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/*****************************************************************************
/
/ SPACE (SPArse Cholesky Elimination) Library: ddcreate.c
/
/ author J"urgen Schulze, University of Paderborn
/ created 00nov28
/
/ This file contains functions dealing with construction/coarsening
/ of a domain decomposition
/
******************************************************************************
Data type: struct domdec
graph_t *G; pointer to graph object
int ndom; number of domains
int domwght; total weight of domains
int *vtype; type of node (see comment below)
int *color; color of node (GRAY, BLACK, or WHITE)
int cwght[3]; weights of GRAY, BLACK, WHITE partitions
int *map; maps nodes to next coarser domain decomp.
struct domdec *prev; pointer to previous finer domain decomp.
struct domdec *next; pointer to next coarser domain decomp.
Comments:
o Structure holds the domain decompositions constructed by the
coarsening process; it also holds the colorings of the domain decomp.
computed by the refinement process
o vtype[v]: represents the status of a node in the domain decomposition
0, iff status of v is unknown
1, iff v is a domain vertex
2, iff v is a multisector vertex
3, iff multisec v is eliminated and now forms a domain
4, iff multisec v is absorbed by another multisec/domain
Methods in lib/ddcreate.c:
- dd = newDomainDecomposition(int nvtx, int nedges);
o Initial: ndom = domwght = 0,
cwght[GRAY] = cwght[BLACK] = cwght[WHITE] = 0,
and prev = next = NULL
- void freeDomainDecomposition(domdec_t *dd);
- void printDomainDecomposition(domdec_t *dd);
- void checkDomainDecomposition(domdec_t *dd);
- void buildInitialDomains(graph_t *G, int *vtxlist, int *vtype, int *rep);
o determines initial domains according to the order of nodes in vtxlist;
furthermore, it sets rep[u] = v for all multisecs u that are adjacent
to only one domain v
o on start vtype[u] = 0 for all 0 <= u < nvtx, on return
vtype[u] = 1, iff u belongs to a domain (rep[u]=u => u is seed of domain)
vtype[u] = 2, iff u belongs to a multisec (rep[u]=u => u is seed)
- void mergeMultisecs(graph_t *G, int *vtype, int *rep);
o merges all adjacent multisecs that do not share a common domain
o on return vtype[w] = 4, iff multisec w belongs to multisec cluster
u = rep[w]
- dd = initialDomainDecomposition(graph_t *G, int *map, int *vtype, int *rep);
o allocates memory for the initial domain decomposition of G by calling
newDomainDecomposition and creates the domain decomposition according
to the vectors vtype and rep; the map vector maps vertices of G onto
vertices of dd
- dd = constructDomainDecomposition(graph_t *G, int *map);
o constructs an initial domain decomposition for the graph G by calling
the functions (a) buildInitialDomains
(b) mergeMultisecs
(c) initialDomainDecomposition
vextor map identifies vertices of G in the domain decomposition
- void computePriorities(domdec_t *dd, int *msvtxlist, int *key, int scoretype);
o computes for each multisec u in msvtxlist its priority key[u] according
to the node selection strategy scoretype
- void eliminateMultisecs(domdec_t *dd, int *msvtxlist, int *rep);
o eliminates multisecs according to their order in msvtxlist; furthermore,
