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from netCDF4 import Dataset, __has_cdf5_format__
import numpy as np
import sys, os, unittest, tempfile
import struct
from numpy.testing import assert_array_equal
FILE_NAME = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name
dimsize = np.iinfo(np.int32).max*2 # only allowed in CDF5
ndim = 100
arrdata = np.random.randint(np.iinfo(np.uint8).min,np.iinfo(np.uint8).max,size=ndim)
@unittest.skipIf(not __has_cdf5_format__ or struct.calcsize("P") < 8, "no CDF5 support")
class test_cdf5(unittest.TestCase):
def setUp(self):
self.netcdf_file = FILE_NAME
nc = Dataset(self.netcdf_file,'w',format='NETCDF3_64BIT_DATA')
# create a 64-bit dimension
d = nc.createDimension('dim',dimsize) # 64-bit dimension
# create an 8-bit unsigned integer variable
v = nc.createVariable('var',np.uint8,'dim')
v[:ndim] = arrdata
# create a 64-bit integer attribute (issue #878)
nc.setncattr('int64_attr', np.int64(-9223372036854775806))
nc.close()
def tearDown(self):
# Remove the temporary files
os.remove(self.netcdf_file)
def runTest(self):
"""testing NETCDF3_64BIT_DATA format (CDF-5)"""
f = Dataset(self.netcdf_file, 'r')
assert f.dimensions['dim'].size == dimsize
assert_array_equal(arrdata, f.variables['var'][:ndim])
assert (type(f.int64_attr) == np.int64)
f.close()
if __name__ == '__main__':
unittest.main()
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