1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531
|
nipy (0.6.1-1) unstable; urgency=medium
* Team Upload
* New upstream version 0.6.1
* Remove obsolete patches, upstream has dropped Python2 support.
-- Alexandre Detiste <tchet@debian.org> Sun, 20 Oct 2024 17:34:34 +0200
nipy (0.6.0-2) unstable; urgency=medium
* gcc-14.patch: new: fix build failure with gcc 14. (Closes: #1075317)
* sympy-1.13.patch: new: fix test failures with sympy 1.13.
* d/control: declare compliance to standards version 4.7.0.
* d/rules: remove an extra license file.
* python3-shebang.patch: forwarded upstream.
* d/python3-nipy.lintian-overrides: new: flag non-docs in dist-packages.
-- Étienne Mollier <emollier@debian.org> Wed, 04 Sep 2024 14:48:01 +0200
nipy (0.6.0-1) unstable; urgency=medium
[ Andreas Tille ]
* Add alternatives
liblapack-dev | liblapack.so,
libblas-dev | libblas.so,
[ Komolehin Israel Timilehin ]
* Added autopkgtest
[ Étienne Mollier ]
* New upstream version (Closes: #1056693, #1056823)
* Remove trailing whitespace in debian/changelog (routine-update)
* sphinx-ext patch: delete: applied upstream.
* numpy-fix.patch: delete: issues fixed upstream.
* numpy1.24.patch: delete: applied upstream.
* nibabel5.0.0.patch: delete: applied upstream.
* nibabel5.1.0.patch: delete: issue fixed upstream.
* standard-gifty-support.patch: delete: fixed upstream.
* remove-imagefileerror.patch: delete: fixed upstream.
* python3-shebang.patch: new: ensure scripts run python3.
* d/rules: remove execute_before_dh_auto_build.
The numpy automated patching and the recompilation of cython objects
have become unneed.
* d/control: build depends on python3-mesonpy.
* d/rules: remove all tests overrides.
With the new system, pybuild is now capturing the test suite properly.
* d/control: tests depend on python3-transforms3d.
* d/rules: remove unexport of LDFLAGS.
The underlying issue with distutils is not current anymore.
* d/control: remove dependency on nose. (Closes: #1018423)
* d/rules: reinforce documentation building process.
* d/{control,rules}: migrate to dh-sequence-python3.
* d/t/control: tests depend on pytest.
* d/copyright: delete reference to removed file.
* d/copyright: bump upstream copyright year.
-- Étienne Mollier <emollier@debian.org> Sat, 30 Dec 2023 23:49:25 +0100
nipy (0.5.0-8) unstable; urgency=medium
[ Yaroslav Halchenko ]
* removed myself and Michael since we have not attended to this package for
awhile
[ Étienne Mollier ]
* nibabel5.0.0.patch: update following review upstream.
Thanks to Chris Markiewicz and Yaroslav Halchenko
* d/control: build depends on pybuild-plugin-pyproject.
* nibabel5.1.0.patch: new: resolve test failures.
These test failures are related to the introduction of the newer
nibabel version in Debian, which deprecates a couple of functions,
resulting in some build time test errors in nipy. (Closes: #1042053)
* standard-gifty-support.patch: new: fix gifti error.
* remove-imagefileerror.patch: new: remove obsolete import.
-- Étienne Mollier <emollier@debian.org> Thu, 17 Aug 2023 21:07:20 +0200
nipy (0.5.0-7) unstable; urgency=medium
* Team upload.
* d/control: build depends on python3-pytest.
* nibabel5.0.0.patch: add; fix unit test failure with nibabel 5.
(Closes: #1030138)
-- Étienne Mollier <emollier@debian.org> Tue, 31 Jan 2023 22:51:15 +0100
nipy (0.5.0-6) unstable; urgency=medium
[ Étienne Mollier ]
* d/control: add myself to uploaders.
* d/rules: dynamically patch numpy aliases.
[ Bas Couwenberg ]
* Add gbp.conf to use pristine-tar & --source-only-changes by default.
[ Étienne Mollier ]
* numpy1.24.patch: add; fix remaining test failure.
(Closes: #1027255, #1028778)
* d/copyright: bump copyright year.
* d/*.lintian-overrides: remove; unused overrides.
-- Étienne Mollier <emollier@debian.org> Sat, 14 Jan 2023 14:53:10 +0100
nipy (0.5.0-5) unstable; urgency=medium
* Team upload.