it sets rep[u] = v for all multisecs u that are adjacent to only one
newly formed domain v
o on return
dd->vtype[u] = 1, iff u is a domain (rep[u] = u)
dd->vtype[u] = 2, iff u is an uneliminated multisec (rep[u] = u)
dd->vtype[u] = 3, iff u is an eliminated multisec (rep[u] = u)
dd->vtype[u] = 4, iff multisec u is absorbed by new domain v = rep[u];
- void findIndMultisecs(domdec_t *dd, int *msvtxlist, int *rep);
o searches all unelim./unabsorbed multisecs in msnvtxlist for
indistinguishable multisecs; sets dd->vtype[u] = 4 and rep[u] = v, iff
u, v are indistinguishable and v is the representative of u
- dd2 = coarserDomainDecomposition(domdec_t* dd1, int *rep);
o allocates memory for the coarser domain decomposition by calling
newDomainDecomposition and creates the domain decomposition according
to the vectors dd1->vtype and rep; vector dd1->map identifies the
vertices of dd1 in dd2
- void shrinkDomainDecomposition(domdec_t *dd, int scoretype);
o shrinks dd according to a chosen node selection strategy by calling
the functions (a) computePriorities
(b) eliminateMultisecs
(c) findIndMultisecs
(d) coarserDomainDecomposition
the coarser domain decomposition is appended to dd via prev/next pointers
******************************************************************************/
#include <space.h>
/*****************************************************************************
******************************************************************************/
domdec_t*
newDomainDecomposition(PORD_INT nvtx, PORD_INT nedges)
{ domdec_t *dd;
mymalloc(dd, 1, domdec_t);
mymalloc(dd->vtype, nvtx, PORD_INT);
mymalloc(dd->color, nvtx, PORD_INT);
mymalloc(dd->map, nvtx, PORD_INT);
dd->G = newGraph(nvtx, nedges);
dd->ndom = dd->domwght = 0;
dd->cwght[GRAY] = dd->cwght[BLACK] = dd->cwght[WHITE] = 0;
dd->prev = dd->next = NULL;
return(dd);
}
/*****************************************************************************
******************************************************************************/
void
freeDomainDecomposition(domdec_t *dd)
{
freeGraph(dd->G);
free(dd->vtype);
free(dd->color);
free(dd->map);
free(dd);
}
/*****************************************************************************
******************************************************************************/
void
printDomainDecomposition(domdec_t *dd)
{ graph_t *G;
PORD_INT count, u, v, i, istart, istop;
G = dd->G;
printf("\n#nodes %d (#domains %d, weight %d), #edges %d, totvwght %d\n",
G->nvtx, dd->ndom, dd->domwght, G->nedges >> 1, G->totvwght);
printf("partition weights: S %d, B %d, W %d\n", dd->cwght[GRAY],
dd->cwght[BLACK], dd->cwght[WHITE]);
for (u = 0; u < G->nvtx; u++)
{ count = 0;
printf("--- adjacency list of node %d (vtype %d, color %d, map %d\n",
u, dd->vtype[u], dd->color[u], dd->map[u]);
istart = G->xadj[u];
istop = G->xadj[u+1];
for (i = istart; i < istop; i++)
{ v = G->adjncy[i];
printf("%5d (vtype %2d, color %2d)", v, dd->vtype[v], dd->color[v]);
if ((++count % 3) == 0)
printf("\n");
}
if ((count % 3) != 0)
printf("\n");
}
}
/*****************************************************************************
******************************************************************************/
void
checkDomainDecomposition(domdec_t *dd)
