ^^^           ^^^                 ^           ^
T:  ttgatcgcatacgttcttagcg
S:  ttgatcgcatctgttcttagcg
              ^^          
   62919    60271     61    none     39     39
    Errors = 5
T:  tttagaaagcctttataacaaagcgagccaagaattaagcgataagaagagcgataaag
S:  tttagaaagcttttataaccaagcgagccaagaattaggcgataagagaagcgataaag
              ^        ^                 ^         ^^          
   62982    60334     39    none      2      2
    Errors = 2
T:  attaaggataagaaatttgagc
S:  attaaggatagtaaatttgagc
              ^^          
   63033    60385     34    none     12     12
    Errors = 3
T:  ttatgactatacatgcaaaagcctatacccag
S:  ttatgactattcatgcaaaaagctatacccag
              ^         ^^          
   63120    60466     25    none     53     47
    Errors = 22
T:  caaaagatgcaaagggtggtcttaatcggctatacatacgacaaaaaaacaccaccatat
S:  caaaagatgcgaagagtggttttaagaggctataagcacaatgataaaatg......tat
              ^   ^     ^    ^^       ^^^  ^ ^^ ^    ^^^^^^^^   
T:  tatactatcgtgg
S:  cacactatcgtgg
    ^ ^          
   63559    60988     31    none    414    497
    Errors = 190
T:  ggatcataaaatgggaacattcattgaaaaatgttttggcttctatcaagtgaggaaaga
S:  ggatcataaa.tgggaacgctcattgaaaaatggtttggcttctctcaaatcagagaaga
              ^       ^^             ^          ^    ^ ^  ^^    
T:  gttagaagctcgcatcagtgggttagaagatgaaaacgctgagctatttgcagaaaacga
S:  attagaagctcgcatcagtgagttagaagacgaaaacaccgaattgttaagagaaagaga
    ^                   ^         ^      ^ ^  ^^ ^  ^^^     ^^  
T:  aaaattagctttaggaactagtgagttaaaagacgccaacaatcaattaaggcaaaaaaa
S:  atacttagctgcagaaactagcgagttaaaagacgctaacgatcaattacggcaaaaaaa
     ^ ^      ^^  ^      ^              ^   ^        ^          
T:  cgacaaactattcacaacaaaagaaaacctaactcaagaaaaaacagaactgactgaaaa
S:  cgacaagttattcataacaaaagacaagctaaccaaagaaaacaccgagttattcgcaga
          ^^      ^         ^  ^     ^^       ^  ^  ^^ ^^^^ ^ ^ 
T:  aaat.aaag.tt..ct.....aaccacagaaaaaggaaa.tctagacaatcagcttaatg
S:  aaacgaaagcttatctgtaaaaatcagcgggttagaacactcta.acgatcaa.ttatgg
       ^^    ^  ^^  ^^^^^  ^  ^^ ^^^^  ^ ^ ^    ^  ^    ^^   ^^ 
T:  catcacaaaagcaagtgca....agcgttag...aac...aatctcagcaag...tttta
S:  caaaacaataacaagctcactaaagaaaaagcagaactgaaaacggaaaaagacatttta
      ^^    ^ ^    ^^  ^^^^  ^^^^  ^^^   ^^^  ^ ^^ ^^   ^^^     
T:  gaaaatgaaaa.....................agttgagctaactaacaagatcaccgat
S:  gctaaagaaaacacacgcttattagcagccagagatcggctgactgaagaaaaaagagaa
     ^^  ^     ^^^^^^^^^^^^^^^^^^^^^  ^ ^^   ^   ^ ^^ ^ ^^ ^^  ^
T:  ttatcaaaagaaaaagaaaatctaactaaagcaaacaccgagct................
S:  ttgacaacagaaaaagaaaggctaaaaagagaaaacaccgagctaacccataaaatcacc
      ^^   ^           ^^    ^^ ^  ^            ^^^^^^^^^^^^^^^^
T:  ............gaaaa..............ccgaaaacg
S:  gagctgactaaagaaaataaagcactaaccaccgaaaacg
    ^^^^^^^^^^^^     ^^^^^^^^^^^^^^         
   63636    61065     22    none     46     46
    Errors = 8
T:  caccaagttatcgcgctcactaaagagcaggatagccttaaacaagagcgagcgcaattg
S:  caccaagttaccgcgctcactaatgagcgagatagtctcgaacaagagcgagcgcgattg
              ^            ^    ^^     ^  ^^               ^    
T:  caagat
S:  caagat
          
   63917    61382     22    none    259    295
    Errors = 87
T:  gcatgggtttttagaagaattatgcgctaatttagaaaaagacaaccaacacctaaccga
S:  gcatgggtttctagaaaaacgatgcaccaatttagagaaagaaaaccaacgcctaactga
              ^     ^  ^^    ^ ^        ^     ^       ^      ^  
T:  caaactcaaaaagttagaaagcgctcaaaaaaatttagaaaattctaacgatca......
