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|
Seq-submit ::= {
sub {
contact {
name "R. Taussig" ,
address {
"Room 123, Bldg 82" ,
"Univ of x" ,
"City EH 23 OR" ,
"Country" } ,
phone "1-222-122-22-2-2-2" ,
email "rt@123.xyz" } ,
cit {
authors {
names
std {
{
name
name {
last "Taussig" ,
initials "R" } ,
affil
std {
affil "Univ of x" ,
div "Dept of Y" ,
city "YourCity" ,
sub "YourState" ,
country "Your country" ,
street "123 Your Street" } ,
is-corr TRUE } ,
{
name
name {
last "Scheller" ,
initials "R.H." } } } } ,
imp {
date
std {
year 1986 ,
month 4 ,
day 22 } } } ,
reldate
std {
year 1986 ,
month 10 ,
day 1 } } ,
data entrys {
set {
class nuc-prot ,
descr {
title "Aplysia californica FMRFamide mRNA, 3' end, clone FMRF-2. and
translated products" ,
comment "FMRF-2 lacks a 192 bp region spanning residues 1787-1978 on
the genomic sequence (M14958), which would come after position 191. This
clone lacks the consensus acceptor site 'ag'. The dinucleotide 'at' is
present at the 3' border of the deleted region, and therefore, this sequence
probably does not arise from an RNA processing event. The highly repetitive
nature of much of the gene coupled with sequence polymorphisms leaves open
the possibility of an organization which would conform to the splicing
consensus rules. Alternatively, the deletion may represent a cloning
artifact." ,
pub {
pub {
article {
title {
name "The Aplysia FMRFamide gene encodes sequences related to
mammalian brain peptides" } ,
authors {
names
str {
"Taussig,R." ,
"Scheller,R.H." } } ,
from
journal {
title {
iso-jta "DNA" } ,
imp {
date
std {
year 1986 } ,
volume "5" ,
pages "453-461" } } } } } ,
org {
taxname "Aplysia californica" } } ,
seq-set {
seq {
id {
local
id 1 } ,
descr {
title "Aplysia californica FMRFamide mRNA, 3' end, clone FMRF-2." ,
genbank {
source "Aplysia californica abdominal ganglion, cDNA to mRNA,
clone FMRF-2." ,
keywords {
"FMRFamide" ,
"neuropeptide" } ,
origin "About 192 bp after segment [DNA 5, 453-461 (1986)]." ,
date "31-AUG-1987" ,
div "INV" ,
taxonomy "Eukaryota; Animalia; Eumetazoa; Mollusca; Gastropoda;
Opisthobranchia; Anaspidea; Aplysiidae." } } ,
inst {
repr raw ,
mol rna ,
length 484 ,
topology linear ,
strand ss ,
seq-data
ncbi2na 'D84023F38AFEA00BB2826182E8C02BF38AFEA009BE81E38EE8406BD
388FE900B7E81638EE8406BD398FEA00B7E81E08EE8406BD388FE900B7E81E08EC8406BD388FEA
01AFCE23FAD82EFAA3D40CDAA64249801B4E1048740101848109840C2D700C412E33FBC106EEBB
8FDF5F4CCF3F9F840EE3FA8C0B100EF'H } ,
annot {
{
data
ftable {
{
data
rna {
type mRNA } ,
location
int {
from 0 ,
to 483 ,
id
local
id 1 ,
fuzz-from
lim lt } ,
qual {
{
qual "note" ,
val "FMRF2 mRNA" } } } ,
{
data
imp {
key "mat_peptide" ,
loc "12..23" } ,
location
int {
from 11 ,
to 22 ,
id
local
id 1 } ,
qual {
{
qual "note" ,
val "FMRFamide copy X" } ,
{
qual "codon_start" ,
val "1" } } } ,
{
data
imp {
key "mat_peptide" ,
loc "60..71" } ,
location
int {
from 59 ,
to 70 ,
id
local
id 1 } ,
qual {
{
qual "note" ,
val "FMRFamide copy X+1" } ,
{
qual "codon_start" ,
val "1" } } } ,
{
data
imp {
key "mat_peptide" ,
loc "108..119" } ,
location
int {
from 107 ,
to 118 ,
id
local
id 1 } ,
qual {
{
qual "note" ,
val "FMRFamide copy X+2" } ,
{
qual "codon_start" ,
val "1" } } } ,
{
data
imp {
key "mat_peptide" ,
loc "156..167" } ,
location
int {
from 155 ,
to 166 ,
id
local
id 1 } ,
qual {
{
qual "note" ,
val "FMRFamide copy X+3" } ,
{
qual "codon_start" ,
val "1" } } } ,
{
data
imp {
key "mat_peptide" ,
loc "204..215" } ,
location
int {
from 203 ,
to 214 ,
id
local
id 1 } ,
qual {
{
qual "note" ,
val "FMRFamide copy X+4" } ,
{
qual "codon_start" ,
val "1" } } } ,
{
data
imp {
key "mat_peptide" ,
loc "252..263" } ,
location
int {
from 251 ,
to 262 ,
id
local
id 1 } ,
qual {
{
qual "note" ,
val "FMRFamide copy X+5" } ,
{
qual "codon_start" ,
val "1" } } } ,
{
data
imp {
key "mat_peptide" ,
loc "273..284" } ,
location
int {
from 272 ,
to 283 ,
id
local
id 1 } ,
qual {
{
qual "note" ,
val "FMRFamide copy X+6" } ,
{
qual "codon_start" ,
val "1" } } } } } } } ,
seq {
id {
local
id 2 } ,
descr {
title "FMRFamide precursor" ,
method concept-trans } ,
inst {
repr raw ,
mol aa ,
length 127 ,
seq-data
iupacaa "DKRFMRFGKSVGSDEVDKRFMRFGKSVGTDDVDKRFMRFGKSLGTDDVDKRFMRF
GKSLGTEDVDKRFMRFGKSLGTEDVDKRFMRFGKRFMRFGRSVGDSKYRGASSENVMTTDSKQTTEQATNKS" } ,
annot {
{
data
ftable {
{
data
prot {
desc "FMRFamide precursor" } ,
location
whole
local
id 2 } } } } } } ,
annot {
{
data
ftable {
{
data
cdregion {
frame three ,
code {
id 1 } } ,
product
whole
local
id 2 ,
location
int {
from 0 ,
to 385 ,
id
local
id 1 ,
fuzz-from
lim lt } ,
qual {
{
qual "note" ,
val "(AA at 3)" } } } } } } } } }
|
