File: f90-reference.rst

package info (click to toggle)
odc 1.4.6-2
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 3,060 kB
  • sloc: cpp: 22,074; f90: 3,707; sh: 999; ansic: 471; python: 382; makefile: 39
file content (606 lines) | stat: -rw-r--r-- 19,699 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
.. index:: Reference; Fortran API
   :name: f90-reference

Fortran Reference
=================

Types
-----

.. f:type:: odc_reader

   Controls the ODB-2 data stream and associated resources, and gives access to the underlying frames

   :f open_path(path): :f:func:`🔗 <reader_open_path>`
   :f close(): :f:func:`🔗 <reader_close>`


.. f:type:: odc_frame

   Provides a viewport into a chunk of contiguous data within the ODB-2 stream

   :f initialise(reader): :f:func:`🔗 <frame_initialise>`
   :f free(): :f:func:`🔗 <frame_free>`
   :f copy(new_frame): :f:func:`🔗 <frame_copy>`
   :f next([aggregated, maximum_rows]): :f:func:`🔗 <frame_next>`
   :f row_count(nrows): :f:func:`🔗 <frame_row_count>`
   :f column_count(ncols): :f:func:`🔗 <frame_column_count>`
   :f column_attributes(col[, name, type, element_size, element_size_doubles, bitfield_count]): :f:func:`🔗 <frame_column_attributes>`
   :f bitfield_attributes(col, field[, name, offset, size]): :f:func:`🔗 <frame_bitfield_attributes>`
   :f properties_count(nproperties): :f:func:`🔗 <frame_properties_count>`
   :f property_idx(idx, key, val): :f:func:`🔗 <frame_property_idx>`
   :f property(key[, val, exists]): :f:func:`🔗 <frame_property>`


.. f:type:: odc_decoder

   Specifies which ODB-2 columns should be decoded and the memory that the decoded data should be put into

   :f initialise([column_major]): :f:func:`🔗 <decoder_initialise>`
   :f free(): :f:func:`🔗 <decoder_free>`
   :f defaults_from_frame(frame): :f:func:`🔗 <decoder_defaults_from_frame>`
   :f set_row_count(count): :f:func:`🔗 <decoder_set_row_count>`
   :f row_count(count): :f:func:`🔗 <decoder_row_count>`
   :f set_data(data[, column_major]): :f:func:`🔗 <decoder_set_data_array>`
   :f data([data, column_major]): :f:func:`🔗 <decoder_data_array>`
   :f add_column(name): :f:func:`🔗 <decoder_add_column>`
   :f column_count(count): :f:func:`🔗 <decoder_column_count>`
   :f column_set_data_size(col, element_size): :f:func:`🔗 <decoder_column_set_data_size>`
   :f column_set_data_array(col[, element_size, stride, data]): :f:func:`🔗 <decoder_column_set_data_array>`
   :f column_data_array(col[, element_size, element_size_doubles, stride, data]): :f:func:`🔗 <decoder_column_data_array>`
   :f decode(frame, rows_decoded[, nthreads]): :f:func:`🔗 <decoder_decode>`


.. f:type:: odc_encoder

   Describes data in memory and encodes it into ODB-2 frames

   :f logical column_major: Whether the column-major memory layout is used
   :f initialise(): :f:func:`🔗 <encoder_initialise>`
   :f free(): :f:func:`🔗 <encoder_free>`
   :f set_row_count(row_count): :f:func:`🔗 <encoder_set_row_count>`
   :f set_rows_per_frame(rows_per_frame): :f:func:`🔗 <encoder_set_rows_per_frame>`
   :f set_data(data[, column_major]): :f:func:`🔗 <encoder_set_data_array>`
   :f add_column(name, type): :f:func:`🔗 <encoder_add_column>`
   :f add_property(key, val): :f:func:`🔗 <encoder_add_property>`
   :f column_set_data_size(col[, element_size, element_size_doubles]): :f:func:`🔗 <encoder_column_set_data_size>`
   :f column_set_data_array(col[, element_size, element_size_doubles, stride, data]): :f:func:`🔗 <encoder_column_set_data_array>`
   :f column_add_bitfield(col, name, nbits): :f:func:`🔗 <encoder_column_add_bitfield>`
   :f encode(outunit, bytes_written): :f:func:`🔗 <encoder_encode>`