{ PORD_INT *xadj, *adjncy, *vwght, *vtype;
PORD_INT err, nvtx, ndom, domwght, dom, multi, u, v, i, istart, istop;
nvtx = dd->G->nvtx;
xadj = dd->G->xadj;
adjncy = dd->G->adjncy;
vwght = dd->G->vwght;
vtype = dd->vtype;
err = FALSE;
printf("checking domain decomposition (#nodes %d, #edges %d)\n",
dd->G->nvtx, dd->G->nedges >> 1);
ndom = domwght = 0;
for (u = 0; u < nvtx; u++)
{ /* check node type */
if ((vtype[u] != 1) && (vtype[u] != 2))
{ printf("ERROR: node %d is neither DOMAIN nor MULTISEC\n", u);
err = TRUE;
}
/* count domains and sum up their weight */
if (vtype[u] == 1)
{ ndom++;
domwght += vwght[u];
}
/* check number of neighboring domains and multisecs */
dom = multi = 0;
istart = xadj[u];
istop = xadj[u+1];
for (i = istart; i < istop; i++)
{ v = adjncy[i];
if (vtype[v] == 1) dom++;
if (vtype[v] == 2) multi++;
}
if ((vtype[u] == 1) && (dom > 0))
{ printf("ERROR: domain %d is adjacent to other domain\n", u);
err = TRUE;
}
if ((vtype[u] == 2) && (dom < 2))
{ printf("ERROR: less than 2 domains adjacent to multisec node %d\n", u);
err = TRUE;
}
if ((vtype[u] == 2) && (multi > 0))
{ printf("ERROR: multisec %d is adjacent to other multisec nodes\n", u);
err = TRUE;
}
}
/* check number and weight of domains */
if ((ndom != dd->ndom) || (domwght != dd->domwght))
{ printf("ERROR: number/size (%d/%d) of domains does not match with those in"
" domain decomp. (%d/%d)\n", ndom, domwght, dd->ndom, dd->domwght);
err = TRUE;
}
if (err) quit();
}
/*****************************************************************************
******************************************************************************/
void
buildInitialDomains(graph_t *G, PORD_INT *vtxlist, PORD_INT *vtype, PORD_INT *rep)
{ PORD_INT *xadj, *adjncy;
PORD_INT nvtx, u, v, w, i, j, jstart, jstop;
xadj = G->xadj;
adjncy = G->adjncy;
nvtx = G->nvtx;
/* --------------------------------------------------------------------
determine initial domains according to the order of nodes in vtxlist
-------------------------------------------------------------------- */
for (i = 0; i < nvtx; i++)
{ u = vtxlist[i];
if (vtype[u] == 0)
{ vtype[u] = 1;
jstart = xadj[u];
jstop = xadj[u+1];
for (j = jstart; j < jstop; j++)
{ v = adjncy[j];
vtype[v] = 2;
}
}
}
/* ------------------------------------------------------------
eliminate all multisecs that are adjacent to only one domain
------------------------------------------------------------ */
for (i = 0; i < nvtx; i++)
{ u = vtxlist[i];
if (vtype[u] == 2)
{ v = -1;
jstart = xadj[u];
jstop = xadj[u+1];
for (j = jstart; j < jstop; j++)
{ w = adjncy[j];
if (vtype[w] == 1)
{ if (v == -1)
v = rep[w]; /* u adjacent to domain v = rep[w] */
else if (v != rep[w])
{ v = -1; /* u adjacent to another domain */
break;
}
}
}
if (v != -1) /* u absorbed by domain v */
{ vtype[u] = 1;
rep[u] = v;
}
}
}
}
/*****************************************************************************
******************************************************************************/
void
mergeMultisecs(graph_t *G, PORD_INT *vtype, PORD_INT *rep)
{ PORD_INT *xadj, *adjncy, *tmp, *queue;
PORD_INT nvtx, qhead, qtail, flag, keepon, u, v, w, x;
PORD_INT i, istart, istop, j, jstart, jstop;
nvtx = G->nvtx;
xadj = G->xadj;
