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/*
* Copyright (c) 2013, 2014, Oracle and/or its affiliates. All rights reserved.
*
* This program is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License as
* published by the Free Software Foundation; version 2 of the
* License.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA
* 02110-1301 USA
*/
#ifdef _WIN32
#define HAVE_ROUND
#endif
#include "python_copy_data_source.h"
#include "copytable.h"
#include "base/log.h"
#include "base/string_utilities.h"
#include "base/sqlstring.h"
#include "converter.h"
#include <boost/algorithm/string.hpp>
DEFAULT_LOG_DOMAIN("copytable");
PythonCopyDataSource::PythonCopyDataSource(const std::string &connstring,
const std::string &password)
: _password(password), _connection(NULL), _cursor(NULL), initialized(false)
{
// connstring comes as "pythonmodule://connection_parameters"
std::vector<std::string> conn_parts = base::split(connstring, "://", 1);
if (conn_parts.size() != 2)
std::logic_error(base::strfmt("Wrong format for the connection string: '%s'", connstring.c_str()));
_python_module = conn_parts[0];
_connstring = conn_parts[1];
_get_field_lengths_from_target = true;
#if defined(WIN32)
char wbcopytablepath[2048];
size_t pathsize = GetModuleFileName(NULL, wbcopytablepath, 2048);
if (!pathsize)
throw std::runtime_error("Could not get the full path to wbcopytables.exe");
std::string basepath(wbcopytablepath, pathsize);
_putenv(base::strfmt("PYTHONPATH=%s\\python;%s\\python\\DLLs;%s\\python\\lib",
basepath.c_str(), basepath.c_str(), basepath.c_str()).c_str());
_putenv(base::strfmt("PYTHONHOME=%s\\python", basepath.c_str()).c_str());
#endif
}
PythonCopyDataSource::~PythonCopyDataSource()
{
PyGILState_STATE state = PyGILState_Ensure();
Py_XDECREF(_cursor);
Py_XDECREF(_connection);
PyGILState_Release(state);
}
bool PythonCopyDataSource::pystring_to_string(PyObject *strobject, std::string &ret_string, bool convert=false)
{
if (strobject == Py_None)
{
ret_string = "";
return true;
}
if (PyUnicode_Check(strobject))
{
PyObject *ref = PyUnicode_AsUTF8String(strobject);
if (ref)
{
char *s;
Py_ssize_t len;
PyString_AsStringAndSize(ref, &s, &len);
if (s)
ret_string = std::string(s, len);
else
ret_string = "";
Py_DECREF(ref);
return true;
}
return false;
}
if (PyString_Check(strobject))
{
char *s;
Py_ssize_t len;
PyString_AsStringAndSize(strobject, &s, &len);
if (s)
ret_string = std::string(s, len);
else
ret_string = "";
return true;
}
if (convert)
{
PyObject *str = PyObject_Str(strobject);
if (str)
{
bool ret = pystring_to_string(str, ret_string, false);
Py_DECREF(str);
return ret;
}
}
return false;
}
void PythonCopyDataSource::_init() // This has to be executed from the same thread that copies the data
{
if (initialized)
return;
PyGILState_STATE state = PyGILState_Ensure();
PyObject *pDBModule = PyImport_ImportModule(_python_module.c_str());
if (!pDBModule || pDBModule == Py_None)
{
if (PyErr_Occurred())
PyErr_Print();
PyGILState_Release(state);
throw ConnectionError("Could not load Python module", _python_module.c_str());
}
std::string full_connection_string(_connstring);
base::replace(full_connection_string, "%password%", _password);
PyObject *pAstModule = PyImport_ImportModule("ast");
PyObject *pLiteralEvalFunction = PyObject_GetAttrString(pAstModule, "literal_eval");
PyObject *pLiteralEvalArgs = Py_BuildValue("(s)", full_connection_string.c_str());
PyObject *params = PyObject_CallObject(pLiteralEvalFunction, pLiteralEvalArgs);
PyObject *pConnectFunction = PyObject_GetAttrString(pDBModule, "connect");
if (PyErr_Occurred()) // Could not convert to a python literal using ast.literal_eval(full_connection_string),