* d/rules: regenerate C source from .pyx with Cython. (Closes: #1024036)
* d/control: manpages unreadable currently, so disabled.
* d/control: bring back support to all python3 versions.
-- Étienne Mollier <emollier@debian.org> Thu, 05 Jan 2023 23:41:51 +0100
nipy (0.5.0-4) unstable; urgency=medium
* Team Upload.
* Add patch to fix FTBFS (Closes: #1026484)
* Bump SV to 4.6.2
-- Nilesh Patra <nilesh@debian.org> Wed, 21 Dec 2022 19:11:34 +0530
nipy (0.5.0-3) unstable; urgency=medium
* Team upload.
[ Andreas Tille ]
* Standards-Version: 4.6.1 (routine-update)
[ Étienne Mollier ]
* d/control: only support python3-dev (3.10) instead of python3-all-dev.
This buys some time while failure to build against Python 3.11
(see #1024036) is addressed upstream.
-- Étienne Mollier <emollier@debian.org> Tue, 15 Nov 2022 21:16:44 +0100
nipy (0.5.0-2) unstable; urgency=medium
* Team upload.
* Drop debug package
Closes: #994315
-- Andreas Tille <tille@debian.org> Wed, 22 Sep 2021 15:41:40 +0200
nipy (0.5.0-1) unstable; urgency=medium
[ Michael R. Crusoe ]
* Team upload.
* debian/patches: removed very old patches
cleaned up patch headers
* debian/watch: modernize to version 4
* debian/control: add Multi-Arch metadata as per the hinter
* Drop patches merged upstream.
* debian/rules: adjust path to scripts during the tests
[ Steffen Moeller ]
* Fix watchfile to detect new versions on github (routine-update)
[ Andreas Tille ]
* Standards-Version: 4.6.0 (routine-update)
-- Andreas Tille <tille@debian.org> Thu, 02 Sep 2021 21:37:24 +0200
nipy (0.4.3~rc1-1) unstable; urgency=medium
[ Andreas Tille ]
* Team upload.
* Resolve nipy autopkgtest failure due to numpy testing decorators
Closes: #959138
* Fix homepage (thanks to Drew Parsons)
Closes: #961846
* Standards-Version: 4.5.1 (routine-update)
* debhelper-compat 13 (routine-update)
* Add salsa-ci file (routine-update)
* watch file standard 4 (routine-update)
* Do not force maintainers to install Build-Depends on local machine
[ Yaroslav Halchenko ]
* debian/patches
+ 0001-BF-avoid-relying-on-Pythonic-casting-of-bool-into-nu.patch
for compatibility with sympy >= 1.6
* debian/rules
- exclude test_interpolator test for now, failing, reported upstream
https://github.com/nipy/nipy/issues/468
due to scipy jump from 1.5.4-1+b1 to 1.6.0-2
- exclude resample_outvalue for now, reported upstream
https://github.com/nipy/nipy/issues/471
-- Yaroslav Halchenko <debian@onerussian.com> Sat, 20 Feb 2021 02:57:19 -0500
nipy (0.4.2-3) unstable; urgency=medium
* Team upload.
* Move package to Debian Med team maintenance
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
* Remove obsolete field Name from debian/upstream/metadata (already
present in machine-readable debian/copyright).
* Use default git repository layout so debian/gbp.conf can be deleted
* Revert debhelper-compat 12 to 10 since Neurodebian maintainers
need this for backports
-- Andreas Tille <tille@debian.org> Wed, 19 Feb 2020 21:34:18 +0100
nipy (0.4.2-2.1) experimental; urgency=medium
[ Stuart Prescott ]
* Non-maintainer upload.
* Finish off Python 3 packaging work (Closes: #937143).
* Add Rules-Requires-Root: no.
* Update to debhelper-compat (= 12).
* Use packaged mathjax for documentation.
* Make building robust to multiple threads.
* Update Standards-Version to 4.5.0 (no changes required).
[ Andreas Tille ]
* Team upload.
* Point Vcs fields to Salsa
* Standards-Version: 4.3.0
* Testsuite: autopkgtest-pkg-python
* Secure URI in copyright format
* Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
* Remove trailing whitespace in debian/changelog
* Do not parse d/changelog
* Build-Depends: s/python-sphinx/python3-sphinx/
* remove outdated debian/pycompat
* Use pybuild
[ Michael R. Crusoe ]
* Switch to Python 3 only package.
