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/*
Copyright 2018, UCAR/Unidata
See COPYRIGHT file for copying and redistribution conditions.
*/
#include "config.h"
#include <stdlib.h>
#include <stdio.h>
#include <string.h>
#include <assert.h>
#include <sys/types.h>
#include <hdf5.h>
/* Older versions of the hdf library may define H5PL_type_t here */
#include <H5PLextern.h>
#include "netcdf.h"
#include "netcdf_filter.h"
#undef TESTODDSIZE
#undef DEBUG
#define FILTER_ID 32768
#define MAXERRS 8
#define MAXPARAMS 32
#define MAXDIMS 8
#define TESTFILE "testfilter_reg.nc"
#define NPARAMS 1
#define PARAMVAL 17
#define NDIMS 4
static size_t dimsize[NDIMS] = {4,4,4,4};
static size_t chunksize[NDIMS] = {4,4,4,4};
static size_t ndims = NDIMS;
static size_t totalproduct = 1; /* x-product over max dims */
static size_t actualproduct = 1; /* x-product over actualdims */
static size_t chunkproduct = 1; /* x-product over actual chunks */
static int nerrs = 0;
static int ncid, varid;
static int dimids[MAXDIMS];
static size_t odom[MAXDIMS];
static float* array = NULL;
static float* expected = NULL;
static unsigned int filterid = 0;
static size_t nparams = 0;
static unsigned int params[MAXPARAMS];
static unsigned int baseline[NPARAMS] = {PARAMVAL};
static struct Base {
unsigned int id;
H5Z_class2_t* info;
} baseinfo;
static const H5Z_class2_t H5Z_REG[1];
/* Forward */
static int filter_test1(void);
static void init(int argc, char** argv);
static void reset(void);
static void odom_reset(void);
static int odom_more(void);
static int odom_next(void);
static int odom_offset(void);
static float expectedvalue(void);
static void verifyparams(void);
#define ERRR do { \
fflush(stdout); /* Make sure our stdout is synced with stderr. */ \
fprintf(stderr, "Sorry! Unexpected result, %s, line: %d\n", \
__FILE__, __LINE__); \
nerrs++;\
} while (0)
static int
check(int err,int line)
{
if(err != NC_NOERR) {
fprintf(stderr,"fail (%d): %s\n",line,nc_strerror(err));
nerrs++;
}
return NC_NOERR;
}
static void
report(const char* msg, int lineno)
{
fprintf(stderr,"fail: line=%d %s\n",lineno,msg);
exit(1);
}
#define CHECK(x) check(x,__LINE__)
#define REPORT(x) report(x,__LINE__)
static int
verifychunks(void)
{
int i;
int store = -1;
size_t localchunks[MAXDIMS];
memset(localchunks,0,sizeof(localchunks));
CHECK(nc_inq_var_chunking(ncid, varid, &store, localchunks));
if(store != NC_CHUNKED) {
fprintf(stderr,"bad chunk store\n");
return 0;
}
for(i=0;i<ndims;i++) {
if(chunksize[i] != localchunks[i]) {
fprintf(stderr,"bad chunk size: %d\n",i);
return 0;
}
}
return 1;
}
static int
create(void)
{
int i;
/* Create a file with one big variable */
CHECK(nc_create(TESTFILE, NC_NETCDF4|NC_CLOBBER, &ncid));
CHECK(nc_set_fill(ncid, NC_NOFILL, NULL));
for(i=0;i<ndims;i++) {
char dimname[1024];
snprintf(dimname,sizeof(dimname),"dim%d",i);
CHECK(nc_def_dim(ncid, dimname, dimsize[i], &dimids[i]));
}
CHECK(nc_def_var(ncid, "var", NC_FLOAT, ndims, dimids, &varid));
return NC_NOERR;
}
static int
verifyfilterinfo(struct Base* info, struct Base* base)
{
int stat = NC_NOERR;
if(info->id != base->id)
{stat = NC_EINVAL; fprintf(stderr,"verifyfilterinfo: id mismatch\n");}
#ifdef USE_HDF5
H5Z_class2_t* h5info = (H5Z_class2_t*)info->info;
H5Z_class2_t* h5base = (H5Z_class2_t*)base->info;