S:  caagctcaaacaattagaaagcgctcaaaaaagcttggaaaacactaacaatcaattacg
       ^      ^ ^                   ^^  ^     ^^     ^    ^^^^^^
T:  ....gct....................atta...caggctatagaaaacatagccgaaga
S:  gcaagctttagaaaactctaatgtccaattagcacaagctaaagaaaaaatagccataga
    ^^^^   ^^^^^^^^^^^^^^^^^^^^    ^^^  ^    ^      ^      ^^   
T:  aaaaacagaattggagcgagaaatagcgcgcttgaagagcttagaagccacaga...caa
S:  gaaaagcgagctggagcgagaaatcgcacgcttgaagagcttagagggtatggaagccaa
    ^    ^^  ^^             ^  ^                 ^ ^^ ^^  ^^^   
T:  aagcgagctggacttgcaaaactgtcgttttaaaagcgcgatagaggatctcaaacgcca
S:  aagcgatctggacttacacaacaggcgtttagcgagcgcaaacgaggatttaaaacgcca
          ^        ^  ^   ^ ^     ^^^^     ^ ^^      ^ ^        
T:  aaacagaaaattaga
S:  aaaccgaaaattaga
        ^          
   64073    61538     31    none    134    134
    Errors = 29
T:  aagagaacatagcgctcaaagagagggcttatggcttgaaagagcaaccctcaaaa...c
S:  aagagaacatcgccctcaaagagagggttgatggcttgaacgagcagctctccaaattgc
              ^  ^             ^ ^          ^     ^ ^   ^   ^^^ 
T:  aacca...aaaccataattaaaggagaaatatcatggtaacacccttaaaaagtttaaaa
S:  aaccacaaaaaccacaat.aaagga..aatatcatggtaaaaga...aaaaagtttagaa
         ^^^      ^   ^      ^^             ^ ^^^^^          ^  
T:  ctgcctattggccacccgttagtagagattttgtgcgagc
S:  ctgcctcttggccaccccttagtagagaaattgtgcgagc
          ^          ^          ^^          
   64212    61677     25    none    108    108
    Errors = 20
T:  aataaagccgtattcaatgaagaagctccgattaatttcaaaaaagaagtgtcagaagaa
S:  aataaagccgcattcaatgaaaaaagtgagccgaatttcaaagatgaagtgtcagaagaa
              ^          ^  ^^ ^^ ^^^         ^ ^               
T:  gagaaaatcaagttcaagcaagcgctaagagtgcttcatgcgattgtcaataatgaggct
S:  gacaaaatcaaattcaaacaagcgctgcgggtgtttcatgcgatcgtcaataatgagact
      ^        ^     ^        ^^ ^   ^          ^            ^  
T:  tctttaag
S:  tctttaag
            
   64274    61739     29    none     37     37
    Errors = 6
T:  tttctgatgacaatcaaaaattcatggagggtttagcgcaagctgacaagatcacta
S:  tttctgatgaaaatcaaaaattcctagaggatttagcgcaagctaaaaagatcacta
              ^            ^ ^    ^             ^ ^          
   64320    61785     26    none     17     17
    Errors = 3
T:  tagaaaaaacattagaaatcgtttcttatagcgatgt
S:  tagaaaaaaccttagagatcgtttctgatagcgatgt
              ^     ^         ^          
   64380    61845     30    none     34     34
    Errors = 9
T:  ggattttgaagcgtttaaagaaatgatgctcaaagtggataacatagcggtagg
S:  ggattttgaaaagcttaaaaaattgatgctcaatgtggatagtgtagcggtagg
              ^^ ^     ^  ^          ^       ^^^          
   64428    61893     20    none     18     18
    Errors = 2
T:  tatagccaaagccaattgcttgatttgaacggagggca
S:  tatagccaaaaccaattgcttgatttggacggagggca
              ^                ^          
   64464    61929     35    none     16     16
    Errors = 5
T:  ttgggatttagatgtgcctagcttgtctaaagaaag
S:  ttgggatttataggcgcctagcgtgcctaaagaaag
              ^ ^ ^       ^  ^          
   64580    62027     35    none     81     63
    Errors = 31
T:  tgataatttacccaaagaagaaatcggcggagaagagatagaaaagaatttctatgcccg
S:  tgataattta......gactctagcggc....aa.....agaaatggatttttatgcgcg
              ^^^^^^  ^^^^ ^    ^^^^  ^^^^^     ^ ^    ^     ^  