{ // use the connection string as a python string arg to connect()
Py_XDECREF(params);
params = pLiteralEvalArgs;
Py_INCREF(pLiteralEvalArgs);
PyErr_Clear();
}
if (pConnectFunction && PyCallable_Check(pConnectFunction))
{
if (PyUnicode_Check(params) || PyString_Check(params))
{
PyObject *connection_arg = PyTuple_Pack(1, params);
_connection = PyObject_CallObject(pConnectFunction, connection_arg);
Py_DECREF(connection_arg);
}
else if (PyDict_Check(params))
_connection = PyObject_Call(pConnectFunction, Py_None, params);
else if (PyTuple_Check(params))
_connection = PyObject_CallObject(pConnectFunction, params);
else
throw std::runtime_error(base::strfmt("The connection string %s does not represent a Python str, dict or tuple literal. Aborting...", _connstring.c_str()));
if (PyErr_Occurred())
{
PyErr_Print();
PyGILState_Release(state);
throw std::runtime_error(base::strfmt("Could not successfully call %s.connect(%s)\n", _python_module.c_str(), _connstring.c_str()));
}
if (_connection == NULL || _connection == Py_None)
{
Py_DECREF(pConnectFunction);
Py_DECREF(pDBModule);
PyErr_Print();
PyGILState_Release(state);
throw ConnectionError("Connection error", "Could not get a connect object");
}
// Here we have a valid connection object
log_info("Connection to '%s' opened\n", _connstring.c_str());
_cursor = PyObject_CallMethod(_connection, (char*)"cursor", NULL);
if (_cursor == NULL || _cursor == Py_None)
{
PyGILState_Release(state);
throw std::runtime_error("Could not get a cursor to the DB connection\n");
}
}
else
if (PyErr_Occurred())
{
PyErr_Print();
PyGILState_Release(state);
throw std::runtime_error(base::strfmt("Cannot find function %s.connect\n", _python_module.c_str()));
}
initialized = true;
Py_XDECREF(params);
Py_DECREF(pLiteralEvalArgs);
Py_DECREF(pLiteralEvalFunction);
Py_DECREF(pAstModule);
Py_XDECREF(pConnectFunction);
//Py_DECREF(pDBModule);
PyGILState_Release(state);
}
size_t PythonCopyDataSource::count_rows(const std::string &schema, const std::string &table, const std::vector<std::string> &pk_columns,
const CopySpec &spec, const std::vector<std::string> &last_pkeys)
{
_init();
PyGILState_STATE state = PyGILState_Ensure();
std::string q;
if (!_schema_name.empty() && base::trim(_schema_name, "`\"'") != "def")
{
q = base::strfmt("USE %s", schema.c_str());
PyObject_CallMethod(_cursor, (char*)"execute", (char*)"(s)", q.c_str());
if (PyErr_Occurred())
{
PyErr_Print();
log_warning("The query \"USE %s\" failed\n", schema.c_str());
}
}
switch (spec.type)
{
case CopyAll:
if (spec.resume && last_pkeys.size())
q = base::strfmt("SELECT count(*) FROM %s WHERE %s", table.c_str(), get_where_condition(pk_columns, last_pkeys).c_str());
else
q = base::strfmt("SELECT count(*) FROM %s", table.c_str());
break;
case CopyRange:
{
std::string start_expr, end_expr;
if (spec.range_end < 0)
end_expr = "";
else
end_expr = base::strfmt("%s <= %lli", spec.range_key.c_str(), spec.range_end);
start_expr = base::strfmt("%s >= %lli", spec.range_key.c_str(), spec.range_start);
if (!end_expr.empty())
q = base::strfmt("SELECT count(*) FROM %s WHERE %s AND %s", table.c_str(), start_expr.c_str(), end_expr.c_str());
else
q = base::strfmt("SELECT count(*) FROM %s WHERE %s", table.c_str(), start_expr.c_str());
break;
}
case CopyCount:
{
if (spec.resume && last_pkeys.size())
q = base::strfmt("SELECT count(*) FROM %s WHERE %s LIMIT %lli", table.c_str(), get_where_condition(pk_columns, last_pkeys).c_str(), spec.row_count);
else
q = base::strfmt("SELECT count(*) FROM %s LIMIT %lli", table.c_str(), spec.row_count);
break;
}
case CopyWhere:
{