adjncy = G->adjncy;
/* ------------------------
allocate working storage
------------------------ */
mymalloc(tmp, nvtx, PORD_INT);
mymalloc(queue, nvtx, PORD_INT);
for (u = 0; u < nvtx; u++)
tmp[u] = -1;
/* -------------------------------------------------------
merge all adjacent multisecs that do not share a domain
------------------------------------------------------- */
flag = 1;
for (u = 0; u < nvtx; u++)
if (vtype[u] == 2)
{ qhead = 0; qtail = 1;
queue[0] = u;
vtype[u] = -2;
/* multisec u is the seed of a new cluster, mark all adj. domains */
istart = xadj[u];
istop = xadj[u+1];
for (i = istart; i < istop; i++)
{ v = adjncy[i];
if (vtype[v] == 1)
tmp[rep[v]] = flag;
}
/* and now build the cluster */
while (qhead != qtail)
{ v = queue[qhead++];
istart = xadj[v];
istop = xadj[v+1];
for (i = istart; i < istop; i++)
{ keepon = TRUE;
w = adjncy[i];
if (vtype[w] == 2)
{ jstart = xadj[w];
jstop = xadj[w+1];
for (j = jstart; j < jstop; j++)
{ x = adjncy[j];
if ((vtype[x] == 1) && (tmp[rep[x]] == flag))
{ keepon = FALSE;
break;
}
}
if (keepon)
/* multisecs v and w have no domain in common; mark */
/* all domains adjacent to w and put w in cluster u */
{ for (j = jstart; j < jstop; j++)
{ x = adjncy[j];
if (vtype[x] == 1) tmp[rep[x]] = flag;
}
queue[qtail++] = w;
rep[w] = u;
vtype[w] = -2;
}
}
}
}
/* clear tmp vector for next round */
flag++;
}
/* ------------------------------------
reset vtype and free working storage
------------------------------------ */
for (u = 0; u < nvtx; u++)
if (vtype[u] == -2)
vtype[u] = 2;
free(tmp); free(queue);
}
/*****************************************************************************
******************************************************************************/
domdec_t*
initialDomainDecomposition(graph_t *G, PORD_INT *map, PORD_INT *vtype, PORD_INT *rep)
{ domdec_t *dd;
PORD_INT *xadj, *adjncy, *vwght, *xadjdd, *adjncydd, *vwghtdd, *vtypedd;
PORD_INT *tmp, *bin, nvtx, nedges, nvtxdd, nedgesdd, ndom, domwght, flag;
PORD_INT i, j, jstart, jstop, u, v, w;
nvtx = G->nvtx;
nedges = G->nedges;
xadj = G->xadj;
adjncy = G->adjncy;
vwght = G->vwght;
/* ------------------------
allocate working storage
------------------------ */
mymalloc(tmp, nvtx, PORD_INT);
mymalloc(bin, nvtx, PORD_INT);
for (u = 0; u < nvtx; u++)
{ tmp[u] = -1;
bin[u] = -1;
}
/* -------------------------------------------------------------
allocate memory for the dd using upper bounds nvtx and nedges
------------------------------------------------------------- */
dd = newDomainDecomposition(nvtx, nedges);
xadjdd = dd->G->xadj;
adjncydd = dd->G->adjncy;
vwghtdd = dd->G->vwght;
vtypedd = dd->vtype;
/* -------------------------------------------------------
put all nodes u belonging to representative v in bin[v]
------------------------------------------------------- */
for (u = 0; u < nvtx; u++)
{ v = rep[u];
if (u != v)
{ bin[u] = bin[v];
bin[v] = u;
}
}
/* ----------------------------------------------
and now build the initial domain decomposition
---------------------------------------------- */
flag = 1;
nedgesdd = nvtxdd = 0;
ndom = domwght = 0;
for (u = 0; u < nvtx; u++)
if (rep[u] == u)
{ xadjdd[nvtxdd] = nedgesdd;
vtypedd[nvtxdd] = vtype[u];
vwghtdd[nvtxdd] = 0;
