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/* corematx.h
* ===========================================================================
*
* PUBLIC DOMAIN NOTICE
* National Center for Biotechnology Information
*
* This software/database is a "United States Government Work" under the
* terms of the United States Copyright Act. It was written as part of
* the author's official duties as a United States Government employee and
* thus cannot be copyrighted. This software/database is freely available
* to the public for use. The National Library of Medicine and the U.S.
* Government have not placed any restriction on its use or reproduction.
*
* Although all reasonable efforts have been taken to ensure the accuracy
* and reliability of the software and data, the NLM and the U.S.
* Government do not and cannot warrant the performance or results that
* may be obtained by using this software or data. The NLM and the U.S.
* Government disclaim all warranties, express or implied, including
* warranties of performance, merchantability or fitness for any particular
* purpose.
*
* Please cite the author in any work or product based on this material.
*
* ===========================================================================
*
* File Name: corematx.h
*
* Author: Hogue
*
* Version Creation Date: 3/20/95
*
* $Revision: 6.0 $
*
* File Description:
* Numerical Recipies in C toolkit-ized
* matrix and vector allocators and free-ers
* see corematx.c for implementation docs.
*
* Modifications:
* --------------------------------------------------------------------------
* Date Name Description of modification
* ------- ---------- -----------------------------------------------------
* 16 Aug Hogue Added PointerPtr typedef * vector allocators
*
* $Log: corematx.h,v $
* Revision 6.0 1997/08/25 18:10:33 madden
* Revision changed to 6.0
*
* Revision 5.0 1996/05/28 14:02:09 ostell
* Set to revision 5.0
*
* Revision 1.3 1995/08/28 19:31:53 kans
* version 4.1
*
* Revision 1.2 1995/08/03 21:44:33 kans
* changes
*
* Revision 1.1 1995/08/02 17:07:15 kans
* Initial revision
*
*
* ==========================================================================
*/
typedef FloatHiPtr *FloatHiPtrPtr;
typedef FloatLoPtr *FloatLoPtrPtr;
typedef Int2Ptr *Int2PtrPtr;
typedef Int4Ptr *Int4PtrPtr;
typedef FloatLoPtr **FloatLoPtrPtrPtr;
typedef Pointer *PointerPtr;
/* To use NUMERICAL RECIPIES IN C wrapper functions */
/* set the compiler define NRTONCBI */
#ifndef _COREMATX_
#define _COREMATX_
#ifdef __cplusplus
extern "C" {
#endif
/* function prototypes here */
FloatHiPtr LIBCALL FHVector (Int4 nl, Int4 nh);
FloatLoPtr LIBCALL FLVector (Int4 nl, Int4 nh);
Int2Ptr LIBCALL I2Vector (Int4 nl, Int4 nh);
Int4Ptr LIBCALL I4Vector (Int4 nl, Int4 nh);
UcharPtr LIBCALL UCVector (Int4 nl, Int4 nh);
Uint4Ptr LIBCALL UI4Vector (Int4 nl, Int4 nh);
PointerPtr LIBCALL PTRVector(Int4 nl, Int4 nh);
void LIBCALL FHVectorFree (FloatHiPtr v, Int4 nl);
void LIBCALL FLVectorFree (FloatLoPtr v, Int4 nl);
void LIBCALL I2VectorFree (Int2Ptr v, Int4 nl);
void LIBCALL I4VectorFree (Int4Ptr v, Int4 nl);
void LIBCALL UCVectorFree (UcharPtr v, Int4 nl);
void LIBCALL UI4VectorFree (Uint4Ptr v, Int4 nl);
