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rwxr-xr-x |
4,096 |
alignment
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4,096 |
builtin_models
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4,096 |
common
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4,096 |
hmm
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35 |
main
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4,096 |
pore_model
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60 |
test
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67 |
thirdparty
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17,005 |
nanopolish_call_methylation.cpp
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432 |
nanopolish_call_methylation.h
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53,665 |
nanopolish_call_variants.cpp
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424 |
nanopolish_call_variants.h
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13,435 |
nanopolish_extract.cpp
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397 |
nanopolish_extract.h
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3,703 |
nanopolish_getmodel.cpp
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420 |
nanopolish_getmodel.h
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6,130 |
nanopolish_haplotype.cpp
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4,082 |
nanopolish_haplotype.h
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10,283 |
nanopolish_index.cpp
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373 |
nanopolish_index.h
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36,455 |
nanopolish_methyltrain.cpp
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1,074 |
nanopolish_methyltrain.h
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14,316 |
nanopolish_phase_reads.cpp
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412 |
nanopolish_phase_reads.h
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38,721 |
nanopolish_polya_estimator.cpp
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436 |
nanopolish_polya_estimator.h
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24,496 |
nanopolish_raw_loader.cpp
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1,451 |
nanopolish_raw_loader.h
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7,589 |
nanopolish_read_db.cpp
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2,366 |
nanopolish_read_db.h
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17,397 |
nanopolish_scorereads.cpp
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1,375 |
nanopolish_scorereads.h
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48,589 |
nanopolish_squiggle_read.cpp
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12,970 |
nanopolish_squiggle_read.h
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14,927 |
nanopolish_train_poremodel_from_basecalls.cpp
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527 |
nanopolish_train_poremodel_from_basecalls.h
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5,005 |
nanopolish_variant_db.cpp
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4,669 |
nanopolish_variant_db.h
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10,668 |
nanopolish_vcf2fasta.cpp
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456 |
nanopolish_vcf2fasta.h
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12,387 |
training_core.cpp
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6,141 |
training_core.hpp
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