tmp[u] = flag;
/* find all cluster that are adjacent to u in dom. dec. */
v = u;
do
{ map[v] = nvtxdd;
vwghtdd[nvtxdd] += vwght[v];
jstart = xadj[v];
jstop = xadj[v+1];
for (j = jstart; j < jstop; j++)
{ w = adjncy[j];
if ((vtype[w] != vtype[u]) && (tmp[rep[w]] != flag))
{ tmp[rep[w]] = flag;
adjncydd[nedgesdd++] = rep[w];
}
}
v = bin[v];
} while (v != -1);
if (vtypedd[nvtxdd] == 1)
{ ndom++;
domwght += vwghtdd[nvtxdd];
}
nvtxdd++;
flag++;
}
/* --------------------------------------------
finalize the new domain decomposition object
-------------------------------------------- */
xadjdd[nvtxdd] = nedgesdd;
dd->G->nvtx = nvtxdd;
dd->G->nedges = nedgesdd;
dd->G->type = WEIGHTED;
dd->G->totvwght = G->totvwght;
for (i = 0; i < nedgesdd; i++)
adjncydd[i] = map[adjncydd[i]];
for (u = 0; u < nvtxdd; u++)
dd->color[u] = dd->map[u] = -1;
dd->ndom = ndom;
dd->domwght = domwght;
/* -------------------------------
free working storage and return
------------------------------- */
free(tmp); free(bin);
return(dd);
}
/*****************************************************************************
******************************************************************************/
domdec_t*
constructDomainDecomposition(graph_t *G, PORD_INT *map)
{ domdec_t *dd;
PORD_INT *xadj, *adjncy, *vwght, *vtxlist, *vtype, *key, *rep;
PORD_INT nvtx, deg, u, i, istart, istop;
nvtx = G->nvtx;
xadj = G->xadj;
adjncy = G->adjncy;
vwght = G->vwght;
/* ---------------------------------------------------------
sort the vertices in G in ascending order of their degree
--------------------------------------------------------- */
mymalloc(vtxlist, nvtx, PORD_INT);
mymalloc(key, nvtx, PORD_INT);
for (u = 0; u < nvtx; u++)
{ vtxlist[u] = u;
istart = xadj[u];
istop = xadj[u+1];
switch(G->type)
{ case UNWEIGHTED:
deg = istop - istart;
break;
case WEIGHTED:
deg = 0;
for (i = istart; i < istop; i++)
deg += vwght[adjncy[i]];
break;
default:
fprintf(stderr, "\nError in function constructDomainDecomposition\n"
" unrecognized graph type %d\n", G->type);
quit();
}
key[u] = deg;
}
distributionCounting(nvtx, vtxlist, key);
free(key);
/* -------------------------------------------------------------
build initial domains and cluster multisecs that do not share
a common domain
------------------------------------------------------------- */
mymalloc(vtype, nvtx, PORD_INT);
mymalloc(rep, nvtx, PORD_INT);
for (u = 0; u < nvtx; u++)
{ vtype[u] = 0;
rep[u] = u;
}
buildInitialDomains(G, vtxlist, vtype, rep);
mergeMultisecs(G, vtype, rep);
free(vtxlist);
/* --------------------------------------------------
finally, build the domain decomposition and return
-------------------------------------------------- */
dd = initialDomainDecomposition(G, map, vtype, rep);
free(vtype); free(rep);
return(dd);
}
/*****************************************************************************
******************************************************************************/
void
computePriorities(domdec_t *dd, PORD_INT *msvtxlist, PORD_INT *key, PORD_INT scoretype)
{ PORD_INT *xadj, *adjncy, *vwght, *marker;
PORD_INT nvtx, nlist, k, weight, deg, u, v, w;
PORD_INT i, istart, istop, j, jstart, jstop;
nvtx = dd->G->nvtx;
xadj = dd->G->xadj;
adjncy = dd->G->adjncy;