if(h5info->id != h5base->id)
{stat = NC_EINVAL; fprintf(stderr,"verifyfilterinfo: H5Z_class_t: id mismatch\n");}
if(h5info->encoder_present != h5base->encoder_present)
{stat = NC_EINVAL; fprintf(stderr,"verifyfilterinfo: H5Z_class_t: encoder_present mismatch\n");}
if(h5info->decoder_present != h5base->decoder_present)
{stat = NC_EINVAL; fprintf(stderr,"verifyfilterinfo: H5Z_class_t: decoder_present mismatch\n");}
if(h5info->decoder_present != h5base->decoder_present)
{stat = NC_EINVAL; fprintf(stderr,"verifyfilterinfo: H5Z_class_t: decoder_present mismatch\n");}
if(strcmp(h5info->name,h5base->name) != 0)
{stat = NC_EINVAL; fprintf(stderr,"verifyfilterinfo: H5Z_class_t: name mismatch\n");}
if(h5info->can_apply != h5base->can_apply)
{stat = NC_EINVAL; fprintf(stderr,"verifyfilterinfo: H5Z_class_t: can_apply mismatch\n");}
if(h5info->set_local != h5base->set_local)
{stat = NC_EINVAL; fprintf(stderr,"verifyfilterinfo: H5Z_class_t: set_local mismatch\n");}
if(h5info->filter != h5base->filter)
{stat = NC_EINVAL; fprintf(stderr,"verifyfilterinfo: H5Z_class_t: filter mismatch\n");}
#else
stat = NC_ENOTBUILT; fprintf(stderr,"Unknown format\n")}
#endif
return stat;
}
static void
registerfilter(void)
{
struct Base inqinfo;
baseinfo.id = FILTER_ID;
baseinfo.info = (H5Z_class2_t*)&H5Z_REG[0];
CHECK(nc_filter_client_register(baseinfo.id,baseinfo.info));
/* Verify by inquiry */
memset(&inqinfo,0,sizeof(struct Base));
inqinfo.id = FILTER_ID;
inqinfo.info = calloc(1,sizeof(H5Z_class2_t));
if(inqinfo.info == NULL) CHECK(NC_ENOMEM);
CHECK((nc_filter_client_inq(inqinfo.id,(void*)inqinfo.info)));
CHECK((verifyfilterinfo(&inqinfo,&baseinfo)));
nullfree(inqinfo.info);
}
static void
unregisterfilter(void)
{
int stat = NC_NOERR;
struct Base inqinfo;
/* Verify that the filter info is still good */
memset(&inqinfo,0,sizeof(struct Base));
inqinfo.id = FILTER_ID;
inqinfo.info = calloc(1,sizeof(H5Z_class2_t));
if(inqinfo.info == NULL) CHECK(NC_ENOMEM);
CHECK((stat=nc_filter_client_inq(inqinfo.id,(void*)inqinfo.info)));
CHECK((verifyfilterinfo(&inqinfo,&baseinfo)));
/* Unregister */
inqinfo.id = FILTER_ID;
CHECK((stat = nc_filter_client_unregister(inqinfo.id)));
/* Inq again to verify unregistered */
inqinfo.id = FILTER_ID;
stat=nc_filter_client_inq(inqinfo.id,(void*)inqinfo.info);
if(stat != NC_ENOFILTER) {
fprintf(stderr,"unregister: failed\n");
CHECK(NC_EFILTER);
}
nullfree(inqinfo.info);
}
static void
setvarfilter(void)
{
/* NOOP the params */
CHECK(nc_def_var_filter(ncid,varid,FILTER_ID,NPARAMS,baseline));
verifyparams();
}
static void
verifyparams(void)
{
int i;
CHECK(nc_inq_var_filter(ncid,varid,&filterid,&nparams,params));
if(filterid != FILTER_ID) REPORT("id mismatch");
if(nparams != NPARAMS) REPORT("nparams mismatch");
for(i=0;i<nparams;i++) {
if(params[i] != baseline[i])
REPORT("param mismatch");
}
}
static int
openfile(void)
{
unsigned int* params = NULL;
/* Open the file and check it. */
CHECK(nc_open(TESTFILE, NC_NOWRITE, &ncid));
CHECK(nc_inq_varid(ncid, "var", &varid));
/* Check the compression algorithm */
CHECK(nc_inq_var_filter(ncid,varid,&filterid,&nparams,NULL));
if(nparams > 0) {
params = (unsigned int*)malloc(sizeof(unsigned int)*nparams);
if(params == NULL)
return NC_ENOMEM;
CHECK(nc_inq_var_filter(ncid,varid,&filterid,&nparams,params));