T:  ttcaagtttgaaagatgtaaacaagcagggtgttgtcgcta
S:  ctcaagtttgaaggatttaaacaag...ggcgttgtcgcta
    ^           ^   ^        ^^^  ^          
   64646    62093     21    none     31     31
    Errors = 7
T:  aaagcacgactgcagcttacatggataacaacggaaaataccgcttgctct
S:  aaagcacgaccgcagcctatatggataagaacggggaataacgcttgctct
              ^     ^  ^        ^     ^^    ^          
   64763    62210     30    none     96     96
    Errors = 29
T:  tattggcggggatgtagatatagagagtttgcaaaaatatgaaaaccccacgatagtgga
S:  tattggcgggctagtagatgacgcaagcctgacaaagtttgaaaaccctacgatcgtgga
              ^^^      ^^^ ^^  ^^  ^^   ^ ^         ^     ^     
T:  gttcagatataaagaaaagtttcttaaagattacaacgctttaagccaccgccctt
S:  gttcagacacataaaaaaatttattacagaatacaacgcactagatcaccgccctt
           ^ ^ ^ ^    ^   ^   ^   ^        ^^  ^^^          
   64794    62241     23    none      1      1
    Errors = 1
T:  gaacgatatacaagtggcgca
S:  gaacgatatagaagtggcgca
              ^          
   64863    62310     33    none     46     46
    Errors = 12
T:  agcccaaaaggaactttcaagcgctcaaggtaatcatttttatcggtttttttctcaatt
S:  agcccaaaagaacgctgcaatcgttaaagggaatgatttgtatcggtttttttctaaatt
              ^ ^^^ ^   ^  ^ ^    ^   ^    ^               ^    
T:  gaagca
S:  gaagca
          
   64915    62362     24    none     19     19
    Errors = 5
T:  gatgaaaaacggaattttagggatctcatagaggatttt
S:  gatgaaaaacagaattttagggatttagaagaggatttt
              ^             ^ ^^^          
   64944    62391     34    none      5      5
    Errors = 2
T:  tagaaagcttcactaattgcacgga
S:  tagaaagctttactcattgcacgga
              ^   ^          
   64995    62442     49    none     17     17
    Errors = 4
T:  aaatctatgcatactgcatcggccgttgcatcaacaa
S:  aaatctatgcttactgcatcagccgcagcatcaacaa
              ^         ^    ^^          
   65045    62492     52    none      1      1
    Errors = 1
T:  ttttatcctatcccatcaagt
S:  ttttatcctaccccatcaagt
              ^          
   65098    62545     22    none      1      1
    Errors = 1
T:  agttttgaaaaaggcttgaaa
S:  agttttgaaagaggcttgaaa
              ^          
   65121    62568     33    none      1      1
    Errors = 1
T:  atccttacccaggcatgtttt
S:  atccttaccccggcatgtttt
              ^          
   65173    62620     52    none     19     19
    Errors = 4
T:  acggctaaaatgttcaaagtggaattaaaagcgagcgag
S:  acggctaaaactttcaaagtggaattgagagcgagcgag
              ^^              ^ ^          
   65253    62700     28    none     28     28
    Errors = 9
T:  ctacgggtttgataaatttgcaaaattagacaagcccatttattacgg
S:  ctacgggttttttaaatcagagaagttagacaagccggtttattacgg
              ^^     ^^ ^^  ^           ^^          
   65285    62732     35    none      4      4
    Errors = 2
T:  attttgggggcgggacgacggatt
S:  attttgggggaggaacgacggatt
              ^  ^          
   65339    62786     22    none     19     19
    Errors = 6
T:  gggaaaaaagcgctaatcctaaattcgcttacaaaatga
S:  gggaaaaaagagctagccccaaatttgcctacaaaatga
              ^    ^^  ^     ^  ^          
   65375    62822     29    none     14     14
    Errors = 3
T:  cattttagcaatggaggggataagtatttaggcg
S:  cattttagcagcggaggggataaatatttaggcg
              ^^           ^          