-- Stuart Prescott <stuart@debian.org> Fri, 31 Jan 2020 18:09:16 +1100
nipy (0.4.2-2) unstable; urgency=medium
* Cherry picked a number of fixes from upstream/PRs to become a part of the
next release (Closes: #906388)
* debian/control
- fixed up Vcs fields to point to salsa
-- Yaroslav Halchenko <debian@onerussian.com> Thu, 10 Jan 2019 11:05:31 -0500
nipy (0.4.2-1) unstable; urgency=medium
* Fresh upstream release
* debian/patches
- dropped changesets - upstreamed
- deb_no_ipython_console_highlight for now to not require that sphinx
extension
-- Yaroslav Halchenko <debian@onerussian.com> Mon, 19 Feb 2018 11:06:56 -0500
nipy (0.4.1-2) unstable; urgency=medium
* Boost statement of policy compliance to 4.1.2
* Boost debhelper compat from 7 to 9
- $@ should come before the options (like --buildsystem=python_distutils)
* debian/patches
- picked up few patches from upstream to avoid infinite recursion in sympy
-- Yaroslav Halchenko <debian@onerussian.com> Mon, 18 Dec 2017 10:01:44 -0500
nipy (0.4.1-1) unstable; urgency=medium
* Fresh upstream release
- should resolve some failing tests (Closes: #848745)
- dropping absorbed changeset* patches
-- Yaroslav Halchenko <debian@onerussian.com> Sun, 30 Jul 2017 21:20:58 -0400
nipy (0.4.0+git26-gf8d3149-2) unstable; urgency=medium
* debian/pathes picked up few fixes from upstream adjusting
some tests for compatibility
- 78ced182c4b4583c9a2ed3c1fc01764941560c72
TST: relax test precision a little for 32-bit
(replaces "custom" up_relax_assumption patch)
- 32cb61eab2e92525c2497294d3be40e361507c4e (fixed failing doctest)
- 751531a2894e69383f75e6a9b97586e74759ab1b
BF: allow for generic IOError-based exception to be thrown when
loading non existing file (Closes: #836538)
* .gitignore, debian/source/options
- to not ignore .diff files since interfers with helper to CP
them from upstream
-- Yaroslav Halchenko <debian@onerussian.com> Sun, 04 Sep 2016 10:18:55 -0400
nipy (0.4.0+git26-gf8d3149-1) unstable; urgency=medium
* New upstream snapshot from 0.4.0-26-gf8d3149
- various compatibility fixes (Closes: #816983)
* debian/rules
- fixed up PATH/invocation of scripts so that manpages generate and
tests pass
-- Yaroslav Halchenko <debian@onerussian.com> Wed, 03 Aug 2016 22:54:08 -0400
nipy (0.3.0+git262-gbb838d7-1) unstable; urgency=medium
* New upstream snapshot from 0.3.0-261-ge34a388
* debian/patches
- deb_use_internal_ipythonsphinx_extensions -- dropped, upstream uses
sphinx's copy now
* debian/upstream moved into debian/upstream/metadata
* debian/{control,rules}
- use libjs-underscore for underscore.js
-- Yaroslav Halchenko <debian@onerussian.com> Fri, 03 Oct 2014 16:50:34 -0400
nipy (0.3.0-2) UNRELEASED; urgency=medium
* debian/patches
- deb_use_internal_ipythonsphinx_extensions to use sphinx-provided
inheritance_diagram (Closes: #706532)
- up_relax_assertion - relax assertion to almost_equal, permittable
(Closes: #729594)
* debian/{control,rules}
- switch away from pysupport
- policy boost to 3.9.6
-- Yaroslav Halchenko <debian@onerussian.com> Fri, 03 Oct 2014 08:30:13 -0400
nipy (0.3.0-1) unstable; urgency=low
* New upstream release
* debian/watch
- fixed up for the recent github changes
* debian/rules
- add scripts/ into PATH while testing and building documentation
- generate manpages for the scripts
-- Yaroslav Halchenko <debian@onerussian.com> Sun, 03 Feb 2013 11:36:54 -0500
nipy (0.2.0-1) unstable; urgency=low
* New upstream release: documentation and example improvements and
functionality fixes since rc2.