vwght = dd->G->vwght;
marker = dd->map;
nlist = nvtx - dd->ndom;
switch(scoretype)
{ case QMRDV: /* maximal relative decrease of variables in quotient graph */
for (k = 0; k < nlist; k++)
{ u = msvtxlist[k];
weight = vwght[u];
istart = xadj[u];
istop = xadj[u+1];
for (i = istart; i < istop; i++)
weight += vwght[adjncy[i]];
key[u] = weight / vwght[u];
}
break;
case QMD: /* ----------------------- minimum degree in quotient graph */
for (k = 0; k < nlist; k++)
{ u = msvtxlist[k];
marker[u] = -1;
}
for (k = 0; k < nlist; k++)
{ u = msvtxlist[k];
marker[u] = u;
deg = 0;
istart = xadj[u];
istop = xadj[u+1];
for (i = istart; i < istop; i++)
{ v = adjncy[i];
jstart = xadj[v];
jstop = xadj[v+1];
for (j = jstart; j < jstop; j++)
{ w = adjncy[j];
if (marker[w] != u)
{ marker[w] = u;
deg += vwght[w];
}
}
}
key[u] = deg;
}
break;
case QRAND: /* ------------------------------------------------- random */
for (k = 0; k < nlist; k++)
{ u = msvtxlist[k];
key[u] = myrandom(nvtx);
}
break;
default:
fprintf(stderr, "\nError in internal function computePriorities\n"
" unrecognized node selection strategy %d\n", scoretype);
quit();
}
}
/*****************************************************************************
******************************************************************************/
void
eliminateMultisecs(domdec_t *dd, PORD_INT *msvtxlist, PORD_INT *rep)
{ PORD_INT *xadj, *adjncy, *vtype;
PORD_INT nvtx, nlist, keepon, u, v, w, k, i, istart, istop;
nvtx = dd->G->nvtx;
xadj = dd->G->xadj;
adjncy = dd->G->adjncy;
vtype = dd->vtype;
nlist = nvtx - dd->ndom;
/* -------------------------------------------------------
eliminate multisecs according to the order in msvtxlist
------------------------------------------------------- */
for (k = 0; k < nlist; k++)
{ u = msvtxlist[k];
istart = xadj[u];
istop = xadj[u+1];
keepon = TRUE;
for (i = istart; i < istop; i++)
{ v = adjncy[i];
if (rep[v] != v) /* domain already absorbed by an eliminated */
{ keepon = FALSE; /* multisec => multisec u cannot be deleted */
break;
}
}
if (keepon)
{ vtype[u] = 3;
for (i = istart; i < istop; i++)
{ v = adjncy[i];
rep[v] = u;
}
}
}
/* ------------------------------------------------------------
eliminate all multisecs that are adjacent to only one domain
------------------------------------------------------------ */
for (k = 0; k < nlist; k++)
{ u = msvtxlist[k];
if (vtype[u] == 2)
{ v = -1;
istart = xadj[u];
istop = xadj[u+1];
for (i = istart; i < istop; i++)
{ w = adjncy[i];
if (v == -1)
v = rep[w]; /* u adjacent to domain v = rep[w] */
else if (v != rep[w])
{ v = -1; /* u adjacent to another domain */
break;
}
}
if (v != -1) /* u absorbed by domain v */
{ vtype[u] = 4;
rep[u] = v;
}
}
}
}
/*****************************************************************************
******************************************************************************/
void
findIndMultisecs(domdec_t *dd, PORD_INT *msvtxlist, PORD_INT *rep)
{ PORD_INT *xadj, *adjncy, *vtype, *tmp, *bin, *checksum, *next, *key;
PORD_INT nvtx, nlist, flag, keepon, deg, chk, ulast, u, v, k, i, istart, istop;
nvtx = dd->G->nvtx;
xadj = dd->G->xadj;
adjncy = dd->G->adjncy;
vtype = dd->vtype;
nlist = nvtx - dd->ndom;
checksum = dd->map;
/* ------------------------