   65564    63011     20    none    160    160
    Errors = 23
T:  tattggaattgttggcttgggaaatgtatgcccaaaatttccaagagctgaaagcaaaag
S:  tattggaattattggcttgggaaacgtatgccaaaaatttccaaacgctaaaagaaaaag
              ^             ^       ^           ^^   ^    ^     
T:  atgttgtcattgctaaacccaactatgacaggatcgatacgcaacgctttggatctttta
S:  atattgtcatcgctaagcccaactatgacaggattgatacgcaactcttcggatcgttta
      ^       ^     ^                 ^          ^   ^     ^    
T:  tgcaaaactccagagaagcacgcttgaatttgcaaacgattgcttctaacttgcgccctt
S:  tgcaaaattccagtggagtgcgtttgaatttgcaaacgatcgcttctcaattgcgccctt
           ^     ^ ^  ^^  ^                 ^      ^ ^          
   65600    63047     24    none     16     16
    Errors = 3
T:  ttttagaaaaattagacgctaatatcatagaagcga
S:  ttttagaaaatttagacgccaatattatagaagcga
              ^        ^     ^          
   65780    63224     26    none    156    153
    Errors = 33
T:  agaaaatgaagaatttgagatagaaggctttgaaaaggaatttaaagtccagctgttgga
S:  agaaaatgaaaactttgagataaagggttttgaaaaggattttaaagccatgctgtttga
              ^ ^         ^ ^  ^           ^       ^ ^^      ^  
T:  taggaatgggggagattcaccagtagaagacttcaaagtggattacaaagaacttttaaa
S:  taggaacggggtaga...aacagaatgcgatcttaaagttgattgcaaagagcttttaaa
          ^    ^   ^^^ ^   ^ ^^^  ^^ ^     ^    ^      ^        
T:  cctcttaaaagacaagatagatgacggcgttaaaaacttctttgcaggattttcta
S:  cctcttaaaaggcaagatagaagatggcgttgccaacttctttgccggattttcta
               ^         ^  ^      ^^^           ^          
   65870    63314     23    none     64     64
    Errors = 12
T:  tggctgaaaatattgataatcagtgtcgggcgtttcatattttcttaggagggaatgcga
S:  tggctgaaaacattgatgatcagtgtcgggcgtttcacattttcttaggcaggaatgtga
              ^      ^                   ^           ^^      ^  
T:  gcaaatcggtgctggtcaaacaag
S:  gccgttcggcgttagtcaaacaag
      ^^^    ^ ^ ^          
   65955    63399     23    none     62     62
    Errors = 10
T:  ttgaaaacgctaaagaagagcagctcaaagcttacaagcaaaagacttctaaagatgatt
S:  ttgaaaacgccaaagaaaagcagctcaaagattaccatcaaaagacttctaaaaatgatt
              ^      ^            ^    ^ ^               ^      
T:  tcacattcattctttatgagcc
S:  ttaaattcatcatttatgagcc
     ^ ^      ^^          
   65981    63425     26    none      3      3
    Errors = 3
T:  aggcacagaagcctcagacaaac
S:  aggcacagaaaaatcagacaaac
              ^^^          
   66131    63575     20    none    124    124
    Errors = 23
T:  tagagcttacaggagaagacgtttctaacaagcccgcttatttaaagcccacttgcaaaa
S:  tagagcttacgggagaagacgtttctaacacgcccgcttatttgaagcccacttgcaaaa
              ^                   ^            ^                
T:  ccggtgtggctttcggacttttagaaagcagacccaaagcaggcgggattgaaagaccct
S:  ctggggtggcttttgggcttttagaaagcagggacaaggctcaagggattgaaatgccct
     ^  ^        ^  ^              ^^^   ^  ^^^^          ^^    
T:  ctatagattttaatcctgtgttta
S:  ctataagctccaaccctgtgttta
         ^^^ ^^  ^          
   66219    63663     39    none     68     68
    Errors = 12
T:  aatacgatttgggtattgagagagaagggaaattccacactagaatcagtcgggattctt
S:  aatacgatttaggcattgagatagaggggaaattccacgctaaaatccatagggattctt
              ^  ^       ^   ^            ^   ^    ^^ ^         
T:  taaaacccaatgaataccagattttcca
