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Options to specify output format
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.. program:: obitools
Standard output format
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.. cmdoption:: --fasta-output
Output sequences in ``OBITools`` :doc:`fasta <../fasta>` format
.. cmdoption:: --fastq-output
Output sequences in Sanger :doc:`fastq <../fastq>` format
Generating an ecoPCR database
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.. cmdoption:: --ecopcrdb-output=<PREFIX_FILENAME>
Creates an ecoPCR database from sequence records results
Miscellaneous option
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.. cmdoption:: --uppercase
Print sequences in upper case (default is lower case)
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