* Updated debian/patches/lucid-dsc-patch-nodoc to build no -doc package
on older releases
-- Yaroslav Halchenko <debian@onerussian.com> Sun, 22 Jul 2012 10:50:06 -0400
nipy (0.2.0~rc2+git27-g7b9b5a5-1) unstable; urgency=low
* New upstream pre-release snapshot from origin/master at
0.2.0rc2-27-g7b9b5a5
-- Yaroslav Halchenko <debian@onerussian.com> Sat, 30 Jun 2012 00:02:45 -0400
nipy (0.2.0~rc2-1) unstable; urgency=low
* Fresh RC (Closes: #673489)
- addresses python 2.5 compatibility
* debian/watch
- added to fetch from github tags
-- Yaroslav Halchenko <debian@onerussian.com> Tue, 19 Jun 2012 21:03:28 -0400
nipy (0.2.0~rc1+git170-g5d2dc33-1) unstable; urgency=low
* Yet another development release snapshot not intended for public
- based on current master 6fc3af4
with pull requests #171 and #183 merged
* Boosted policy compliance to 3.9.3 -- no changes
* debian/copyright: removed obsolete entries, adjusted for DEP5
-- Yaroslav Halchenko <debian@onerussian.com> Sat, 12 May 2012 22:19:00 -0400
nipy (0.2.0~rc1-1) experimental; urgency=low
* Release candidate
* Add epoch to versioned depends on numpy (Closes: #658372)
(Thanks Jakub Wilk for the report and patch)
-- Yaroslav Halchenko <debian@onerussian.com> Mon, 30 Apr 2012 11:36:17 -0400
nipy (0.1.999-2) unstable; urgency=low
* Recommend sympy (thanks Chris Filo Gorgolewski for the report)
* Respect PYTHONPATH while running tests
-- Yaroslav Halchenko <debian@onerussian.com> Sun, 12 Feb 2012 10:59:44 -0500
nipy (0.1.999-1) unstable; urgency=low
* Alpha release in preparation for upcoming 0.2.0 release (Closes: #581394)
* No changes within upstream codebase (Closes: #643225)
* Do not unittest if nocheck is provided (Closes: #649620)
* Boosted policy compliance to 3.9.2 -- no changes
* Patch lucid-dsc-patch-nodoc to avoid trying to build -doc on lucid
due to the failure to install needed build-depends
-- Yaroslav Halchenko <debian@onerussian.com> Sun, 27 Nov 2011 22:06:21 -0500
nipy (0.1.2+201100720-2) unstable; urgency=low
* Merged commits from upstream contributed by Matthew Brett to fix failing
unittests on big-endians. Current upstream point:
upstream/0.1.2+20110404-74-g698b432
-- Yaroslav Halchenko <debian@onerussian.com> Sat, 23 Jul 2011 22:34:15 -0400
nipy (0.1.2+201100720-1) unstable; urgency=low
* Fresh upstream snapshot: 2c11ae604762105a4adaa46c57e95dc1998485eb
- might address FTBFS due to tests on some architectures
-- Yaroslav Halchenko <debian@onerussian.com> Wed, 20 Jul 2011 10:01:30 -0400
nipy (0.1.2+20110404-1) unstable; urgency=low
* Fresh upstream snapshot: c213cc2421686b5485e43db54ec2ac8a5fa06ea6
- Relies on external nibabel module instead of internal outdated
copy. Should close 611316, which would be done upon successfull
build across the architectures.
- Does not use PyNIfTI any longer, so it is removed from *Depends
now
- Absorbed all Debian patches
* No cdbs was used since nearly a year ago -- removed it from Build-Depends
-- Yaroslav Halchenko <debian@onerussian.com> Mon, 04 Apr 2011 09:54:56 -0400
nipy (0.1.2+20110114-1) unstable; urgency=low
* Fresh upstream snapshot: 136acf09beff315226e4cfa07066b1f5998e9d5e
* Carries numpydoc compatible with sphinx >= 1.0 (Closes: #588625)
* Do not compress objects.inv necessary for intersphinx (Closes: #608763)
* Added few patches (submitted upstream) to fix building of documentation
- 0001-make-few-classes-new-style-derive-from-object.patch
- 0002-make-classes-without-new-style-derive-from-object.patch
- 0003-import-similarity_measures-as-_sms-in-histogram_regi.patch
* Adjusted debian/rules:
- run unittests now against default python version
on the installed version of nipy. Skipped unittests due to known
failures or non-labile tests subject to random data:
test_slice_from_3d, test_screen, test_lips3_disjoint, test_mu2tet,
test_input_effects, test_same_basis, test_fullrank, test_ec,
test_apply_affine, test_lips1_disjoint, test_dtrsm
- assure Agg matplotlib backend during documentation build and unittests
* Added *-dsc-patch-nodbg backport-dsc patches to avoid building of -dbg
package since python-scipy-dbg is missing on lenny or ubuntu releases
prior maverick (not sufficient anyways due to other missing versioned
build-dependencies atm -- matplotlib, sympy)
* Versioned Build-Dependency sympy >= 0.6.6
-- Yaroslav Halchenko <debian@onerussian.com> Fri, 14 Jan 2011 19:33:28 -0500
nipy (0.1.2+20101206-1) UNRELEASED; urgency=low
* Fresh upstream snapshot: a0fd6c6c62d91315cdeb8bc81e19f355b12f8013
Never officially released, thus changelogs moved upstairs
-- Yaroslav Halchenko <debian@onerussian.com> Thu, 13 Jan 2011 21:02:35 -0500
nipy (0.1.2+20100526-2) unstable; urgency=medium
* Strict version dependency on NumPy to assure ABI compatibility in the
future (Closes: #590737). Thanks Kumar Appaiah for the reminder.