S:  taaagcctaatgaatactagattttcca
        ^  ^         ^          
   66389    63833     29    none    131    131
    Errors = 24
T:  ggctttgatgggttagagatacgctacagcgataaatctctcgccaacaccaacacttta
S:  ggctttgatgagttagagatacgatacagcgacaaagccttagccaacaccaacactctg
              ^            ^        ^   ^ ^^ ^               ^ ^
T:  gacattgaagacacacaactgattttcatagcgttagaagagcatgaagaagtggatgtg
S:  gacattaaagatacgcaaatgatttccatagcgctagaagaggttgaagaagtggaagtg
          ^    ^  ^   ^      ^       ^        ^^            ^   
T:  aaggtgtgcagtatagattcacaaagcatta
S:  aaggtgtgttgcgtggattcccaaagcatta
            ^^ ^^ ^     ^          
   66445    63889     26    none     27     27
    Errors = 5
T:  tgtttaaagataaccaattaatctatgaaagcgaggcagaaaaatta
S:  tgtttaaagacggccaattgatctatgaaagcgaggtagaaaaatta
              ^^^      ^                ^          
   66582    64026     22    none    111    111
    Errors = 15
T:  ctaagaacgcgtatgcgtttgttgtgattgaagaaagcgttatggtgtttaaacgcacca
S:  ctaagaacgcttatgcgtttgtcgtgattgaaaaaagtattatggtgtttaaatgcgcca
              ^           ^         ^    ^^              ^  ^   
T:  aagatgaggggttaatgcctatctttgaaggctttgtgcctttaaaagagggctttttga
S:  aagacaaggggctaatccctatcactgaaggctttgtgccgttaaaagagggctttttga
        ^^     ^    ^      ^^               ^                   
T:  aaagttttaaa
S:  gaagttttaaa
    ^          
   66610    64054     36    none      6      6
    Errors = 2
T:  gcgttgcaatttggaatttttagaaa
S:  gcgttgcaatctggattttttagaaa
              ^    ^          
   66812    64256     25    none    166    166
    Errors = 31
T:  tttgtatgacaaaccatccgcacacgagatcttttccttgtgcaaggagctgaaaaattc
S:  tttgtatgactaccaatttccaagcgaggttttttcattgtgtaaggatttgaaaaattc
              ^ ^ ^  ^^^  ^^    ^ ^     ^     ^     ^^          
T:  catctgggacaggaagcttgtggtagcgctagtggaggctttagaggggtttaaggattg
S:  catttgggacagaaagcttgtggtagtgctagtggaggctttggagggttttaagggttt
       ^        ^             ^               ^     ^       ^  ^
T:  gaatttgtcgcttaaaatagaagacaagcgttctaacagcttgggtaatggcaccaaaaa
S:  gaatttgtctcttaagatagaagataggcattctaatagcttgggtaatggcgttcaaaa
             ^     ^        ^ ^  ^      ^               ^^^^    
T:  attgct
S:  attgct
          
   66862    64306     44    none     25     25
    Errors = 6
T:  acgctgatttagggagcgactataaaacaatcgtgatagacagca
S:  acgctgatttggggagcaaccacaaaccaatcgtaatagacagca
              ^      ^  ^ ^   ^       ^          
   66907    64351     62    none      1      1
    Errors = 1
T:  aagaaaaatataaaagagaaa
S:  aagaaaaatacaaaagagaaa
              ^          
   66970    64414     34    none      1      1
    Errors = 1
T:  atgggggtggaagcattagaa
S:  atgggggtgggagcattagaa
              ^          
   67007    64451    108    none      3      3
    Errors = 3
T:  aagcctgattttgatgaagaaaa
S:  aagcctgattccaatgaagaaaa
              ^^^          
   67141    64585     25    none     26     26
    Errors = 7
T:  gagttactaagagaggaagtgaacagcttgagtaatcatttccata
S:  gagttactaaacgaggaagtgaatagcttgaatggccatttccata
              ^^           ^       ^ ^^^          
   67167    64611     31    none      1      1
    Errors = 1
T:  gaatcatggcgagacgctagg
S:  gaatcatggcaagacgctagg
