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.TH FMERGE 1 2002-08-23 NCBI "NCBI Tools User's Manual"
.SH NAME
fmerge \- merge FASTA databases
.SH SYNOPSIS
.B fmerge
[\|\fB\-\fP\|]
[\|\fB\-i\fP\ \fIfilename\fP\|]
[\|\fB\-l\fP\ \fIfilename\fP\|]
[\|\fB\-m\fP\ \fIfilename\fP\|]
[\|\fB\-n\fP\ \fIfilename\fP\|]
\fB\-t\fP\ \fIN\fP
.SH DESCRIPTION
\fBfmerge\fP is a program to merge FASTA databases.
.SH OPTIONS
A summary of options is included below.
.TP
\fB\-\fP
Print usage message
.TP
\fB\-i\fP\ \fIfilename\fP
File for index storage (default is \fBindex.nr\fP)
.TP
\fB\-l\fP\ \fIfilename\fP
Log file name (default is \fBfmerge.log\fP)
.TP
\fB\-m\fP\ \fIfilename\fP
Read new sequences (in FASTA format) from \fIfilename\fP (default is
\fBmonth.aa\fP)
.TP
\fB\-n\fP\ \fIfilename\fP
Update \fIfilename\fP (default is \fBnr\fP)
.TP
\fB\-t\fP\ \fIN\fP
Job mode:
.RS
.PD 0
.IP 1
Create index only
.IP 2
Update database from existing index
.IP 3
Create index and update database
.PD
.RE
.SH AUTHOR
The National Center for Biotechnology Information.
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