File: cdscan.1

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.TH CDSCAN 1 2001-10-05 NCBI "NCBI Tools User's Manual"
.SH NAME
cdscan \- scan through sequence records on the Entrez discs
.SH SYNOPSIS
.B cdscan
[\|\fB\-\fP\|]
[\|\fB\-c\fP\|]
[\|\fB\-f\fP\ \fIN\fP\|]
[\|\fB\-o\fP\ \fIfilename\fP\|]
[\|\fB\-p\fP\|]
[\|\fB\-s\fP\ \fIN\fP\|]
.SH DESCRIPTION
\fBcdscan\fP is a simple program that scans through sequence records
on the Entrez discs.
.SH OPTIONS
A summary of options is included below.
.TP
\fB\-\fP
Print usage message
.TP
\fB\-c\fP
Print SeqIds to output file and progress monitor
.TP
\fB\-f\fP\ \fIN\fP
Output format:
.RS
.PD 0
.IP 1
GenBank (default)
.IP 2
FASTA
.PD
.RE
.TP
\fB\-o\fP\ \fIfilename\fP
Output File (default = stdout)
.TP
\fB\-p\fP
Show progress monitor
.TP
\fB\-s\fP\ \fIN\fP
Type of sequence to scan:
.RS
.PD 0
.IP 1
DNA (default)
.IP 2
Protein
.PD
.RE
.SH AUTHOR
The National Center for Biotechnology Information.