}
if(filterid != FILTER_ID) {
fprintf(stderr,"open: test id mismatch: %d\n",filterid);
return NC_EFILTER;
}
if(nparams != NPARAMS) {
size_t i;
unsigned int inqparams[MAXPARAMS];
fprintf(stderr,"nparams mismatch\n");
for(nerrs=0,i=0;i<nparams;i++) {
if(inqparams[i] != baseline[i]) {
fprintf(stderr,"open: testparam mismatch: %ld\n",(unsigned long)i);
nerrs++;
}
}
}
if(nerrs > 0) return NC_EFILTER;
if(params) free(params);
/* Verify chunking */
if(!verifychunks())
return 0;
fflush(stderr);
return 1;
}
static int
setchunking(void)
{
int store;
store = NC_CHUNKED;
CHECK(nc_def_var_chunking(ncid,varid,store,chunksize));
if(!verifychunks())
return NC_EINVAL;
return NC_NOERR;
}
static void
fill(void)
{
odom_reset();
if(1) {
int i;
if(actualproduct <= 1) abort();
for(i=0;i<actualproduct;i++)
expected[i] = (float)i;
} else {
while(odom_more()) {
int offset = odom_offset();
float expect = expectedvalue();
expected[offset] = expect;
odom_next();
}
}
}
static int
compare(void)
{
int errs = 0;
fprintf(stderr,"data comparison: |array|=%ld\n",(unsigned long)actualproduct);
if(1)
{
int i;
for(i=0;i<actualproduct;i++) {
if(expected[i] != array[i]) {
fprintf(stderr,"data mismatch: array[%d]=%f expected[%d]=%f\n",
i,array[i],i,expected[i]);
errs++;
if(errs >= MAXERRS)
break;
}
}
} else
{
odom_reset();
while(odom_more()) {
int offset = odom_offset();
float expect = expectedvalue();
if(array[offset] != expect) {
fprintf(stderr,"data mismatch: array[%d]=%f expected=%f\n",
offset,array[offset],expect);
errs++;
if(errs >= MAXERRS)
break;
}
odom_next();
}
}
if(errs == 0)
fprintf(stderr,"no data errors\n");
return (errs == 0);
}
static void
showparameters(void)
{
int i;
fprintf(stderr,"test: nparams=%ld: params=",(unsigned long)nparams);
for(i=0;i<nparams;i++) {
fprintf(stderr," %u",params[i]);
}
fprintf(stderr,"\n");
for(i=0;i<ndims;i++) {
if(i==0)
fprintf(stderr,"dimsizes=%ld",(unsigned long)dimsize[i]);
else
fprintf(stderr,",%ld",(unsigned long)dimsize[i]);
}
fprintf(stderr,"\n");
for(i=0;i<ndims;i++) {
if(i==0)
fprintf(stderr,"chunksizes=%ld",(unsigned long)chunksize[i]);
else
fprintf(stderr,",%ld",(unsigned long)chunksize[i]);
}
fprintf(stderr,"\n");
fflush(stderr);
}
static int
filter_test1(void)
{
int ok = 1;
reset();
fprintf(stderr,"test1: compression.\n");
create();
setchunking();
setvarfilter();
showparameters();
CHECK(nc_enddef(ncid));
/* Fill in the array */
fill();
/* write array */
CHECK(nc_put_var(ncid,varid,expected));
CHECK(nc_close(ncid));
fprintf(stderr,"test1: decompression.\n");
reset();
openfile();
CHECK(nc_get_var_float(ncid, varid, array));
ok = compare();
CHECK(nc_close(ncid));
return ok;
}
/**************************************************/
/* Utilities */
static void
reset()
{
memset(array,0,sizeof(float)*actualproduct);
}
static void
odom_reset(void)
{
memset(odom,0,sizeof(odom));
}
static int
odom_more(void)
{
return (odom[0] < dimsize[0]);
}
static int
odom_next(void)
{
int i; /* do not make unsigned */
for(i=ndims-1;i>=0;i--) {
odom[i] += 1;
if(odom[i] < dimsize[i]) break;
if(i == 0) return 0; /* leave the 0th entry if it overflows*/
odom[i] = 0; /* reset this position*/
}
return 1;
}
static int
odom_offset(void)
{
int i;
int offset = 0;
for(i=0;i<ndims;i++) {
offset *= dimsize[i];
