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|
name: Tests
on: [push, pull_request]
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
build:
runs-on: ${{ matrix.platform }}
strategy:
fail-fast: false
matrix:
python-version: ["3.11", "3.12", "3.13", "3.14"]
# macos-13 is an intel runner, macos-14 is an arm64 runner
platform: [ubuntu-latest, ubuntu-22.04-arm, windows-latest, macos-13, macos-14]
defaults:
run:
shell: bash -el {0}
steps:
- name: Checkout source
uses: actions/checkout@v5
with:
submodules: recursive
fetch-depth: 0 # required for version resolution
- name: Set up Conda
uses: conda-incubator/setup-miniconda@v3.2.0
with:
channels: conda-forge
miniforge-version: latest
python-version: ${{ matrix.python-version }}
- name: Install compilers
run: conda install -y c-compiler cxx-compiler
- name: Install clang
if: matrix.platform == 'macos-13'
run: conda install -y 'clang>=12.0.1,<17'
- name: Show conda environment info
run: |
conda info
conda config --show-sources
conda list --show-channel-urls
- name: Install numcodecs
run: |
export DISABLE_NUMCODECS_AVX2=""
# TODO: Remove this conditional when pcodec supports Python 3.14
if [[ "${{ matrix.python-version }}" == "3.14" ]]; then
python -m pip install -v -e .[test,test_extras,msgpack,google_crc32c,crc32c,zfpy]
else
python -m pip install -v -e .[test,test_extras,msgpack,google_crc32c,crc32c,pcodec,zfpy]
fi
- name: List installed packages
run: python -m pip list
- name: Run tests
shell: "bash -l {0}"
run: pytest -v
- uses: codecov/codecov-action@v5
with:
fail_ci_if_error: true
token: ${{ secrets.CODECOV_TOKEN }}
verbose: true
test-zarr:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
zarr-version: ["312", "313", "main"]
defaults:
run:
shell: bash -el {0}
steps:
- name: Checkout source
uses: actions/checkout@v5
with:
submodules: recursive
fetch-depth: 0 # required for version resolution
- name: Set up Pixi
uses: prefix-dev/setup-pixi@v0.9.0
with:
pixi-version: v0.49.0
cache: false
- name: List installed packages
shell: "bash -l {0}"
run: pixi run ls-deps-${{matrix.zarr-version}}
- name: Run tests with Zarr ${{ matrix.zarr-version }}
shell: "bash -l {0}"
run: pixi run test-zarr-${{ matrix.zarr-version }}
|