Constants
---------

.. _`f-column-data-types`:

Column Data Types
~~~~~~~~~~~~~~~~~

.. f:variable:: ODC_IGNORE
   :type: integer(c_int)
   :attrs: parameter=0

   Specifies that the column is ignored (invalid for real data)


.. f:variable:: ODC_INTEGER
   :type: integer(c_int)
   :attrs: parameter=1

   Specifies the column contains integer data


.. f:variable:: ODC_REAL
   :type: integer(c_int)
   :attrs: parameter=2

   Specifies the column contains 32-bit floating point values


.. f:variable:: ODC_STRING
   :type: integer(c_int)
   :attrs: parameter=3

   Specifies the column contains character (string) data


.. f:variable:: ODC_BITFIELD
   :type: integer(c_int)
   :attrs: parameter=4

   Specifies the column contains bitfield data


.. f:variable:: ODC_DOUBLE
   :type: integer(c_int)
   :attrs: parameter=5

   Specifies the column contains 64-bit floating point values


.. _`f-return-codes`:

Return Codes
~~~~~~~~~~~~

.. f:variable:: ODC_SUCCESS
   :type: integer
   :attrs: parameter=0

   The function completed successfully


.. f:variable:: ODC_ITERATION_COMPLETE
   :type: integer
   :attrs: parameter=1

   All frames have been returned, and the loop can be terminated successfully.


.. f:variable:: ODC_ERROR_GENERAL_EXCEPTION
   :type: integer
   :attrs: parameter=2

   A known error was encountered. Call ``odc_error_string()`` with the returned code for details.

.. f:variable:: ODC_ERROR_UNKNOWN_EXCEPTION
   :type: integer
   :attrs: parameter=3

   An unexpected and unknown error was encountered. Call ``odc_error_string()`` with the returned code for details.


.. _`f-integer-behaviour`:

