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/*************************************************************************
* Copyright (C) 2018-2022 Blue Brain Project
*
* This file is part of NMODL distributed under the terms of the GNU
* Lesser General Public License. See top-level LICENSE file for details.
*************************************************************************/
#include <catch2/catch_session.hpp>
#include <catch2/catch_test_macros.hpp>
#include "ast/binary_expression.hpp"
#include "ast/program.hpp"
#include "parser/nmodl_driver.hpp"
#include "test/unit/utils/test_utils.hpp"
#include "visitors/checkparent_visitor.hpp"
#include "visitors/defuse_analyze_visitor.hpp"
#include "visitors/inline_visitor.hpp"
#include "visitors/symtab_visitor.hpp"
using namespace nmodl;
using namespace visitor;
using namespace test;
using namespace test_utils;
using ast::AstNodeType;
using nmodl::parser::NmodlDriver;
//=============================================================================
// DefUseAnalyze visitor tests
//=============================================================================
std::vector<DUChain> run_defuse_visitor(const std::string& text, const std::string& variable) {
NmodlDriver driver;
const auto& ast = driver.parse_string(text);
SymtabVisitor().visit_program(*ast);
InlineVisitor().visit_program(*ast);
std::vector<DUChain> chains;
DefUseAnalyzeVisitor v(*ast->get_symbol_table());
/// analyse only derivative blocks in this test
const auto& blocks = nmodl::collect_nodes(*ast, {AstNodeType::DERIVATIVE_BLOCK});
chains.reserve(blocks.size());
for (const auto& block: blocks) {
chains.push_back(v.analyze(*block, variable));
}
// check that, after visitor rearrangement, parents are still up-to-date
CheckParentVisitor().check_ast(*ast);
return chains;
}
SCENARIO("Perform DefUse analysis on NMODL constructs") {
GIVEN("global variable usage in assignment statements") {
std::string nmodl_text = R"(
NEURON {
RANGE tau, beta
}
DERIVATIVE states {
tau = 1
tau = 1 + tau
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"name":"D"},{"name":"U"},{"name":"D"}]})";
THEN("Def-Use chains for individual usage is printed") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string(true) == expected_text);
REQUIRE(chains[0].eval() == DUState::D);
REQUIRE(to_nmodl(*chains[0].chain[0].binary_expression) == "tau = 1");
REQUIRE(to_nmodl(*chains[0].chain[1].binary_expression) == "tau = 1+tau");
REQUIRE(to_nmodl(*chains[0].chain[2].binary_expression) == "tau = 1+tau");
}
}
GIVEN("block with use of verbatim block") {
std::string nmodl_text = R"(
NEURON {
RANGE tau, beta
}
DERIVATIVE states {
VERBATIM ENDVERBATIM
tau = 1
VERBATIM ENDVERBATIM
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"name":"U"},{"name":"D"},{"name":"U"}]})";
THEN("Verbatim block is considered as use of the variable") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string(true) == expected_text);
REQUIRE(chains[0].eval() == DUState::U);
REQUIRE(chains[0].chain[0].binary_expression == nullptr); // verbatim begin
REQUIRE(to_nmodl(*chains[0].chain[1].binary_expression) == "tau = 1");
REQUIRE(chains[0].chain[2].binary_expression == nullptr); // verbatim end
}
}
GIVEN("use of array variables") {
std::string nmodl_text = R"(
DEFINE N 3
STATE {
m[N]
h[N]
n[N]
o[N]
}
DERIVATIVE states {
LOCAL tau[N]
tau[0] = 1 : tau[0] is defined
tau[2] = 1 + tau[1] + tau[2] : tau[1] is used; tau[2] is defined as well as used
