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/*
Copyright 2018, UCAR/Unidata
See COPYRIGHT file for copying and redistribution conditions.
*/
/*! \file
Test support for multiple filters per variable
*/
#include "config.h"
#include <stdio.h>
#include <string.h>
#include <stdlib.h>
#include <hdf5.h>
#include "netcdf.h"
#include "netcdf_filter.h"
/* The HDF assigned id for bzip compression */
#define BZIP2_ID 307
/* The compression level used in this example */
#define BZIP2_LEVEL 9
#define DEFLATE_LEVEL 2
#define NOOP_ID 40000
#define NFILTERS 3
#define TESTFILE "multifilter.nc"
/* Point at which we give up */
#define MAXERRS 8
#define NDIMS 4
#define DIMSIZE 4
#define CHUNKSIZE 4 /* Note: not the total size of the chunk, but size wrt a dim*/
static size_t dimsize = DIMSIZE;
static size_t chunksize = CHUNKSIZE;
static size_t actualdims = NDIMS;
static size_t actualproduct = 1; /* x-product over dim sizes */
static size_t chunkproduct = 1; /* x-product over chunksizes */
static size_t dims[NDIMS];
static size_t chunks[NDIMS];
static int nerrs = 0;
static int ncid, varid;
static int dimids[NDIMS];
static float* array = NULL;
static float* expected = NULL;
/* Forward */
static void init(int argc, char** argv);
static int test_multi(void);
static int verifychunks(void);
#define ERRR do { \
fflush(stdout); /* Make sure our stdout is synced with stderr. */ \
fprintf(stderr, "Sorry! Unexpected result, %s, line: %d\n", \
__FILE__, __LINE__); \
nerrs++;\
} while (0)
static int
check(int err,int line)
{
if(err != NC_NOERR) {
fprintf(stderr,"fail (%d): %s\n",line,nc_strerror(err));
fflush(stderr);
exit(1);
}
return NC_NOERR;
}
#define CHECK(x) check(x,__LINE__)
/*
Read the chunking information about the variable
and verify that it is as expected.
*/
static int
verifychunks(void)
{
int i;
int store = -1;
size_t chunksizes[NDIMS];
memset(chunksizes,0,sizeof(chunksizes));
CHECK(nc_inq_var_chunking(ncid, varid, &store, chunksizes));
/* Storate must be chunked, not contiguous */
if(store != NC_CHUNKED) {
fprintf(stderr,"bad chunk store\n");
return NC_ESTORAGE;
}
/* Chunk sizes must match our predefined set */
for(i=0;i<actualdims;i++) {
if(chunksizes[i] != chunks[i]) {
fprintf(stderr,"bad chunk size: %d\n",i);
return NC_EBADCHUNK;
}
}
return 1;
}
/*
Compare the data we wrote against the data we read.
*/
static int
compare(void)
{
int errs = 0;
int i;
printf("data comparison: |array|=%lu\n",(unsigned long)actualproduct);
for(i=0;i<actualproduct;i++) {
if(expected[i] != array[i]) {
printf("mismatch: array[%d]=%f expected[%d]=%f\n",
i,array[i],i,expected[i]);
errs++;
if(errs >= MAXERRS)
break;
}
}
if(errs == 0)
printf("no data errors\n");
if(actualproduct <= 1)
return NC_EBADDIM;
return (errs == 0 ? NC_NOERR: NC_EINVAL);
}
int
verifyfilters(int ncid, int varid)
{
size_t nfilters, nparams;
unsigned int filterids[NFILTERS];
unsigned int params[2];
/* Read back the compression info and verify it */
CHECK(nc_inq_var_filterids(ncid,varid,&nfilters,filterids));
if(nfilters != NFILTERS) {
fprintf(stderr,"Fail: nfilters mismatch: expected=%d actual=%u\n",NFILTERS,(unsigned)nfilters);
return NC_EINVAL;
}
if(filterids[0] != BZIP2_ID
|| filterids[1] != H5Z_FILTER_DEFLATE
|| filterids[2] != NOOP_ID
) {
fprintf(stderr,"Fail: filter id mismatch: actual/expected={%u/%u,%u/%u,%u/%u}\n",
filterids[0],BZIP2_ID,
filterids[1],H5Z_FILTER_DEFLATE,
filterids[2],NOOP_ID);
return NC_EINVAL;
}
/* Get level for each filter */
CHECK(nc_inq_var_filter_info(ncid,varid,BZIP2_ID,&nparams,params));
if(nparams != 1) {
fprintf(stderr,"Fail: nparams mismatch: id=%u expected=1 actual=%u\n",filterids[0],(unsigned)nparams);
return NC_EINVAL;
}
if(params[0] != BZIP2_LEVEL) {
fprintf(stderr,"Fail: parameter mismatch: expected=%u actual=%u\n",BZIP2_LEVEL,params[0]);
return NC_EINVAL;
}
CHECK(nc_inq_var_filter_info(ncid,varid,H5Z_FILTER_DEFLATE,&nparams,params));
if(nparams != 1) {
fprintf(stderr,"Fail: nparams mismatch: id=%u expected=1 actual=%u\n",filterids[1],(unsigned)nparams);
return NC_EINVAL;
}
if(params[0] != DEFLATE_LEVEL) {
fprintf(stderr,"Fail: parameter mismatch: expected=%u actual=%u\n",BZIP2_LEVEL,params[0]);
return NC_EINVAL;
}
CHECK(nc_inq_var_filter_info(ncid,varid,NOOP_ID,&nparams,params));
if(nparams != 0) {
fprintf(stderr,"Fail: parameter mismatch: id=%u nparams: expected=0 actual=%u\n",NOOP_ID,(unsigned)nparams);
return NC_EINVAL;
}
return NC_NOERR;
}
/*
Create the file, write it, then re-read for comparison.