              ^          
   67240    64684     90    none     42     42
    Errors = 6
T:  tagcgaggtgctggataatttgaaaagcactttcaatgaatttgatgaagctgcgcaaga
S:  tagcgaggtgttggataacttgaaaggcactttcaatgaatttaatgaggccgcgcaaga
              ^       ^      ^                 ^    ^  ^        
T:  gc
S:  gc
      
   67360    64804     22    none     30     30
    Errors = 5
T:  ggaaaacggatacagaagaagtcaaagaggttgttaaaaaatgcagggaa
S:  ggaaaacggacacagaagaagtcaaaaaggttgttggaagatgcagggaa
              ^               ^        ^^  ^          
   67385    64829     76    none      3      3
    Errors = 2
T:  taaaagatccttacaagaagaaa
S:  taaaagatccctgcaagaagaaa
              ^ ^          
   67671    65121     26    none    210    216
    Errors = 83
T:  cgcagaaaaattgaacaccaattgcaagaagctatagaaaaattaagaagagccaaaaaa
S:  cgcagaaaaactgaaatgcaattggaaaaagccataggagaattaaaaaaagccaaaagc
              ^    ^^^      ^  ^    ^    ^ ^      ^  ^        ^^
T:  aagagaagtagcttttggggatcctttgtagagggt.gcgagagatcttcttgatatggt
S:  aat.gaagatgacgctaaagttgcttta.agagtcttgcaag.gtgcttct.g...tcgt
      ^^    ^^ ^^^^ ^^^ ^ ^    ^^    ^^ ^  ^  ^ ^^     ^ ^^^ ^  
T:  cagggagattatcccacctgctaaattgggtgct...gaagc..ttgt....gat.aag.
S:  ctcgtggatttggcctcctgctagaatagctgctacggcagccattgtagccgctgaagc
     ^^ ^^    ^^^  ^       ^ ^ ^ ^    ^^^ ^   ^^    ^^^^ ^ ^   ^
T:  .gttttaaatcttatggaagacaatatagaaaaatgggaacacaatgtaaggttattaga
S:  tgttttgaaatttatgaaagaagacacagaaaaatgcaaaaggaatgtggagctattaga
    ^     ^  ^^     ^    ^^ ^ ^         ^^  ^^^     ^^^ ^       
T:  acg
S:  acg
       
   67775    65225     22    none     78     78
    Errors = 19
T:  tgaaatctacgccactcaagccaaagcgagcgcggaacttgtagagggagcttggaagag
S:  tgaaatctactcgaatcaagccaaagcgagcgcgaatcttatgaatcaagcttgggaggg
              ^ ^ ^                   ^ ^   ^ ^^ ^^^       ^  ^ 
T:  cgttaaaaagtcgttggacttttataccgataagcacc
S:  cattaaaaagaggttgcatttttatactgataagcacc
     ^        ^^    ^ ^        ^          
   67957    65407     22    none    160    160
    Errors = 42
T:  gaatttatcaaacgcttgaactatgcgagtgaagcgatagacaacgaatacaatatcgcg
S:  gaatttatcaggcgtttgaaacaagcgagcgatgcgatagataacgaatacaactttcca
              ^^  ^     ^^ ^     ^  ^        ^           ^^ ^^ ^
T:  cccccagaaattttgaacgagagcgattttgaaagccctacgattgtttataaccctaaa
S:  actccaggcgttttattggaatacgattttgaacggcctgctatctcttatacccctaaa
    ^ ^    ^^^    ^^^^  ^^^          ^ ^   ^ ^  ^^^     ^       
T:  aaaagcgtttatgatgaacacttgaaagatttgagggaagattttagcttttctttatac
S:  aaaagcgtttttaatgagcgcttgaaggatttgagggaaaattttagcgcttctttatac
              ^ ^    ^ ^      ^            ^        ^^          
   68026    65488     20    none     47     59
    Errors = 25
T:  tgatttgaaaaaca.ga...at..taacgcttcttctaa....gct..agatcgcaccac
S:  tgatttgaaagacaagatccatcataacgccttgtctaacgatgatttagaacgcatgat
              ^   ^  ^^^  ^^      ^ ^^     ^^^^ ^ ^^   ^    ^^ ^
T:  aacctctaaagagcaagaa
S:  agcttttagagagcaagaa
     ^ ^ ^  ^          
   68254    65710     27    none    208    202
    Errors = 53
T:  tttgaaaagaatttagaggatttgatgccaggctttagaggtggaactgacactttgtct
S:  tttgaaaagagtttagaggattggatgggtgcatattcttatg..a.tgaaaacc...ct
              ^           ^    ^^^ ^^ ^ ^^^^^  ^^ ^   ^ ^^^^^^  