m[0] = m[1] : m[0] is defined and used on next line; m[1] is used
h[1] = m[0] + h[0] : h[0] is used; h[1] is defined
o[i] = 1 : o[i] is defined for any i
n[i+1] = 1 + n[i] : n[i] is used as well as defined for any i
}
)";
THEN("Def-Use analyser distinguishes variables by array index") {
std::string input = reindent_text(nmodl_text);
{
auto m0 = run_defuse_visitor(input, "m[0]");
auto m1 = run_defuse_visitor(input, "m[1]");
auto h1 = run_defuse_visitor(input, "h[1]");
auto tau0 = run_defuse_visitor(input, "tau[0]");
auto tau1 = run_defuse_visitor(input, "tau[1]");
auto tau2 = run_defuse_visitor(input, "tau[2]");
auto n0 = run_defuse_visitor(input, "n[0]");
auto n1 = run_defuse_visitor(input, "n[1]");
auto o0 = run_defuse_visitor(input, "o[0]");
REQUIRE(m0[0].to_string() == R"({"DerivativeBlock":[{"name":"D"},{"name":"U"}]})");
REQUIRE(to_nmodl(*m0[0].chain[0].binary_expression) == "m[0] = m[1]");
REQUIRE(to_nmodl(*m0[0].chain[1].binary_expression) == "h[1] = m[0]+h[0]");
REQUIRE(m1[0].to_string() == R"({"DerivativeBlock":[{"name":"U"}]})");
REQUIRE(to_nmodl(*m1[0].chain[0].binary_expression) == "m[0] = m[1]");
REQUIRE(h1[0].to_string() == R"({"DerivativeBlock":[{"name":"D"}]})");
REQUIRE(to_nmodl(*h1[0].chain[0].binary_expression) == "h[1] = m[0]+h[0]");
REQUIRE(tau0[0].to_string() == R"({"DerivativeBlock":[{"name":"LD"}]})");
REQUIRE(to_nmodl(*tau0[0].chain[0].binary_expression) == "tau[0] = 1");
REQUIRE(tau1[0].to_string() == R"({"DerivativeBlock":[{"name":"LU"}]})");
REQUIRE(to_nmodl(*tau1[0].chain[0].binary_expression) ==
"tau[2] = 1+tau[1]+tau[2]");
REQUIRE(tau2[0].to_string() ==
R"({"DerivativeBlock":[{"name":"LU"},{"name":"LD"}]})");
REQUIRE(to_nmodl(*tau2[0].chain[0].binary_expression) ==
"tau[2] = 1+tau[1]+tau[2]");
REQUIRE(to_nmodl(*tau2[0].chain[1].binary_expression) ==
"tau[2] = 1+tau[1]+tau[2]");
REQUIRE(n0[0].to_string() == R"({"DerivativeBlock":[{"name":"U"},{"name":"D"}]})");
REQUIRE(to_nmodl(*n0[0].chain[0].binary_expression) == "n[i+1] = 1+n[i]");
REQUIRE(to_nmodl(*n0[0].chain[1].binary_expression) == "n[i+1] = 1+n[i]");
REQUIRE(n1[0].to_string() == R"({"DerivativeBlock":[{"name":"U"},{"name":"D"}]})");
REQUIRE(to_nmodl(*n1[0].chain[0].binary_expression) == "n[i+1] = 1+n[i]");
REQUIRE(to_nmodl(*n1[0].chain[1].binary_expression) == "n[i+1] = 1+n[i]");
REQUIRE(o0[0].to_string() == R"({"DerivativeBlock":[{"name":"D"}]})");
REQUIRE(to_nmodl(*o0[0].chain[0].binary_expression) == "o[i] = 1");
}
}
}
GIVEN("global variable used in if statement (lhs)") {
std::string nmodl_text = R"(
NEURON {
RANGE tau
}
DERIVATIVE states {
IF (tau == 0) {
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"U"}]}]}]})";
THEN("tau is used") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::U);
REQUIRE(chains[0].chain[0].binary_expression == nullptr);
REQUIRE(chains[0].chain[0].children[0].binary_expression == nullptr);
REQUIRE(to_nmodl(*chains[0].chain[0].children[0].children[0].binary_expression) ==
"tau == 0");
}
}
GIVEN("global variable used in if statement (rhs)") {
std::string nmodl_text = R"(
NEURON {
RANGE tau
}
DERIVATIVE states {
IF (0 == tau) {
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"U"}]}]}]})";
THEN("tau is used") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::U);
REQUIRE(chains[0].chain[0].binary_expression == nullptr);
REQUIRE(chains[0].chain[0].children[0].binary_expression == nullptr);
REQUIRE(to_nmodl(*chains[0].chain[0].children[0].children[0].binary_expression) ==
"0 == tau");