*/
static int
test_multi(void)
{
int i;
unsigned int params[2];
printf("\n*** Testing Multi-filter application: filter set = bzip2 deflate noop");
printf("\n");
/* Clear the data array */
memset(array,0,sizeof(float)*actualproduct);
/* Create a file */
CHECK(nc_create(TESTFILE, NC_NETCDF4|NC_CLOBBER, &ncid));
/* Do not use fill for this file */
CHECK(nc_set_fill(ncid, NC_NOFILL, NULL));
/* Define the dimensions */
for(i=0;i<actualdims;i++) {
char dimname[1024];
snprintf(dimname,sizeof(dimname),"dim%d",i);
CHECK(nc_def_dim(ncid, dimname, dims[i], &dimids[i]));
}
/* Define the variable */
CHECK(nc_def_var(ncid, "var", NC_FLOAT, actualdims, dimids, &varid));
/* Set chunking on the variable */
CHECK(nc_def_var_chunking(ncid,varid,NC_CHUNKED,chunks));
/* Verify that chunking succeeded */
if(!verifychunks())
return NC_EINVAL;
/* Set bzip2 compression for the variable: takes one parameter == level */
params[0] = BZIP2_LEVEL;
CHECK(nc_def_var_filter(ncid,varid,BZIP2_ID,1,params));
/* Set deflate (zip) compression for the variable: takes one parameter == level */
params[0] = DEFLATE_LEVEL;
CHECK(nc_def_var_filter(ncid,varid,H5Z_FILTER_DEFLATE,1,params));
/* Set noop) compression for the variable */
CHECK(nc_def_var_filter(ncid,varid,NOOP_ID,0,NULL));
/* Read back the compression info and verify it */
CHECK(verifyfilters(ncid,varid));
printf("filters verified\n");
/* Show chunking */
printf("show chunks:");
for(i=0;i<actualdims;i++)
printf("%s%u",(i==0?" chunks=":","),(unsigned)chunks[i]);
printf("\n");
/* prepare to write */
CHECK(nc_enddef(ncid));
/* Fill in the array */
for(i=0;i<actualproduct;i++)
expected[i] = (float)i;
/* write array */
CHECK(nc_put_var(ncid,varid,expected));
/* Close file */
CHECK(nc_close(ncid));
/* Now re-open and verify */
printf("\n*** Testing Multi-filters.\n");
/* Clear the data array */
memset(array,0,sizeof(float)*actualproduct);
/* Open the file */
CHECK(nc_open(TESTFILE, NC_NOWRITE, &ncid));
/* Get the variable id */
CHECK(nc_inq_varid(ncid, "var", &varid));
CHECK(verifyfilters(ncid,varid));
printf("filters verified\n");
/* Verify chunking */
if(!verifychunks())
return 0;
/* Read the data */
CHECK(nc_get_var_float(ncid, varid, array));
/* Close the file */
CHECK(nc_close(ncid));
return (compare() == NC_NOERR ? 0 : 1);
}
/**************************************************/
/* Utilities */
static void
init(int argc, char** argv)
{
int i;
/* Setup various variables */
actualproduct = 1;
chunkproduct = 1;
for(i=0;i<NDIMS;i++) {
dims[i] = dimsize;
chunks[i] = chunksize;
if(i < actualdims) {
actualproduct *= dims[i];
chunkproduct *= chunks[i];
}
}
/* Allocate max size */
array = (float*)calloc(1,sizeof(float)*actualproduct);
expected = (float*)calloc(1,sizeof(float)*actualproduct);
}
/**************************************************/
int
main(int argc, char **argv)
{
H5Eprint(stderr);
init(argc,argv);
if(test_multi() != NC_NOERR) ERRR;
exit(nerrs > 0?1:0);
}
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