T:  ggcgatgaattagagcacatggcaagctttagagggcaagaatttgaaaagaatttagag
S:  aacgatgaattagatcgcatggcaatatctaaagagcaggagttggaaaagagtttagag
    ^^            ^ ^        ^^ ^  ^  ^   ^  ^  ^       ^       
T:  gatttgatgccgagttctttaggcgtgcattcttatgatgagagcttgaatttagccaaa
S:  gatttgatgccaagcgttttaggcgtgccttcttataacgaaagcttgactttagccaaa
               ^  ^^^           ^       ^ ^  ^       ^          
T:  aagaattgcgttaaaaattgtaagaaagctttaggagattttacagaa
S:  aatcgttgcgttaaaaactttaaggaagctttagaaggttttacagaa
      ^^^            ^ ^    ^         ^  ^          
   68336    65792     20    none     55     55
    Errors = 10
T:  aagaatcccccaacgatttgaacgctataaacgaagcttttaatcatttggaaacagagt
S:  aagaatcccctaacgattcaaacgctatcaatgaagcctttgataatttagaaacagagt
              ^       ^^        ^  ^     ^   ^  ^    ^          
T:  tagaacgcgctacag
S:  tagagcgcgctacag
        ^          
   68519    65975     29    none    163    163
    Errors = 36
T:  aaaatttgagccaaaaaatagcgcctattttagagcggtatgaaaatgataagcggcaaa
S:  aaaatttgagtcaaaaaatcgatcccgttttagaacggaatgaaaattatacgcaaaaag
              ^        ^ ^^  ^^       ^   ^        ^   ^  ^^^  ^
T:  aattgggttatggcgagtttttagaaaaagaaaaagagggctttatggtagatgagcaaa
S:  cgttggagtatagggagtttttagaaagccgtaaagagagctttattgtagatgaaaaaa
    ^^    ^^   ^ ^             ^^^^^      ^       ^        ^^   
T:  acccttatccggaagaagtccgctttaatgagttgcgtttagcggaatttgagagcgttt
S:  acccctatccggaagaagtcagctttaatgaatggcgttgggcggaatttgatagcgttt
        ^               ^          ^ ^     ^^           ^       
T:  tta
S:  tta
       
   68564    66020     30    none     16     16
    Errors = 4
T:  tgcctttagaggatttagataaacctgcatgcgctc
S:  tgcctttagaagatttaaataaaaccgcatgcgctc
              ^      ^     ^ ^          
   68615    66071     23    none     21     21
    Errors = 6
T:  aaaggctttagaagccacgcttaaaaatagggatttgggct
S:  aaaggctttacaagctacgcttaaagacaacgatttgggct
              ^    ^         ^ ^ ^^          
   68639    66095     20    none      1      1
    Errors = 1
T:  atgcgacagaattggaacaga
S:  atgcgacagagttggaacaga
              ^          
   68671    66127     40    none     12     12
    Errors = 3
T:  tcgcaaaaggtttcattcctaaggggtatttg
S:  tcgcaaaaggattcatccctagggggtatttg
              ^     ^    ^          
   68718    66174     46    none      7      7
    Errors = 3
T:  tttagggaatgtggcgttggtgagaga
S:  tttagggaatttagcgctggtgagaga
              ^ ^   ^          
   68798    66254     20    none     34     34
    Errors = 10
T:  cgaaaggatacttactatggaaacaattcctgcaaactcagaactgaattggga
S:  cgaaaggatattcactatggacagaatttctacagaaacagaattgaattggga
              ^ ^        ^ ^    ^  ^  ^ ^^     ^          
   68861    66317     32    none     43     43
    Errors = 7
T:  atttgtagagccgctcaatgaaaaggcgttgagcgggttagaagagcggttgaaaatagg
S:  atttgtagagtcgctcaatgaaaatgcgttgagcgatctagaagagcgattggaaatagg
              ^             ^          ^^^          ^   ^       
T:  ctt
S:  ctt
       
   68894    66350     30    none      1      1
    Errors = 1
T:  taaggactttgtcaaacgatc
S:  taaggactttatcaaacgatc
              ^          
   69016    66472     30    none     92     92