}
}
GIVEN("global variable definition in else block") {
std::string nmodl_text = R"(
NEURON {
RANGE tau, beta
}
DERIVATIVE states {
IF (1) {
LOCAL tau
tau = 1
} ELSE {
tau = 1
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"LD"}]},{"ELSE":[{"name":"D"}]}]}]})";
THEN("Def-Use chains should return CD") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::CD);
}
}
GIVEN("global variable use in if statement + definition and use in if and else blocks") {
std::string nmodl_text = R"(
NEURON {
RANGE tau
}
DERIVATIVE states {
IF (tau == 0) {
tau = 1 + tau
} ELSE {
tau = 2 + tau
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"U"},{"name":"U"},{"name":"D"}]},{"ELSE":[{"name":"U"},{"name":"D"}]}]}]})";
THEN("tau is used and then used in its definitions") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].chain[0].binary_expression == nullptr); // CONDITIONAL_BLOCK
REQUIRE(chains[0].chain[0].children[0].binary_expression == nullptr); // IF
REQUIRE(to_nmodl(*chains[0].chain[0].children[0].children[0].binary_expression) ==
"tau == 0");
REQUIRE(to_nmodl(*chains[0].chain[0].children[0].children[1].binary_expression) ==
"tau = 1+tau");
REQUIRE(to_nmodl(*chains[0].chain[0].children[0].children[2].binary_expression) ==
"tau = 1+tau");
REQUIRE(chains[0].chain[0].children[1].binary_expression == nullptr); // ELSE
REQUIRE(to_nmodl(*chains[0].chain[0].children[1].children[0].binary_expression) ==
"tau = 2+tau");
REQUIRE(to_nmodl(*chains[0].chain[0].children[1].children[1].binary_expression) ==
"tau = 2+tau");
}
}
GIVEN("global variable usage in else block") {
std::string nmodl_text = R"(
NEURON {
RANGE tau, beta
}
DERIVATIVE states {
IF (1) {
} ELSE {
tau = 1 + tau
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"name":"IF"},{"ELSE":[{"name":"U"},{"name":"D"}]}]}]})";
THEN("Def-Use chains should return USE") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::U);
}
}
GIVEN("local variable usage in else block") {
std::string nmodl_text = R"(
NEURON {
RANGE tau
}
DERIVATIVE states {
IF (tau == 1) {
} ELSE {
LOCAL tau
tau = 1 + tau
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"U"}]},{"ELSE":[{"name":"LU"},{"name":"LD"}]}]}]})";
THEN("Def-Use chains should return USE because global variables have precedence in eval") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::U);
}
}
GIVEN("local variable conditional definition") {
std::string nmodl_text = R"(
NEURON {
RANGE beta
}
DERIVATIVE states {
LOCAL tau
IF (beta == 0) {
tau = 1
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"LD"}]}]}]})";
THEN("Def-Use chains should return USE because global variables have precedence in eval") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::CD);
}
}
GIVEN("local and range variables usage and definitions") {
std::string nmodl_text = R"(
NEURON {
RANGE beta
}
DERIVATIVE states {
LOCAL tau
IF (beta == 0) {
tau = 1
} ELSE {
beta = 0
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"name":"IF"},{"name":"ELSE"}]}]})";
THEN(
"Def-Use chains should return NONE because the variable we look for is not one of "
"them") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "alpha");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::NONE);
}
}
GIVEN("Simple check of local and global variables") {
std::string nmodl_text = R"(
NEURON {
GLOBAL x
}
DERIVATIVE states {
LOCAL a, b
a = 1
IF (x == 1) {
LOCAL c
c = 1
}
}
)";
std::string expected_text_x =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"U"}]}]}]})";
