1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228
|
#!/bin/bash
if test "x$srcdir" = x ; then srcdir=`pwd`; fi
. ../test_common.sh
set -e
# Which test cases to exercise
API=1
NG=1
NCP=1
NGC=1
MISC=1
MULTI=1
REP=1
ORDER=1
# Load the findplugins function
. ${builddir}/findplugin.sh
echo "findplugin.sh loaded"
# Function to remove selected -s attributes from file;
# These attributes might be platform dependent
sclean() {
cat $1 \
| sed -e '/:_IsNetcdf4/d' \
| sed -e '/:_Endianness/d' \
| sed -e '/_NCProperties/d' \
| sed -e '/_SuperblockVersion/d' \
| cat > $2
}
# Function to extract _Filter attribute from a file
# These attributes might be platform dependent
getfilterattr() {
sed -e '/var.*:_Filter/p' -ed <$1 >$2
}
trimleft() {
sed -e 's/[ ]*\([^ ].*\)/\1/' <$1 >$2
}
# Locate the plugin dir and the library names; argument order is critical
# Find bzip2 and capture
findplugin h5bzip2
BZIP2LIB="${HDF5_PLUGIN_LIB}"
BZIP2DIR="${HDF5_PLUGIN_DIR}/${BZIP2LIB}"
# Find misc and capture
findplugin h5misc
MISCDIR="${HDF5_PLUGIN_DIR}/${HDF5_PLUGIN_LIB}"
# Find noop and capture
findplugin h5noop
NOOPLIB="${HDF5_PLUGIN_LIB}"
NOOPDIR="${HDF5_PLUGIN_DIR}/${HDF5_PLUGIN_LIB}"
echo "final HDF5_PLUGIN_DIR=${HDF5_PLUGIN_DIR}"
export HDF5_PLUGIN_DIR
export HDF5_PLUGIN_PATH="$HDF5_PLUGIN_DIR"
# Verify
if ! test -f ${BZIP2DIR} ; then echo "Unable to locate ${BZIP2DIR}"; exit 1; fi
if ! test -f ${MISCDIR} ; then echo "Unable to locate ${MISCDIR}"; exit 1; fi
if ! test -f ${NOOPDIR} ; then echo "Unable to locate ${NOOPDIR}"; exit 1; fi
# See if we have szip
if avail szip; then HAVE_SZIP=1; else HAVE_SZIP=0; fi
# Execute the specified tests
if test "x$API" = x1 ; then
echo "*** Testing dynamic filters using API"
rm -f ./tmp_bzip2.nc ./tmp_bzip2.dump ./tmp_filter.txt
${execdir}/test_filter
${NCDUMP} -s -n bzip2 tmp_bzip2.nc > ./tmp_filter.txt
# Remove irrelevant -s output
sclean ./tmp_filter.txt ./tmp_bzip2.dump
diff -b -w ${srcdir}/bzip2.cdl ./tmp_bzip2.dump
echo "*** Pass: API dynamic filter"
fi
if test "x$MISC" = x1 ; then
echo
echo "*** Testing dynamic filters parameter passing"
rm -f ./tmp_misc.nc tmp_filter.txt tmp_filter2.txt
${execdir}/test_filter_misc
# Verify the parameters via ncdump
${NCDUMP} -s tmp_misc.nc > ./tmp_misc.txt
# Extract the parameters
getfilterattr ./tmp_misc.txt ./tmp_filter2.txt
rm -f ./tmp_misc.txt
trimleft ./tmp_filter2.txt ./tmp_filter.txt
rm -f ./tmp_filter2.txt
cat >./tmp_filter2.txt <<EOF
var:_Filter = "32768,3,239,23,65511,27,77,93,1145389056,3287505826,1097305129,1,2147483648,4294967295,4294967295" ;
EOF
diff -b -w ./tmp_filter.txt ./tmp_filter2.txt
echo "*** Pass: parameter passing"
fi
if test "x$NG" = x1 ; then
echo "*** Testing dynamic filters using ncgen"
rm -f ./tmp_bzip2.nc ./tmp_bzip2.dump ./tmp_filter.txt
${NCGEN} -lb -4 -o tmp_bzip2.nc ${srcdir}/bzip2.cdl
${NCDUMP} -s -n bzip2 tmp_bzip2.nc > ./tmp_filter.txt
# Remove irrelevant -s output
sclean ./tmp_filter.txt ./tmp_bzip2.dump
diff -b -w ${srcdir}/bzip2.cdl ./tmp_bzip2.dump
echo "*** Pass: ncgen dynamic filter"
fi
if test "x$NCP" = x1 ; then
echo "*** Testing dynamic filters using nccopy"
rm -f ./tmp_unfiltered.nc ./tmp_filtered.nc ./tmp.nc ./tmp_filtered.dump ./tmp_filter.txt
# Create our input test files
${NCGEN} -4 -lb -o tmp_unfiltered.nc ${srcdir}/ref_unfiltered.cdl
${NCGEN} -4 -lb -o tmp_unfilteredvv.nc ${srcdir}/ref_unfilteredvv.cdl
echo " *** Testing simple filter application"
${NCCOPY} -M0 -F "/g/var,307,9" tmp_unfiltered.nc tmp_filtered.nc
${NCDUMP} -s -n filtered tmp_filtered.nc > ./tmp_filter.txt
# Remove irrelevant -s output
sclean ./tmp_filter.txt ./tmp_filtered.dump
diff -b -w ${srcdir}/ref_filtered.cdl ./tmp_filtered.dump
echo " *** Pass: nccopy simple filter"
echo " *** Testing '*' filter application"