q = base::strfmt("SELECT count(*) FROM %s WHERE %s", table.c_str(), spec.where_expression.c_str());
break;
}
}
if (PyObject_CallMethod(_cursor, (char*)"execute", (char*)"(s)", q.c_str()) == NULL)
{
PyGILState_Release(state);
throw ConnectionError("Python DB API Module query error", "Query '"+q+"' failed");
}
PyObject * row = PyObject_CallMethod(_cursor, (char*)"fetchone", NULL);
if (!row || !PySequence_Check(row) || PySequence_Size(row) != 1)
{
if (PyErr_Occurred())
PyErr_Print();
PyGILState_Release(state);
throw ConnectionError("Python DB API Module query error", "The query '"+q+"' returned unexpected results");
}
PyObject *element = PySequence_GetItem(row, 0);
size_t count = (size_t)PyInt_AsUnsignedLongLongMask(element);
Py_DECREF(element);
Py_DECREF(row);
PyGILState_Release(state);
if ((spec.type == CopyAll || spec.type == CopyWhere) && spec.max_count > 0 && spec.max_count < (long long)count)
count = spec.max_count;
return count;
}
boost::shared_ptr<std::vector<ColumnInfo> > PythonCopyDataSource::begin_select_table(const std::string &schema, const std::string &table,
const std::vector<std::string> &pk_columns,
const std::string &select_expression,
const CopySpec &spec, const std::vector<std::string> &last_pkeys)
{
_init();
boost::shared_ptr<std::vector<ColumnInfo> > columns(new std::vector<ColumnInfo>());
_columns = columns;
_schema_name = schema;
_table_name = table;
std::string q;
PyGILState_STATE state = PyGILState_Ensure();
if (!_cursor)
std::runtime_error("No python cursor available");
if (!_schema_name.empty() && _schema_name != "def")
{
q = base::strfmt("USE %s", schema.c_str());
PyObject_CallMethod(_cursor, (char*)"execute", (char*)"(s)", q.c_str());
if (PyErr_Occurred())
{
PyErr_Print();
log_warning("The query \"USE %s\" failed\n", schema.c_str());
}
}
QueryBuilder select_query;
select_query.select_columns(select_expression);
select_query.select_from_table(table);
select_query.add_orderby(boost::algorithm::join(pk_columns, ", "));
if (spec.type == CopyCount || spec.max_count > 0)
select_query.add_limit(base::strfmt("%lli", spec.row_count));
if (spec.resume && last_pkeys.size())
select_query.add_where(get_where_condition(pk_columns, last_pkeys));
if (spec.type == CopyRange)
{
select_query.add_where(base::strfmt("%s >= %lli", spec.range_key.c_str(), spec.range_start));
if (spec.range_end >= 0)
select_query.add_where(base::strfmt("%s <= %lli", spec.range_key.c_str(), spec.range_end));
}
if (spec.type == CopyWhere)
select_query.add_where(spec.where_expression);
q = select_query.build_query();
if (PyObject_CallMethod(_cursor, (char*)"execute", (char*)"(s)", q.c_str()) == NULL)
{
PyGILState_Release(state);
throw ConnectionError("Python DB API Module query error", "Query '"+q+"' failed");
}
PyObject * desc = PyObject_GetAttrString(_cursor, "description");
if (!desc || !PySequence_Check(desc))
{
if (PyErr_Occurred())
PyErr_Print();
PyGILState_Release(state);
throw ConnectionError("Python DB API Module query error",
"Could not get a resulset descriptor for the query '"+q+"' returned unexpected results");
}
for (int i = 0; i < PySequence_Length(desc); i++)
{
PyObject *column_info_tuple = PySequence_GetItem(desc, i);
if (!column_info_tuple || !PySequence_Check(column_info_tuple) || PySequence_Length(column_info_tuple) < 2)
{
if (PyErr_Occurred())
PyErr_Print();
PyGILState_Release(state);
throw ConnectionError("Python DB API Module query error",
"Resulset descriptor for the query '"+q+"' has the wrong format");
}
ColumnInfo info;
PyObject *item = PySequence_GetItem(column_info_tuple, 0);
pystring_to_string(item, info.source_name);
Py_DECREF(item);
item = PySequence_GetItem(column_info_tuple, 1);