Integer Behaviour
~~~~~~~~~~~~~~~~~

.. f:variable:: ODC_INTEGERS_AS_DOUBLES
   :type: integer
   :attrs: parameter=1

   Represent integers as doubles in the API (default)


.. f:variable:: ODC_INTEGERS_AS_LONGS
   :type: integer
   :attrs: parameter=2

   Represent integers as 64-bit integers in the API


Module Functions
----------------

.. f:function:: odc_initialise_api

   Initialises API, must be called before any other function

   .. note::

      This is only required if being used from a context where **eckit::Main()** is not otherwise initialised.

   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_version(version_str)

   Retrieves the release version of the library in human-readable format, e.g. ``1.3.0``

   :p character(:) version_str [out,allocatable]: Return variable for version number
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_vcs_version(git_sha1)

   Retrieves version control checksum of the latest change, e.g. ``a88011c007a0db48a5d16e296934a197eac2050a``

   :p character(:) git_sha1 [out,allocatable]: Return variable for version control checksum
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_column_type_name(type, type_name)

   Retrieves a human-readable name of a column data type

   :p integer(c_int) type [in]: Column data type :ref:`🔗 <f-column-data-types>`
   :p character(:) type_name [out,allocatable]: Return variable for column data type name
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_column_type_count(ntypes)

   Retrieves number of supported column data types

   :p integer(c_int) ntypes [out]: Return variable for number of data types
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_error_string(err)

   Returns a human-readable error message for an error code

   :p integer err [in]: Error code :ref:`🔗 <f-return-codes>`
   :r character(:) error_string [target,allocatable]: Error message


.. f:function:: odc_missing_integer(missing_integer)

   Retrieves the value that identifies a missing integer in the API

   :p integer(c_long) missing_integer [out]: Return variable for missing integer value
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_missing_double(missing_double)

   Retrieves the value that identifies a missing double in the API

   :p real(c_double) missing_double [out]: Return variable for missing double value
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_set_missing_integer(missing_integer)

   Sets the value that identifies a missing integer in the API

   :p integer(c_long) missing_integer [in,value]: Missing integer value
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_missing_double(missing_double)

   Sets the value that identifies a missing double in the API

   :p real(c_double) missing_double [in,value]: Missing double value
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_set_failure_handler(handler, context)

   Sets an error handler which will be called on error with the supplied context and an error code

   :p procedure(failure_handler_t) handler [pointer]: Error handler function
   :p integer(c_long) context: Error handler context
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: odc_integer_behaviour(integer_behaviour)

   Sets treatment of integers in the API

   :p integer(c_int) integer_behaviour [in,value]: Desired integer behaviour :ref:`🔗 <f-integer-behaviour>`
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


Type Methods
------------

.. f:function:: reader_open_path(path)

   Initialise the reader to read the ODB-2 data stream in the specified path.

   :p character(:) path [in]: File path to open
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: reader_close

   Closes opened reader

   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_initialise(reader)

   Initialises current frame associated with the specified reader

   :p odc_reader reader [inout]: Reader instance
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_free()

   Deallocates memory used up by the current frame

   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_copy(new_frame)

   Copies current frame to another frame

   :p odc_frame new_frame: Target frame instance to copy to
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_next([aggregated, maximum_rows])

   Advances to the next frame in the stream

   :o logical aggregated [in,default=.false.]: Whether to aggregate compatible data into a logical frame
   :o integer(c_long) maximum_rows [in]: Maximum number of aggregated rows, will turn on aggregation if supplied
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_row_count(nrows)

   Retrieves number of rows in current frame

   :p integer(c_long) nrows [out]: Return variable for number of rows
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_column_count(ncols)

   Retrieves number of columns in current frame

   :p integer(c_int) ncols [out]: Return variable for number of columns
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_column_attributes(col[, name, type, element_size, element_size_doubles, bitfield_count])

   Retrieves column attributes from current frame

   :p integer col [in]: Target column index
   :o character(:) name [out,allocatable]: Return variable for column name
   :o integer type [out]: Return variable for column data type :ref:`🔗 <f-column-data-types>`
   :o integer element_size [out]: Return variable for column size in bytes
   :o integer element_size_doubles [out]: Return variable for column size in number of doubles
   :o integer bitfield_count [out]: Return variable for number of column bitfields
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_bitfield_attributes(col, field[, name, offset, size])

   Retrieves bitfield attributes of a column

   :p integer col [in]: Target column index
   :p integer field [in]: Target bitfield index
   :o character(:) name [out,allocatable]: Return variable for bitfield name
   :o integer offset [out]: Return variable for bitfield offset
   :o integer size [out]: Return variable for bitfield size in bits
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_properties_count(nproperties)

   Retrieves number of the properties associated with the logical frame

   :p integer nproperties [out]: Return variable for number of properties
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_property_idx(idx, key, val)

   Retrieves the property key and value by its index

   :p integer idx [in]: Property index
   :p character(:) key [out,allocatable]: Return variable for property key
   :p character(:) val [out,allocatable]: Return variable for property value
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: frame_property(key[, val, exists])

