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from setuptools import setup, find_packages
from codecs import open
from os import path
here = path.abspath(path.dirname(__file__))
exec(open('nanosv/version.py').read())
def readme():
with open('README.md') as f:
return f.read()
setup( name='NanoSV',
version=__version__,
description='Structural variation detection tool for Oxford Nanopore data.',
long_description=readme(),
classifiers=[
'Development Status :: 4 - Beta',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: MIT License',
'Programming Language :: Python :: 3',
'Topic :: Scientific/Engineering :: Bio-Informatics'
],
keywords='nanosv sv-caller nanopore',
url='https://github.com/mroosmalen/nanosv',
author='Mark van Roosmalen',
author_email='m.vanroosmalen-2@umcutrecht.nl',
license='MIT',
python_requires='>=3',
install_requires=['pysam>=0.11','pyvcf'],
packages=['nanosv','nanosv.utils','nanosv.classes'],
package_data={'nanosv': ['config.ini','bedfiles/*.bed']},
including_package_data=True,
entry_points={
'console_scripts': [
'NanoSV=nanosv.NanoSV:main'
]
}
)
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