allocate working storage
------------------------ */
mymalloc(tmp, nvtx, PORD_INT);
mymalloc(bin, nvtx, PORD_INT);
mymalloc(next, nvtx, PORD_INT);
mymalloc(key, nvtx, PORD_INT);
for (u = 0; u < nvtx; u++)
{ tmp[u] = -1;
bin[u] = -1;
}
/* -------------------------------------------------------------------
compute checksums for all unelim./unabsorbed multisecs in msvtxlist
------------------------------------------------------------------- */
flag = 1;
for (k = 0; k < nlist; k++)
{ u = msvtxlist[k];
if (vtype[u] == 2)
{ deg = chk = 0;
istart = xadj[u];
istop = xadj[u+1];
for (i = istart; i < istop; i++)
{ v = adjncy[i];
if (tmp[rep[v]] != flag)
{ tmp[rep[v]] = flag;
chk += rep[v];
deg++;
}
}
chk = chk % nvtx;
checksum[u] = chk;
key[u] = deg;
next[u] = bin[chk];
bin[chk] = u;
flag++;
}
}
/* ---------------------------------
merge indistinguishable multisecs
--------------------------------- */
for (k = 0; k < nlist; k++)
{ u = msvtxlist[k];
if (vtype[u] == 2)
{ chk = checksum[u];
v = bin[chk]; /* examine all multisecs in bin[hash] */
bin[chk] = -1; /* do this only once */
while (v != -1)
{ istart = xadj[v];
istop = xadj[v+1];
for (i = istart; i < istop; i++)
tmp[rep[adjncy[i]]] = flag;
ulast = v; /* v is principal and u is a potiential */
u = next[v]; /* nonprincipal variable */
while (u != -1)
{ keepon = TRUE;
if (key[u] != key[v])
keepon = FALSE;
if (keepon)
{ istart = xadj[u];
istop = xadj[u+1];
for (i = istart; i < istop; i++)
if (tmp[rep[adjncy[i]]] != flag)
{ keepon = FALSE;
break;
}
}
if (keepon) /* found it! mark u as nonprincipal */
{ rep[u] = v;
/* printf(" >> mapping %d onto %d\n", u, v); */
vtype[u] = 4;
u = next[u];
next[ulast] = u; /* remove u from bin */
}
else /* failed */
{ ulast = u;
u = next[u];
}
}
v = next[v]; /* no more variables can be absorbed by v */
flag++; /* clear tmp vector for next round */
}
}
}
/* --------------------
free working storage
-------------------- */
free(tmp); free(bin);
free(next); free(key);
}
/*****************************************************************************
******************************************************************************/
domdec_t*
coarserDomainDecomposition(domdec_t* dd1, PORD_INT *rep)
{ domdec_t *dd2;
PORD_INT *xadjdd1, *adjncydd1, *vwghtdd1, *vtypedd1, *mapdd1;
PORD_INT *xadjdd2, *adjncydd2, *vwghtdd2, *vtypedd2;
PORD_INT *tmp, *bin, nvtxdd1, nedgesdd1, nvtxdd2, nedgesdd2;
PORD_INT ndom, domwght, flag, u, v, w, i, istart, istop;
nvtxdd1 = dd1->G->nvtx;
nedgesdd1 = dd1->G->nedges;
xadjdd1 = dd1->G->xadj;
adjncydd1 = dd1->G->adjncy;
vwghtdd1 = dd1->G->vwght;
vtypedd1 = dd1->vtype;
mapdd1 = dd1->map;
/* ------------------------
allocate working storage
------------------------ */
mymalloc(tmp, nvtxdd1, PORD_INT);
mymalloc(bin, nvtxdd1, PORD_INT);
for (u = 0; u < nvtxdd1; u++)
{ tmp[u] = -1;
bin[u] = -1;
}
/* ------------------------------------------------------------
allocate memory using the upper bounds nvtxdd1 and nedgesdd1
------------------------------------------------------------ */
dd2 = newDomainDecomposition(nvtxdd1, nedgesdd1);
xadjdd2 = dd2->G->xadj;
adjncydd2 = dd2->G->adjncy;
vwghtdd2 = dd2->G->vwght;
vtypedd2 = dd2->vtype;
/* -------------------------------------------------------