void LIBCALL PTRVectorFree(PointerPtr v, Int4 nl);
FloatHiPtrPtr LIBCALL FHMatrix (Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
FloatLoPtrPtr LIBCALL FLMatrix (Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
Int2PtrPtr LIBCALL I2Matrix (Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
Int4PtrPtr LIBCALL I4Matrix (Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
void LIBCALL FLMatrixFree (FloatLoPtr *m, Int4 nrl, Int4 ncl);
void LIBCALL FHMatrixFree (FloatHiPtr *m, Int4 nrl, Int4 ncl);
void LIBCALL I2MatrixFree (Int2Ptr *m, Int4 nrl, Int4 ncl);
void LIBCALL I4MatrixFree (Int4Ptr *m, Int4 nrl, Int4 ncl);
FloatLoPtrPtr LIBCALL FLSubmatrix (FloatLoPtr *a, Int4 oldrl, Int4 oldrh,
Int4 oldcl, Int4 oldch, Int4 newrl, Int4 newcl);
void LIBCALL FLSubmatrixFree (FloatLoPtr *b, Int4 nrl);
FloatHiPtrPtr LIBCALL FHConvtMatrix (FloatHiPtr a, Int4 nrl, Int4 nrh, Int4 ncl,
Int4 nch);
FloatLoPtrPtr LIBCALL FLConvtMatrix (FloatLoPtr a, Int4 nrl, Int4 nrh, Int4 ncl,
Int4 nch);
Int2PtrPtr LIBCALL I2ConvtMatrix (Int2Ptr a, Int4 nrl, Int4 nrh, Int4 ncl,
Int4 nch);
Int4PtrPtr LIBCALL I4ConvtMatrix (Int4Ptr a, Int4 nrl, Int4 nrh, Int4 ncl,
Int4 nch);
void LIBCALL FHConvtFree (FloatHiPtr *b, Int4 nrl);
void LIBCALL FLConvtFree (FloatLoPtr *b, Int4 nrl);
void LIBCALL I2ConvtFree (Int2Ptr *b, Int4 nrl);
void LIBCALL I4ConvtFree (Int4Ptr *b, Int4 nrl);
FloatLoPtrPtrPtr LIBCALL FL3Matrix (Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch, Int4 ndl,
Int4 ndh);
void LIBCALL FL3MatrixFree (FloatLoPtr **b, Int4 nrl, Int4 ncl, Int4 ndl);
/* Numerical Recipies in C "Wrappers" */
#ifdef NRTONCBI
void nrerror (char error_text[]);
FloatLoPtr vector (Int4 nl, Int4 nh);
Int4Ptr ivector (Int4 nl, Int4 nh);
FloatHiPtr dvector (Int4 nl, Int4 nh);
UcharPtr cvector (Int4 nl, Int4 nh);
Uint4Ptr lvector (Int4 nl, Int4 nh);
FloatLoPtr *matrix (Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
FloatHiPtr *dmatrix (Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
Int4Ptr *imatrix (Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
void free_dvector (FloaHiPtr v, Int4 nl, Int4 nh);
void free_vector (FloatLoPtr v, Int4 nl, Int4 nh);
void free_cvector (UcharPtr v, Int4 nl, Int4 nh);
void free_lvector (Uint4Ptr v, Int4 nl, Int4 nh);
void free_ivector (Int4Ptr v, Int4 nl, Int4 nh);
void free_imatrix (Int4Ptr *m, Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
void free_matrix (FloatLoPtr *m, Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
void free_dmatrix (FloatHiPtr *m, Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch);
FloatLoPtr convert_matrix (FloatLoPtr a, Int4 nrl, Int4 nrh, Int4 ncl,
Int2 nch);
void free_convert_matrix (FloatLoPtr *b, Int4 nrl, Int4 nrh, Int4 ncl,
Int4 nch);
FloatLoPtr *submatrix (FloatLoPtr *a, Int4 oldrl, Int4 oldrh,
Int4 oldcl, Int4 oldch, Int4 newrl, Int4 newcl);
void free_submatrix (FloatLoPtr *b, Int4 nrl, Int4 nrh,
Int4 ncl, Int4 nch);
FloatLoPtr **f3tensor (Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch, Int4 ndl,
Int4 ndh);
void free_f3tensor (FloatLoPtr **t, Int4 nrl, Int4 nrh, Int4 ncl, Int4 nch,
Int4 ndl, Int4 ndh);
#endif
#ifdef __cplusplus
}
#endif
#endif
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