   Retrieves the property value by its key

   :p character(:) key [in]: Property key
   :o character(:) val [out,allocatable]: Return variable for property value
   :o logical exists [out]: Return variable for property existence
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_initialise([column_major])

   Initialises current decoder

   :o logical column_major [in,default=.true.]: Whether to use the column-major memory layout
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_free()

   Deallocates memory used up by the current decoder

   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_defaults_from_frame(frame)

   Configures current decoder to decode all data contained in the supplied frame

   :p odc_frame frame [in]: Frame instance
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_set_row_count(count)

   Sets number of rows to allocate in current decoder

   :p integer(c_long) count [in]: Number of rows to allocate
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_row_count(count)

   Retrieves number of rows that are allocated in current decoder

   :p integer(c_long) count [out]: Return variable for number of rows
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_set_data_array(data[, column_major])

   Sets an output data array into which the data may be decoded

   :p real(dp) data(:,:) [inout,target]: Data array to decode into
   :o logical column_major [in,default=.true.]: Whether the column-major memory layout is used
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_data_array([data, column_major])

   Retrieves the output data array into which the data may be decoded

   :o real(dp) data(:,:) [inout]: Data array for decoded data
   :o logical column_major [out]: Return variable for the used column-major memory layout
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_add_column(name)

   Adds a data column to current decoder

   :p character(:) name [in]: Data column name
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_column_count(count)

   Retrieves number of columns that are allocated in current decoder

   :p integer count [out]: Return variable for number of columns
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_column_set_data_size(col, element_size)

   Sets the decoded data size for a column in bytes

   :p integer col [in]: Column index
   :p integer(c_int) element_size [in]: Column data size in bytes
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_column_set_data_array(col[, element_size, stride, data])

   Sets an output data array into which the data associated with the column can be decoded

   :p integer col [in]: Column index
   :o integer element_size [in]: Column data size in bytes
   :o integer stride [in]: Column data width in bytes
   :o type(c_ptr) data [in]: Column data array
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_column_data_array(col[, element_size, element_size_doubles, stride, data])

   Retrieves the buffer and data layout into which the data has been decoded

   :p integer col [in]: Column index
   :o integer element_size [out]: Return variable for column data size in bytes
   :o integer element_size_doubles [out]: Return variable for column data size in doubles
   :o integer stride [out]: Return variable for column data width in bytes
   :o type(c_ptr) data [out]: Return variable for column data array
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: decoder_decode(frame, rows_decoded[, nthreads])

   Decodes the data described by the frame into the configured data array(s)

   :p odc_frame frame [inout]: Frame instance
   :p integer(c_long) rows_decoded [out]: Return variable for number of decoded rows
   :o integer nthreads [in]: Number of threads
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_initialise()

   Initialises current encoder

   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_free()

   Deallocates memory used up by the current encoder

   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_set_row_count(row_count)

   Sets number of rows to allocate in current encoder

   :p integer(c_long) row_count [in]: Number of rows
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_set_rows_per_frame(rows_per_frame)

   Sets number of rows to encode per frame

   :p integer(c_long) rows_per_frame [in]: Number of rows per frame
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_set_data_array(data[, column_major])

   Sets input data array from which data may be encoded

   :p real(dp) data(:,:) [in,target]: Data array to encode
   :o logical column_major [in,default=.true.]: Whether the data is in column-major memory layout
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_add_column(name, type)

   Adds a data column to current encoder

   :p character(:) name [in]: Column name
   :p integer type [in]: Column data type :ref:`🔗 <f-column-data-types>`
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_add_property(key, val)

   Adds a key/value property to encode as part of the frame

   :p character(:) key [in]: Property key
   :p character(:) val [in]: Property value
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_column_set_data_size(col[, element_size, element_size_doubles])

   Sets the source data size for a column

   :p integer col [in]: Column index
   :o integer element_size [in]: Column data size in bytes
   :o integer element_size_doubles [in]: Column data size in doubles, will take precedence over **element_size** if provided
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_column_set_data_array(col[, element_size, element_size_doubles, stride, data])

   Sets a custom data layout and data array for a column

   :p integer col [in]: Column index
   :o integer element_size [in]: Column size in bytes
   :o integer element_size_doubles [in]: Column size in doubles, will take precedence over **element_size** if provided
   :o integer stride [in]: Column width in bytes
   :o type(c_ptr) data [in]: Column data array
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_column_add_bitfield(col, name, nbits)

   Adds a bitfield to a column

   :p integer col [in]: Column index
   :p character(:) name [in]: Bitfield name
   :p integer nbits [in]: Bitfield size in bits
   :r integer err: Return code :ref:`🔗 <f-return-codes>`


.. f:function:: encoder_encode(outunit, bytes_written)

   Encodes the data to Fortran I/O unit

   :p integer outunit [in]: Valid Fortran I/O unit
   :p integer(c_long) bytes_written [out]: Return variable for number of bytes written
   :r integer err: Return code :ref:`🔗 <f-return-codes>`