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Matrix (NeoBio API)
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neobio.alignment</FONT>
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Interface Matrix</H2>
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<DT><B>All Known Implementing Classes:</B> <DD><A HREF="../../neobio/alignment/OutMatrix.html">OutMatrix</A></DD>
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<DT>public interface <A HREF="../../src-html\neobio\alignment\Matrix.html#line.42"><B>Matrix</B></A></DL>
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This interface defines a minimal set of operations that a matrix must implement. This
interface is used by the <A HREF="../../neobio/alignment/Smawk.html">Smawk</A> class to provide a general services
regardless of how the matrix is actually stored.
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<DT><B>Author:</B><DD>Sergio A. de Carvalho Jr.</DD>
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<DT><B>See Also:</B><DD><A HREF="../../neobio/alignment/Smawk.html"><CODE>Smawk</CODE></A></DL>
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<CODE> int</CODE></FONT></TD>
<TD><CODE><B><A HREF="../../neobio/alignment/Matrix.html#numColumns()">numColumns</A></B>()</CODE>
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Returns the number of columns that this matrix has.</TD>
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<CODE> int</CODE></FONT></TD>
<TD><CODE><B><A HREF="../../neobio/alignment/Matrix.html#numRows()">numRows</A></B>()</CODE>
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Returns the number of rows that this matrix has.</TD>
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<CODE> int</CODE></FONT></TD>
<TD><CODE><B><A HREF="../../neobio/alignment/Matrix.html#valueAt(int, int)">valueAt</A></B>(int row,
int col)</CODE>
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Returns the value at an specified row and column.</TD>
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<A NAME="valueAt(int, int)"><!-- --></A><H3>
valueAt</H3>
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public int <A HREF="../../src-html\neobio\alignment\Matrix.html#line.51"><B>valueAt</B></A>(int row,
int col)</PRE>
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<DD>Returns the value at an specified row and column.
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<DT><B>Parameters:</B><DD><CODE>row</CODE> - row number of element to be retrieved<DD><CODE>col</CODE> - column number of element to be retrieved
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numRows</H3>
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public int <A HREF="../../src-html\neobio\alignment\Matrix.html#line.58"><B>numRows</B></A>()</PRE>
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<DD>Returns the number of rows that this matrix has.
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numColumns</H3>
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public int <A HREF="../../src-html\neobio\alignment\Matrix.html#line.65"><B>numColumns</B></A>()</PRE>
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<DD>Returns the number of columns that this matrix has.
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<DT><B>Returns:</B><DD>number of columns</DL>
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