    Errors = 13
T:  tttagccaatggcgttcttttgtggtgggcaataagtcttacacgttcaaacatgttttg
S:  tttagccaattgcgttatttcatggtgggcaatgagtcttacatgttcaaacatgttttg
              ^     ^   ^^           ^         ^                
T:  aacttcaatttagagggcttatttattgattttatgcagagtttaaaagaat
S:  aatttcaatttagagagcttgttgattgatttcatgcaaagcttaaaagaat
      ^            ^    ^  ^        ^     ^  ^          
   69049    66505     34    none      3      3
    Errors = 2
T:  tgaagaaatcatcttcgctaatg
S:  tgaagaaatcgtattcgctaatg
              ^ ^          
   69097    66553     23    none     14     14
    Errors = 5
T:  tattatcttttgaatacggctaccgatgtggtgc
S:  tattatctttggaataccaccactgatgtggtgc
              ^      ^^ ^  ^          
   69166    66622     30    none     46     46
    Errors = 12
T:  ttttagacactgatgatggctcaaaacatgcgctgttgcaccttaaaatgtttttgaaaa
S:  ttttagacaccgataatggttcaaaaaaagtgctattaaatcttaatatgtttttaaaaa
              ^   ^    ^      ^ ^ ^   ^  ^^ ^     ^        ^    
T:  aactgg
S:  aactgg
          
   69315    66774     37    none    119    122
    Errors = 24
T:  ttaaaatgtt...ttctcatgaagtttatttggagggttgcacccttgaattaagaaaga
S:  ttaaaatgttgttttctcataaagtttttttggagggttgcaccaatgagttaagaagga
              ^^^       ^      ^                ^^   ^       ^  
T:  tttgcgatgattttgaaaaaaatgccatgcaagatgatttagggcagaaactcaggagtg
S:  tttgcgactctttcgtagaaggggccatgcaagatgatttggggcagaaactcaaaagtg
           ^^^   ^ ^ ^  ^^^                 ^             ^^    
T:  atgtgctagaggacatgctaaa
S:  aggcgctagagaacatgctaaa
     ^ ^       ^          
   69445    66907     53    none     93     96
    Errors = 28
T:  aaaatttagaagatgacacccaataccaaagaagaataattgacgagcaaattgaagaag
S:  aaaatttagagcaggaaactcaatacgaaatgagaaaaatcaacgagcaacttgaagaag
              ^^ ^  ^  ^      ^   ^^    ^   ^^        ^         
T:  ccaaatctttgatgaggcaaattgatatg.aatttc..catccatcaagcgagatc
S:  ccaagcgtttggagaagcaagttgatatgcaagatcgccactcacaaagcgagatc
        ^^^    ^^  ^    ^        ^  ^^  ^^  ^^  ^^          
   69573    67029     59    none     75     69
    Errors = 28
T:  agagaagctagtaaaagatatgatgagtatcttaaatctaaggataaaaatgattgatgt
S:  agagaagctaagaggcgctatggtgaatatcttaa......ggataaaaatgattgaaat
              ^^ ^^^ ^    ^   ^        ^^^^^^                ^^ 
T:  gaatggtttattaaaagaactggatgatgccttag
S:  aagcgaatggttgcaaaaactagacgatgccttag
    ^ ^^ ^^ ^^  ^^  ^    ^  ^          
   69633    67089     62    none      1      1
    Errors = 1
T:  agccgatcatctcaccaatag
S:  agccgatcatttcaccaatag
              ^          
   69723    67179     24    none     28     28
    Errors = 3
T:  cagacgcgccaaagttcaatgaagagggcgcttacccacaatttttaa
S:  cagacgcgccgaagttcaatgaagagggtgcttaccctcaatttttaa
              ^                 ^        ^          
   69786    67242     68    none     39     39
    Errors = 9
T:  tggtttattggaaattaaaggcaagaatggcgctagcatggaattttgcttgcctaaag
S:  tggtttattgcaagttaggggcaaaaatggtgctaacatggaatttttattgcctaaag
              ^  ^   ^^     ^     ^    ^           ^^          
> H_pylori26695_Bslice.fasta  Other matches
   23406     5518     34    none      -      -
    5425    23722     24    none      -      -
   52232    53119     60    none      -      -