pystring_to_string(item, info.source_type);
Py_DECREF(item);
info.source_length = 0; //The actual value will be taken from the target
info.is_unsigned = false; //The actual value will be taken from the target
info.is_long_data = false;
info.is_long_data = false;
columns->push_back(info);
Py_DECREF(column_info_tuple);
}
Py_DECREF(desc);
_column_count = columns->size();
PyGILState_Release(state);
return columns;
}
void PythonCopyDataSource::end_select_table()
{
}
bool PythonCopyDataSource::fetch_row(RowBuffer &rowbuffer)
{
PyGILState_STATE state = PyGILState_Ensure();
if (!_cursor || _cursor == Py_None)
{
if (PyErr_Occurred())
PyErr_Print();
log_error("No cursor object available while attempting to fetch a row. Skipping table %s\n",
_table_name.c_str());
PyGILState_Release(state);
return false;
}
PyObject * row = PyObject_CallMethod(_cursor, (char*)"fetchone", NULL);
if (row == NULL || row == Py_None)
{
PyGILState_Release(state);
return false;
}
char *buffer;
size_t buffer_len;
PyObject * element;
for (size_t i=0; i<_column_count; ++i)
{
element = PySequence_GetItem(row, i);
if (rowbuffer.check_if_blob() || (*_columns)[i].is_long_data || (*_columns)[i].target_type == MYSQL_TYPE_GEOMETRY)
{
if (element == Py_None)
{
rowbuffer.finish_field(true);
Py_DECREF(element);
continue;
}
if (PyUnicode_Check(element))
{
PyObject *element_ref = element;
element = PyUnicode_AsUTF8String(element);
Py_DECREF(element_ref);
if (element == NULL || PyErr_Occurred())
{
if (PyErr_Occurred())
PyErr_Print();
log_error("An error occurred while encoding unicode data as UTF-8 in a long field object at column %s.%s. Skipping table!\n.",
_table_name.c_str(), (*_columns)[i].source_name.c_str() );
PyGILState_Release(state);
return false;
}
}
else
if (!PyBuffer_Check(element)) // Old-style buffers are the interface specified in PEP 249 for BLOB data. Attempt to convert.
{
PyObject *element_copy = element;
element = PyBuffer_FromObject(element, 0, Py_END_OF_BUFFER);
Py_DECREF(element_copy);
if (PyErr_Occurred())
{
PyErr_Print();
Py_XDECREF(element);
log_error("Unexpected value for BLOB object at column %s.%s. Skipping table!\n.",
_table_name.c_str(), (*_columns)[i].source_name.c_str() );
PyGILState_Release(state);
return false;
}
}
const char *blob_read_buffer;
Py_ssize_t blob_read_buffer_len;
int res = PyObject_AsReadBuffer(element, (const void **) &blob_read_buffer, &blob_read_buffer_len);
if (res != 0)
{
if (PyErr_Occurred())
PyErr_Print();
log_error("Could not get a read buffer for the BLOB column %s.%s. Skipping table!\n",
_table_name.c_str(), (*_columns)[i].source_name.c_str() );
Py_DECREF(element);
PyGILState_Release(state);
return false;
}
if (blob_read_buffer_len > _max_parameter_size)
{
if (_abort_on_oversized_blobs)
{
PyGILState_Release(state);
throw std::runtime_error(base::strfmt("oversized blob found in table %s.%s, size: %lu",
_schema_name.c_str(), _table_name.c_str(),
(long unsigned int) blob_read_buffer_len ));
}
else
{
log_error("Oversized blob found in table %s.%s, size: %lu",
_schema_name.c_str(), _table_name.c_str(),
(long unsigned int) blob_read_buffer_len);
rowbuffer.finish_field(true);
Py_DECREF(element);
continue;
}
}
else // Proceed to copy from the buffer
{
Py_ssize_t copied_bytes = 0;
if (!blob_read_buffer_len) // empty buffer
{
rowbuffer[i].buffer_length = *rowbuffer[i].length = (unsigned long)blob_read_buffer_len;
rowbuffer[i].buffer = NULL;
}
while (copied_bytes < blob_read_buffer_len)
{
Py_ssize_t this_pass_size = std::min(blob_read_buffer_len - copied_bytes, (Py_ssize_t) _max_blob_chunk_size);
// ---- Begin Section: This will fail if multiple passes are done. TODO: Fix this.