put all nodes u belonging to representative v in bin[v]
------------------------------------------------------- */
for (u = 0; u < nvtxdd1; u++)
{ v = rep[u];
if (u != v)
{ bin[u] = bin[v];
bin[v] = u;
}
}
/* ----------------------------------------------
and now build the coarser domain decomposition
---------------------------------------------- */
flag = 1;
nvtxdd2 = nedgesdd2 = 0;
ndom = domwght = 0;
for (u = 0; u < nvtxdd1; u++)
if (rep[u] == u)
{ xadjdd2[nvtxdd2] = nedgesdd2;
vwghtdd2[nvtxdd2] = 0;
vtypedd2[nvtxdd2] = vtypedd1[u];
if (vtypedd2[nvtxdd2] == 3)
vtypedd2[nvtxdd2] = 1;
tmp[u] = flag;
/* find all cluster that are adjacent to u in dom. dec. */
v = u;
do
{ mapdd1[v] = nvtxdd2;
vwghtdd2[nvtxdd2] += vwghtdd1[v];
if ((vtypedd1[v] == 1) || (vtypedd1[v] == 2))
{ istart = xadjdd1[v];
istop = xadjdd1[v+1];
for (i = istart; i < istop; i++)
{ w = adjncydd1[i];
if (tmp[rep[w]] != flag)
{ tmp[rep[w]] = flag;
adjncydd2[nedgesdd2++] = rep[w];
}
}
}
v = bin[v];
} while (v != -1);
if (vtypedd2[nvtxdd2] == 1)
{ ndom++;
domwght += vwghtdd2[nvtxdd2];
}
nvtxdd2++;
flag++;
}
/* --------------------------------------------
finalize the new domain decomposition object
-------------------------------------------- */
xadjdd2[nvtxdd2] = nedgesdd2;
dd2->G->nvtx = nvtxdd2;
dd2->G->nedges = nedgesdd2;
dd2->G->type = WEIGHTED;
dd2->G->totvwght = dd1->G->totvwght;
for (i = 0; i < nedgesdd2; i++)
adjncydd2[i] = mapdd1[adjncydd2[i]];
for (u = 0; u < nvtxdd2; u++)
dd2->color[u] = dd2->map[u] = -1;
dd2->ndom = ndom;
dd2->domwght = domwght;
/* --------------------------
set back node types in dd1
-------------------------- */
for (u = 0; u < nvtxdd1; u++)
if ((vtypedd1[u] == 3) || (vtypedd1[u] == 4))
vtypedd1[u] = 2;
/* -------------------------------
free working storage and return
------------------------------- */
free(tmp); free(bin);
return(dd2);
}
/*****************************************************************************
******************************************************************************/
void
shrinkDomainDecomposition(domdec_t* dd1, PORD_INT scoretype)
{ domdec_t *dd2;
PORD_INT *msvtxlist, *rep, *key;
PORD_INT nvtxdd1, nlist, u;
nvtxdd1 = dd1->G->nvtx;
mymalloc(msvtxlist, nvtxdd1, PORD_INT);
mymalloc(rep, nvtxdd1, PORD_INT);
mymalloc(key, nvtxdd1, PORD_INT);
/* ---------------
initializations
--------------- */
nlist = 0;
for (u = 0; u < nvtxdd1; u++)
{ if (dd1->vtype[u] == 2)
msvtxlist[nlist++] = u;
rep[u] = u;
}
/* -------------------------------------
compute priorities and sort multisecs
------------------------------------- */
computePriorities(dd1, msvtxlist, key, scoretype);
distributionCounting(nlist, msvtxlist, key);
/* ----------------------------------------------------------
eliminate multisecs and build coarser domain decomposition
---------------------------------------------------------- */
eliminateMultisecs(dd1, msvtxlist, rep);
findIndMultisecs(dd1, msvtxlist, rep);
dd2 = coarserDomainDecomposition(dd1, rep);
/* -----------------------------------
append coarser domain decomposition
----------------------------------- */
dd1->next = dd2;
dd2->prev = dd1;
free(msvtxlist);
free(rep);
free(key);
}
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