offset += odom[i];
}
return offset;
}
static float
expectedvalue(void)
{
int i;
float offset = 0;
for(i=0;i<ndims;i++) {
offset *= dimsize[i];
offset += odom[i];
}
return offset;
}
static void
init(int argc, char** argv)
{
int i;
/* Setup various variables */
totalproduct = 1;
actualproduct = 1;
chunkproduct = 1;
for(i=0;i<NDIMS;i++) {
totalproduct *= dimsize[i];
if(i < ndims) {
actualproduct *= dimsize[i];
chunkproduct *= chunksize[i];
}
}
/* Allocate max size */
array = (float*)calloc(1,sizeof(float)*actualproduct);
expected = (float*)calloc(1,sizeof(float)*actualproduct);
/* Register the filter */
registerfilter();
}
/**************************************************/
int
main(int argc, char **argv)
{
#ifdef DEBUG
H5Eprint(stderr);
nc_set_log_level(1);
#endif
init(argc,argv);
if(!filter_test1()) ERRR;
/* Unregister filter */
unregisterfilter();
exit(nerrs > 0?1:0);
}
/**************************************************/
/* In-line filter code */
#define H5Z_FILTER_REG FILTER_ID
#ifndef DLL_EXPORT
#define DLL_EXPORT
#endif
static int paramcheck(size_t nparams, const unsigned int* params);
/* Forward */
static int paramcheck(size_t nparams, const unsigned int* params);
/* Make this explicit */
/*
* The "can_apply" callback returns positive a valid combination, zero for an
* invalid combination and negative for an error.
*/
static htri_t
H5Z_reg_can_apply(hid_t dcpl_id, hid_t type_id, hid_t space_id)
{
return 1; /* Assume it can always apply */
}
/*
As a filter, it is the identity function,
passing input to output unchanged.
*/
size_t
H5Z_filter_reg(unsigned int flags, size_t cd_nelmts,
const unsigned int cd_values[], size_t nbytes,
size_t *buf_size, void **buf)
{
void* newbuf;
if(cd_nelmts == 0)
goto fail;
if(!paramcheck(cd_nelmts,cd_values))
goto fail;
fprintf(stderr,"nbytes=%ld\n",(long)nbytes);
if (flags & H5Z_FLAG_REVERSE) {
/* Replace buffer */
#ifdef HAVE_H5ALLOCATE_MEMORY
newbuf = H5allocate_memory(*buf_size,0);
#else
newbuf = malloc(*buf_size);
#endif
if(newbuf == NULL) abort();
if(*buf != NULL) {
memcpy(newbuf,*buf,*buf_size);
/* reclaim old buffer */
#ifdef HAVE_H5FREE_MEMORY
H5free_memory(*buf);
#else
free(*buf);
#endif
}
*buf = newbuf;
} else {
/* Replace buffer */
#ifdef HAVE_H5ALLOCATE_MEMORY
newbuf = H5allocate_memory(*buf_size,0);
#else
newbuf = malloc(*buf_size);
#endif
if(newbuf == NULL) abort();
if(*buf != NULL) {
memcpy(newbuf,*buf,*buf_size);
/* reclaim old buffer */
#ifdef HAVE_H5FREE_MEMORY
H5free_memory(*buf);
#else
free(*buf);
#endif
}
*buf = newbuf;
}
return *buf_size;
fail:
return 0;
}
static int
paramcheck(size_t nparams, const unsigned int* params)
{
if(nparams != 1) {
fprintf(stderr,"Incorrect parameter count: need=1 sent=%ld\n",(unsigned long)nparams);
goto fail;
}
return 1;
fail:
return 0;
}
static const H5Z_class2_t H5Z_REG[1] = {{
H5Z_CLASS_T_VERS, /* H5Z_class_t version */
(H5Z_filter_t)(H5Z_FILTER_REG), /* Filter id number */
1, /* encoder_present flag (set to true) */
1, /* decoder_present flag (set to true) */
"registered", /* Filter name for debugging */
(H5Z_can_apply_func_t)H5Z_reg_can_apply, /* The "can apply" callback */
NULL, /* The "set local" callback */
(H5Z_func_t)H5Z_filter_reg, /* The actual filter function */
}};
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