1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
|
obitools (3.0.1~b26+dfsg-5) unstable; urgency=medium
* Team upload.
* cython3.patch: fix build failure with cython3. (Closes: #1119752)
* cflags.patch: new: propagate missing CFLAGS. (Closes: #1119509)
* d/{clean,rules}: repair the "clean" target. (Closes: #1047870)
* d/triggers: new: ensure ldconfig execution after install.
* no_cython_in_binary_package.patch: dep3 header.
* d/watch: convert to v5 PyPI project scanner.
* d/control: drop redundant Rules-Requires-Root: no.
* d/control: declare compliance to standards version 4.7.2.
-- Étienne Mollier <emollier@debian.org> Tue, 04 Nov 2025 23:20:25 +0100
obitools (3.0.1~b26+dfsg-4) unstable; urgency=medium
* Team upload.
* Add patch to fix FTBFS with Python 3.13 as the default (Closes: #1092065).
-- Stuart Prescott <stuart@debian.org> Fri, 10 Jan 2025 23:52:37 +1100
obitools (3.0.1~b26+dfsg-3) unstable; urgency=medium
* Team upload.
* Install the shared library to the correct directory and remove the
rpath.
* Add a basic smoke autopkgtest
* Improve cross-building
* Add another smoke test
* Add tutorial data and an autopkgtest using it.
* d/control: new upstream doesn't have any docs to build. Remove
remaining sphinx parts.
* Added patch to fix running on Python3.12+.
-- Michael R. Crusoe <crusoe@debian.org> Thu, 21 Nov 2024 16:40:55 +0100
obitools (3.0.1~b26+dfsg-2) unstable; urgency=medium
* Team upload.
* d/control: new homepage
* d/rules: don't try to run any tests, there aren't any.
* Fixed non-root builds.
-- Michael R. Crusoe <crusoe@debian.org> Thu, 21 Nov 2024 01:09:03 +0100
obitools (3.0.1~b26+dfsg-1) unstable; urgency=medium
* Team upload.
* d/watch: switch to OBITools3
* Deleted all patches except no_cython_in_binary_package.patch
* copyright: update for missing file
* d/control: needs cmake
* d/control: switch to Cython 3.x
* Added patch to enable building on any architecture.
-- Michael R. Crusoe <crusoe@debian.org> Wed, 20 Nov 2024 19:00:04 +0100
obitools (1.2.13+dfsg-9) unstable; urgency=medium
[ Sudip Mukherjee ]
* Use pickle to fix error with extractreads. (Closes: #1073586)
-- Andreas Tille <tille@debian.org> Thu, 20 Jun 2024 09:39:45 +0200
obitools (1.2.13+dfsg-8) unstable; urgency=medium
* Team upload.
* qsort.patch: new: replace heapsort by qsort. (Closes: #1066369)
* d/control: declare compliance to standards version 4.7.0.
-- Étienne Mollier <emollier@debian.org> Sat, 20 Apr 2024 10:41:15 +0200
obitools (1.2.13+dfsg-7) unstable; urgency=medium
* Drop cython3 dependency from binary package
Closes: #1057995
-- Andreas Tille <tille@debian.org> Sun, 17 Dec 2023 20:52:01 +0100
obitools (1.2.13+dfsg-6) unstable; urgency=medium
[ Bas Couwenberg ]
* Switch to cython3-legacy.
Closes: #1056824
[ Andreas Tille ]
* Standards-Version: 4.6.2 (routine-update)
-- Andreas Tille <tille@debian.org> Sun, 10 Dec 2023 11:55:11 +0100
obitools (1.2.13+dfsg-5) unstable; urgency=medium
[ Andreas Tille ]
* Team Upload.
* Disable build package on i386 on Salsa CI
* Disable blhc on Salsa CI
[ Nilesh Patra ]
* Add patch to fix FTBFS (Closes: #1022427)
* Bump Standards-Version to 4.6.1 (no changes needed)
-- Nilesh Patra <nilesh@debian.org> Mon, 24 Oct 2022 12:08:04 +0530
obitools (1.2.13+dfsg-4) unstable; urgency=medium
* Remove useless docs
* Do not link to code documentation which is not installed any more
Closes: #988858
* Standards-Version: 4.6.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Rules-Requires-Root: no (routine-update)
* watch file standard 4 (routine-update)
* Close Python3 port bug since upstream is dead and our 2to3 port has not
triggered any issue
Closes: #935340
-- Andreas Tille <tille@debian.org> Tue, 14 Dec 2021 13:32:34 +0100
obitools (1.2.13+dfsg-3) unstable; urgency=medium
[ Python3 port of obitools ]
* Use 2to3 to port from Python2 to Python3
Closes: #937177
* Manual patch for cython related files
[ Andreas Tille ]
* Add debian/NEWS
* Standards-Version: 4.5.0 (routine-update)
* Add salsa-ci file (routine-update)
-- Andreas Tille <tille@debian.org> Sat, 07 Mar 2020 07:47:13 +0100
obitools (1.2.13+dfsg-2) unstable; urgency=medium
* Apply patch by Olivier Sallou to work around bug at cleanup
This also prevents creating sphinx documentation.
Closes: #935287
* Standards-Version: 4.4.1
* Use secure URI in debian/watch.
* Remove src/OBITools.egg-info in clean target to build twice in a row
-- Andreas Tille <tille@debian.org> Mon, 02 Dec 2019 12:17:04 +0100
obitools (1.2.13+dfsg-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Created with routine-update script
* debhelper-compat 12
* Standards-Version: 4.4.0
* Build-Depends: s/python-sphinx/python3-sphinx/
-- Steffen Moeller <moeller@debian.org> Sat, 27 Jul 2019 13:11:02 +0200
obitools (1.2.12+dfsg-2) unstable; urgency=medium
* Drop ecoPCR.1.gz and ecofind.1 from package
Closes: #920359
* Section: science
-- Andreas Tille <tille@debian.org> Mon, 28 Jan 2019 16:24:48 +0100
obitools (1.2.12+dfsg-1) unstable; urgency=low
* Initial release (Closes: #783833)
-- Andreas Tille <tille@debian.org> Mon, 21 Jan 2019 21:25:12 +0100
|