std::string expected_text_a =
R"({"DerivativeBlock":[{"name":"LD"},{"CONDITIONAL_BLOCK":[{"name":"IF"}]}]})";
std::string expected_text_b =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"name":"IF"}]}]})";
std::string expected_text_c =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"LD"}]}]}]})";
THEN("local and global variables are correctly analyzed") {
std::string input = reindent_text(nmodl_text);
auto chains_x = run_defuse_visitor(input, "x");
// Global variable "x" should be U as it's only used in the IF-ELSE statement
REQUIRE(chains_x[0].to_string() == expected_text_x);
REQUIRE(chains_x[0].eval() == DUState::U);
auto chains_a = run_defuse_visitor(input, "a");
// Local variable "a" should be LD as it's local and defined
REQUIRE(chains_a[0].to_string() == expected_text_a);
REQUIRE(chains_a[0].eval() == DUState::LD);
auto chains_b = run_defuse_visitor(input, "b");
// Local variable "b" should be NONE as it's not used
REQUIRE(chains_b[0].to_string() == expected_text_b);
REQUIRE(chains_b[0].eval() == DUState::NONE);
auto chains_c = run_defuse_visitor(input, "c");
// Local variable "c" should be CD as it's conditionally defined
REQUIRE(chains_c[0].to_string() == expected_text_c);
REQUIRE(chains_c[0].eval() == DUState::CD);
}
}
GIVEN("global variable definition in if-else block") {
std::string nmodl_text = R"(
NEURON {
RANGE tau
}
DERIVATIVE states {
IF (1) {
tau = 11.1
exp(tau)
} ELSE {
tau = 1
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"D"},{"name":"U"}]},{"ELSE":[{"name":"D"}]}]}]})";
THEN("Def-Use chains should return DEF") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::D);
}
}
GIVEN("conditional definition in nested block") {
std::string nmodl_text = R"(
NEURON {
RANGE tau, beta
}
DERIVATIVE states {
IF (1) {
IF(11) {
tau = 11.1
exp(tau)
}
} ELSE IF(1) {
tau = 1
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"D"},{"name":"U"}]}]}]},{"ELSEIF":[{"name":"D"}]}]}]})";
THEN("Def-Use chains should return DEF") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::CD);
}
}
GIVEN("global variable usage in if-elseif-else block") {
std::string nmodl_text = R"(
NEURON {
RANGE tau, beta
}
DERIVATIVE states {
IF (1) {
tau = 1
}
tau = 1 + tau
IF (0) {
beta = 1
} ELSE IF (2) {
tau = 1
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"D"}]}]},{"name":"U"},{"name":"D"},{"CONDITIONAL_BLOCK":[{"name":"IF"},{"ELSEIF":[{"name":"D"}]}]}]})";
THEN("Def-Use chains for individual usage is printed") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::U);
}
}
GIVEN("global variable used in nested if-elseif-else block") {
std::string nmodl_text = R"(
NEURON {
RANGE tau, beta
}
DERIVATIVE states {
IF (1) {
LOCAL tau
tau = 1
}
IF (0) {
IF (1) {
beta = 1
} ELSE {
tau = 1
}
} ELSE IF (2) {
IF (1) {
beta = 1
IF (0) {
} ELSE {
beta = 1 + exp(tau)
}
}
tau = 1
}
}
)";
std::string expected_text =
R"({"DerivativeBlock":[{"CONDITIONAL_BLOCK":[{"IF":[{"name":"LD"}]}]},{"CONDITIONAL_BLOCK":[{"IF":[{"CONDITIONAL_BLOCK":[{"name":"IF"},{"ELSE":[{"name":"D"}]}]}]},{"ELSEIF":[{"CONDITIONAL_BLOCK":[{"IF":[{"CONDITIONAL_BLOCK":[{"name":"IF"},{"ELSE":[{"name":"U"}]}]}]}]},{"name":"D"}]}]}]})";
THEN("Def-Use chains for nested statements calculated") {
std::string input = reindent_text(nmodl_text);
auto chains = run_defuse_visitor(input, "tau");
REQUIRE(chains[0].to_string() == expected_text);
REQUIRE(chains[0].eval() == DUState::U);
}
}
}
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