* debian/copyright:
- Added missing copyrights/licenses
- Adjusted formatting to match DEP5 rev 135
- Citing BSD-3 license verbatim to be compliant with 3.9.0
* Boosted policy compliance to 3.9.1 (BSD-3 license verbatim)
* Medium urgency for faster propagation of RC bug fix into squeeze
* Added gbp.conf file for easy building using g-b-p
-- Yaroslav Halchenko <debian@onerussian.com> Fri, 06 Aug 2010 11:17:05 -0400
nipy (0.1.2+20100526-1) unstable; urgency=low
* Fresh upstream snapshot -- needed a new orig.tar.gz since some
files were moved/removed
* Switching to dh from cdbs:
- Assure no documentation is built during binary-arch builds
(closes: #581204, #581783)
- Build for all supported Python versions
- Expanded Build-Depends with all necessary -dbg packages
(e.g. cython-dbg, python-all-dbg)
- Added dvipng into Build-Depends for avoiding problems during
documentation build
-- Yaroslav Halchenko <debian@onerussian.com> Tue, 11 May 2010 21:17:20 -0400
nipy (0.1.2+20100505-1) unstable; urgency=low
* Fresh upstream snapshot (Closes: #577898). Switching from bzr rev to
git dated versioning for nipy for now
* Debian packaging moved to be on top of a newly created
git repository for nipy upstream
* Adhering to a new deb source format 3.0 (quilt)
* Policy compliance to 3.8.4 (no changes due)
* Switching over to NeuroDebian team
* -doc: no pdf's for Documentation (removed texlive,
texlive-latex-extra from Build-Depends) (Closes: #567757)
* Confirming (and refactoring) NMUs from Kumar (THANKS!):
+ As promised, closing the issue with absent i386 builds (Closes: #562246)
+ Adding both PATH= and MPLCONFIGDIR= for building docs
+ Addressed fortran binding issue with patchless solution:
unexport of LDFLAGS in debian/rules which brings -shared back
to game (see #535699 for more information)
-- Yaroslav Halchenko <debian@onerussian.com> Tue, 04 May 2010 23:01:12 -0400
nipy (0.1.2+1741-2.2) unstable; urgency=low
* Non-maintainer upload.
* Use $(CURDIR) instead of $(PWD) in debian/rules. (Closes: #535699)
-- Kumar Appaiah <akumar@debian.org> Sun, 31 Jan 2010 08:40:11 -0600
nipy (0.1.2+1741-2.1) unstable; urgency=medium
* Non-maintainer upload.
* Fix "FTBFS: Tries to write to $HOME during build" using Peter Green's
patch.
* In addition, make package buildable by hacking the build system to use
-shared and -lpython<ver> for all gfortran using modules. (Closes:
#535699)
-- Kumar Appaiah <akumar@debian.org> Sun, 31 Jan 2010 00:40:11 -0600
nipy (0.1.2+1741-2) unstable; urgency=low
* Adjusted long descriptions to follow the guidelines and to become
complete sentences with redundant prefixes (closes: #532860)
-- Yaroslav Halchenko <debian@onerussian.com> Fri, 12 Jun 2009 16:56:54 -0400
nipy (0.1.2+1741-1) unstable; urgency=low
* Initial release (Closes: #522353)
-- Experimental Psychology Maintainers <pkg-exppsy-maintainers@lists.alioth.debian.org> Tue, 14 Apr 2009 18:21:44 -0400
|