if (_use_bulk_inserts)
{
if (rowbuffer[i].buffer_length)
free(rowbuffer[i].buffer);
*rowbuffer[i].length = (unsigned long)blob_read_buffer_len;
rowbuffer[i].buffer_length = (unsigned long)blob_read_buffer_len;
rowbuffer[i].buffer = malloc(blob_read_buffer_len);
memcpy(rowbuffer[i].buffer, blob_read_buffer, blob_read_buffer_len);
}
else
rowbuffer.send_blob_data(blob_read_buffer + copied_bytes, this_pass_size);
// ---- End Section
copied_bytes += this_pass_size;
}
rowbuffer.finish_field(false);
Py_DECREF(element);
continue;
}
}
bool was_null = element == Py_None;
enum enum_field_types target_type = (*_columns)[i].target_type;
bool is_unsigned = (*_columns)[i].is_unsigned;
switch (target_type)
{
case MYSQL_TYPE_TINY:
rowbuffer.prepare_add_tiny(buffer, buffer_len);
if (!was_null)
{
if (is_unsigned)
*( (unsigned char *) buffer) = (unsigned char) PyInt_AsLong(element);
else
*buffer = (char) PyInt_AsLong(element);
}
rowbuffer.finish_field(was_null);
break;
case MYSQL_TYPE_YEAR:
case MYSQL_TYPE_SHORT:
rowbuffer.prepare_add_short(buffer, buffer_len);
if (!was_null)
{
if (is_unsigned)
*( (unsigned short *) buffer) = (unsigned short) PyInt_AsLong(element);
else
*( (short *) buffer) = (short) PyInt_AsLong(element);
}
rowbuffer.finish_field(was_null);
break;
case MYSQL_TYPE_INT24:
case MYSQL_TYPE_LONG:
rowbuffer.prepare_add_long(buffer, buffer_len);
if (!was_null)
{
if (is_unsigned)
*( (unsigned long *) buffer) = PyInt_AsUnsignedLongMask(element);
else
*( (long *) buffer) = PyInt_AsLong(element);
}
rowbuffer.finish_field(was_null);
break;
case MYSQL_TYPE_LONGLONG:
rowbuffer.prepare_add_bigint(buffer, buffer_len);
if (!was_null)
{
if (is_unsigned)
*( (unsigned long long *) buffer) = PyInt_Check(element) ? PyInt_AsUnsignedLongLongMask(element) : PyLong_AsUnsignedLongLong(element);
else
*( (long long *) buffer) = PyLong_AsLongLong(element);
}
rowbuffer.finish_field(was_null);
break;
case MYSQL_TYPE_FLOAT:
rowbuffer.prepare_add_float(buffer, buffer_len);
if (!was_null)
*( (float *) buffer) = (float) PyFloat_AsDouble(element);
rowbuffer.finish_field(was_null);
break;
case MYSQL_TYPE_DOUBLE:
rowbuffer.prepare_add_double(buffer, buffer_len);
if (!was_null)
*( (double *) buffer) = PyFloat_AsDouble(element);
rowbuffer.finish_field(was_null);
break;
case MYSQL_TYPE_TIME:
case MYSQL_TYPE_DATE:
case MYSQL_TYPE_NEWDATE:
case MYSQL_TYPE_DATETIME:
case MYSQL_TYPE_TIMESTAMP:
rowbuffer.prepare_add_time(buffer, buffer_len);
// The select query can yield these fields as Unicode/strings or as datetime.* objects
if (element == Py_None) // element is NULL
((MYSQL_TIME *) buffer)->time_type = MYSQL_TIMESTAMP_NONE;
else
{ if (PyObject_HasAttrString(element, "isoformat")) // element is a python datetime.* object
{
PyObject *old_ref = element;
element = PyObject_CallMethod(element, (char*)"isoformat", NULL); // Will return an ISO 8601 string representation of the date/time/datetime object