${NCCOPY} -M0 -F "*,307,9" tmp_unfilteredvv.nc tmp_filteredvv.nc
${NCDUMP} -s -n filteredvv tmp_filteredvv.nc > ./tmp_filtervv.txt
# Remove irrelevant -s output
sclean ./tmp_filtervv.txt ./tmp_filteredvv.dump
diff -b -w ${srcdir}/ref_filteredvv.cdl ./tmp_filteredvv.dump
echo " *** Pass: nccopy '*' filter"
echo " *** Testing 'v&v' filter application"
${NCCOPY} -M0 -F "var1&/g/var2,307,9" tmp_unfilteredvv.nc tmp_filteredvbar.nc
${NCDUMP} -n filteredvv -s tmp_filteredvbar.nc > ./tmp_filtervbar.txt
# Remove irrelevant -s output
sclean ./tmp_filtervbar.txt ./tmp_filteredvbar.dump
diff -b -w ${srcdir}/ref_filteredvv.cdl ./tmp_filteredvbar.dump
echo " *** Pass: nccopy 'v|v' filter"
echo " *** Testing pass-thru of filters"
rm -f ./tmp_filter.txt tmp_filter2.txt ./tmp_filter2.nc
# Prevent failure by allowing any chunk size
${NCCOPY} -M0 ./tmp_filtered.nc ./tmp_filter2.nc
${NCDUMP} -s tmp_filter2.nc > ./tmp_filter.txt
sed -e '/_Filter/p' -e d < ./tmp_filter.txt >tmp_filter2.txt
test -s tmp_filter2.txt
echo " *** Pass: pass-thru of filters"
echo " *** Testing -F none"
rm -f ./tmp_none.txt ./tmp_none2.txt ./tmp_none.nc
${NCCOPY} -M0 -F none ./tmp_filtered.nc ./tmp_none.nc
${NCDUMP} -hs tmp_none.nc > ./tmp_none.txt
sed -e '/_Filter/p' -e d < ./tmp_none.txt >./tmp_none2.txt
test ! -s tmp_none2.txt
echo " *** Pass: -F none"
echo " *** Testing -F var,none "
rm -f ./tmp_vnone.txt ./tmp_vnone.nc tmp_vnone2.txt
${NCCOPY} -M0 -F "/g/var,none" ./tmp_filtered.nc ./tmp_vnone.nc
${NCDUMP} -s tmp_vnone.nc > ./tmp_vnone.txt
sed -e '/_Filter/p' -e d < ./tmp_vnone.txt >tmp_vnone2.txt
test ! -s tmp_vnone2.txt
echo " *** Pass: -F var,none"
echo "*** Pass: all nccopy filter tests"
fi
if test "x$NGC" = x1 ; then
rm -f ./tmp_bzip2.c
echo "*** Testing dynamic filters using ncgen with -lc"
${NCGEN} -lc -4 ${srcdir}/bzip2.cdl > tmp_bzip2.c
diff -b -w ${srcdir}/ref_bzip2.c ./tmp_bzip2.c
echo "*** Pass: ncgen dynamic filter"
fi
if test "x$MULTI" = x1 ; then
echo "*** Testing multiple filters"
rm -f ./tmp_multifilter.nc ./tmp_multi.txt ./tmp_smulti.cdl
rm -f tmp_nccopyF.cdl tmp_nccopyF.nc tmp_ncgenF.cdl tmp_ncgenF.nc
${execdir}/tst_multifilter
${NCDUMP} -hsF -n multifilter tmp_multifilter.nc >./tmp_multi.cdl
# Remove irrelevant -s output
sclean ./tmp_multi.cdl ./tmp_smulti.cdl
diff -b -w ${srcdir}/ref_multi.cdl ./tmp_smulti.cdl
echo "*** nccopy -F with multiple filters"
if ! test -f tmp_unfiltered.nc ; then
${NCGEN} -4 -lb -o tmp_unfiltered.nc ${srcdir}/ref_unfiltered.cdl
fi
${NCCOPY} "-F/g/var,307,4|40000" tmp_unfiltered.nc tmp_nccopyF.nc
${NCDUMP} -hs -n nccopyF tmp_nccopyF.nc > ./tmp_nccopyF.cdl
sclean tmp_nccopyF.cdl tmp_nccopyFs.cdl
diff -b -w ${srcdir}/ref_nccopyF.cdl ./tmp_nccopyFs.cdl
echo "*** ncgen with multiple filters"
${NCGEN} -4 -lb -o tmp_ncgenF.nc ${srcdir}/ref_nccopyF.cdl
# Need to fix name using -n
${NCDUMP} -hsF -n nccopyF tmp_ncgenF.nc > ./tmp_ncgenF.cdl
sclean tmp_ncgenF.cdl tmp_ncgenFs.cdl
diff -b -w ${srcdir}/ref_nccopyF.cdl ./tmp_ncgenFs.cdl
echo "*** Pass: multiple filters"
fi
if test "x$REP" = x1 ; then
echo "*** Testing filter re-definition invocation"
rm -f tmp_filterrepeat.txt
${execdir}/test_filter_repeat >tmp_filterrepeat.txt
diff -b -w ${srcdir}/ref_filter_repeat.txt tmp_filterrepeat.txt
fi
if test "x$ORDER" = x1 ; then
echo "*** Testing multiple filter order of invocation on create"
rm -f tmp_crfilterorder.txt
${execdir}/test_filter_order create >tmp_crfilterorder.txt
diff -b -w ${srcdir}/ref_filter_order_create.txt tmp_crfilterorder.txt
echo "*** Testing multiple filter order of invocation on read"
rm -f tmp_rdfilterorder.txt
${execdir}/test_filter_order read >tmp_rdfilterorder.txt
diff -b -w ${srcdir}/ref_filter_order_read.txt tmp_rdfilterorder.txt
fi
# Cleanup
echo "*** Pass: all selected tests passed"
exit 0
|