File: asnmacro.1

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.TH ASNMACRO 1 2011-09-02 NCBI "NCBI Tools User's Manual"
.SH NAME
asnmacro \- process ASN.1 biological data per Sequin macros
.SH SYNOPSIS
.B asnmacro
[\|\fB\-\fP\|]
[\|\fB\-b\fP\|]
[\|\fB\-d\fP\|]
[\|\fB\-e\fP\|]
[\|\fB\-i\fP\ \fIfilename\fP\|]
\|\fB\-m\fP\ \fIfilename\fP
[\|\fB\-o\fP\ \fIfilename\fP\|]
[\|\fB\-p\fP\ \fIpath\fP\|]
[\|\fB\-r\fP\ \fIpath\fP\|]
[\|\fB\-s\fP\ \fIstr\fP\|]
[\|\fB\-x\fP\ \fIstr\fP\|]
.SH DESCRIPTION
\fBasnmacro\fP is a command-line tool to run Sequin macros on
annotated biological sequence data represented according to NCBI's
ASN.1 specifications.
.SH OPTIONS
A summary of options is included below.
.TP
\fB\-\fP
Print usage message
.TP
\fB\-b\fP
Input is Binary
.TP
\fB\-d\fP
Output is binary
.TP
\fB\-e\fP
Input is a Seq-Entry
.TP
\fB\-i\fP\ \fIfilename\fP
Single input file
.TP
\fB\-m\fP\ \fIfilename\fP
Macro file
.TP
\fB\-o\fP\ \fIfilename\fP
Single Output file
.TP
\fB\-p\fP\ \fIpath\fP
Path to multiple input files
.TP
\fB\-r\fP\ \fIpath\fP
Path for Results when processing multiple files
.TP
\fB\-s\fP\ \fIstr\fP
Suffix for stripped (output) files
.TP
\fB\-x\fP\ \fIstr\fP
Suffix for input files with \fB-p\fP (\fB.sqn\fP by default)
.SH AUTHOR
The National Center for Biotechnology Information.
.SH SEE ALSO
.ad l
.BR Psequin (1).