Py_DECREF(old_ref);
}
if (PyUnicode_Check(element) || PyString_Check(element)) // element is a string (sqlite sends time data as strings)
{
std::string elem_str;
pystring_to_string(element, elem_str);
BaseConverter::convert_date_time(elem_str.c_str(), (MYSQL_TIME*)buffer, rowbuffer[i].buffer_type);
}
else
{
PyGILState_Release(state);
throw std::logic_error(base::strfmt("Wrong python type for date/time/datetime column %s found in table %s.%s: "
"A string or datetime.* object is expected",
(*_columns)[i].source_name.c_str(), _schema_name.c_str(), _table_name.c_str()));
}
}
rowbuffer.finish_field(was_null);
break;
case MYSQL_TYPE_NEWDECIMAL:
case MYSQL_TYPE_STRING:
case MYSQL_TYPE_VAR_STRING:
case MYSQL_TYPE_BIT:
unsigned long *length;
rowbuffer.prepare_add_string(buffer, buffer_len, length);
if (!was_null)
{
// Target type can be MYSQL_TYPE_STRING for decimal columns and yet values can be ints or floats
// If that's the case, get str(element) for insertion:
if (PyFloat_Check(element) || PyInt_Check(element) || PyLong_Check(element))
{
PyObject *elem_ref = element;
element = PyObject_Str(element);
Py_DECREF(elem_ref);
}
if (PyUnicode_Check(element))
{
PyObject *ref = PyUnicode_AsUTF8String(element);
if (ref)
{
char *s;
Py_ssize_t len;
PyString_AsStringAndSize(ref, &s, &len);
if (buffer_len < (size_t)len)
{
log_error("Truncating data in column %s from %lul to %lul. Possible loss of data.\n",
(*_columns)[i].source_name.c_str(),
(long unsigned int) len, (long unsigned int) buffer_len);
len = buffer_len;
}
memcpy(buffer, s, len);
*length = (unsigned long)len;
Py_DECREF(ref);
}
else
{
log_error("Could not convert unicode string to UTF-8\n");
PyGILState_Release(state);
return false;
}
}
else
if (PyString_Check(element))
{
char *s;
Py_ssize_t len;
PyString_AsStringAndSize(element, &s, &len);
if (buffer_len < (size_t)len)
{
log_error("Truncating data in column %s from %lul to %lul. Possible loss of data.\n",
(*_columns)[i].source_name.c_str(),
(long unsigned int) len, (long unsigned int) buffer_len);
len = buffer_len;
}
memcpy(buffer, s, len);
*length = (unsigned long)len;
}
else // Neither a PyUnicode nor a PyString object. This should be an error:
{
log_error("The python object for column %s is neither a PyUnicode nor a PyString object. Skipping table...\n", (*_columns)[i].source_name.c_str());
PyGILState_Release(state);
return false;
}
}
rowbuffer.finish_field(was_null);
break;
case MYSQL_TYPE_NULL:
rowbuffer[i].buffer_length = 0;
break;
default:
Py_DECREF(element);
PyGILState_Release(state);
throw std::logic_error(base::strfmt("Unhandled MySQL type %i for column '%s'", (*_columns)[i].target_type, (*_columns)[i].target_name.c_str()));
}
Py_DECREF(element);
}
PyGILState_Release(state);
return true;
}
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