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# ----------------------------------------------------------------------------
# - Open3D: www.open3d.org -
# ----------------------------------------------------------------------------
# The MIT License (MIT)
#
# Copyright (c) 2018-2021 www.open3d.org
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
# IN THE SOFTWARE.
# ----------------------------------------------------------------------------
import open3d as o3d
import numpy as np
import os
import shutil
import sys
import zipfile
from os import listdir, makedirs
from os.path import exists, isfile, join, splitext, dirname, basename
import re
from warnings import warn
import json
import open3d as o3d
import copy
if (sys.version_info > (3, 0)):
pyver = 3
from urllib.request import Request, urlopen
else:
pyver = 2
from urllib2 import Request, urlopen
def edges_to_lineset(mesh, edges, color):
ls = o3d.geometry.LineSet()
ls.points = mesh.vertices
ls.lines = edges
ls.paint_uniform_color(color)
return ls
def get_plane_mesh(height=0.2, width=1):
mesh = o3d.geometry.TriangleMesh(
vertices=o3d.utility.Vector3dVector(
np.array(
[[0, 0, 0], [0, height, 0], [width, height, 0], [width, 0, 0]],
dtype=np.float32,
)),
triangles=o3d.utility.Vector3iVector(np.array([[0, 2, 1], [2, 0, 3]])),
)
mesh.compute_vertex_normals()
return mesh
def get_non_manifold_edge_mesh():
verts = np.array(
[[-1, 0, 0], [0, 1, 0], [1, 0, 0], [0, -1, 0], [0, 0, 1]],
dtype=np.float64,
)
triangles = np.array([[0, 1, 3], [1, 2, 3], [1, 3, 4]])
mesh = o3d.geometry.TriangleMesh()
mesh.vertices = o3d.utility.Vector3dVector(verts)
mesh.triangles = o3d.utility.Vector3iVector(triangles)
mesh.compute_vertex_normals()
mesh.rotate(
mesh.get_rotation_matrix_from_xyz((np.pi / 4, 0, np.pi / 4)),
center=mesh.get_center(),
)
return mesh
def get_non_manifold_vertex_mesh():
verts = np.array(
[
[-1, 0, -1],
[1, 0, -1],
[0, 1, -1],
[0, 0, 0],
[-1, 0, 1],
[1, 0, 1],
[0, 1, 1],
],
dtype=np.float64,
)
triangles = np.array([
[0, 1, 2],
[0, 1, 3],
[1, 2, 3],
[2, 0, 3],
[4, 5, 6],
[4, 5, 3],
[5, 6, 3],
[4, 6, 3],
])
mesh = o3d.geometry.TriangleMesh()
mesh.vertices = o3d.utility.Vector3dVector(verts)
mesh.triangles = o3d.utility.Vector3iVector(triangles)
mesh.compute_vertex_normals()
mesh.rotate(
mesh.get_rotation_matrix_from_xyz((np.pi / 4, 0, np.pi / 4)),
center=mesh.get_center(),
)
return mesh
def get_open_box_mesh():
mesh = o3d.geometry.TriangleMesh.create_box()
mesh.triangles = o3d.utility.Vector3iVector(np.asarray(mesh.triangles)[:-2])
mesh.compute_vertex_normals()
mesh.rotate(
mesh.get_rotation_matrix_from_xyz((0.8 * np.pi, 0, 0.66 * np.pi)),
center=mesh.get_center(),
)
return mesh
def get_intersecting_boxes_mesh():
mesh0 = o3d.geometry.TriangleMesh.create_box()
T = np.eye(4)
T[:, 3] += (0.5, 0.5, 0.5, 0)
mesh1 = o3d.geometry.TriangleMesh.create_box()
mesh1.transform(T)
mesh = mesh0 + mesh1
mesh.compute_vertex_normals()
mesh.rotate(
mesh.get_rotation_matrix_from_xyz((0.7 * np.pi, 0, 0.6 * np.pi)),
center=mesh.get_center(),
)
return mesh
def file_downloader(url, out_dir="."):
file_name = url.split('/')[-1]
u = urlopen(url)
f = open(os.path.join(out_dir, file_name), "wb")
if pyver == 2:
meta = u.info()
file_size = int(meta.getheaders("Content-Length")[0])
elif pyver == 3:
file_size = int(u.getheader("Content-Length"))
print("Downloading: %s " % file_name)
file_size_dl = 0
block_sz = 8192
progress = 0
while True:
buffer = u.read(block_sz)
if not buffer:
break
file_size_dl += len(buffer)
f.write(buffer)
if progress + 10 <= (file_size_dl * 100. / file_size):
progress = progress + 10
print(" %.1f / %.1f MB (%.0f %%)" % \
(file_size_dl/(1024*1024), file_size/(1024*1024), progress))
f.close()
def unzip_data(path_zip, path_extract_to):
print("Unzipping %s" % path_zip)
zip_ref = zipfile.ZipFile(path_zip, 'r')
zip_ref.extractall(path_extract_to)
zip_ref.close()
print("Extracted to %s" % path_extract_to)
def sorted_alphanum(file_list_ordered):
convert = lambda text: int(text) if text.isdigit() else text
alphanum_key = lambda key: [convert(c) for c in re.split('([0-9]+)', key)]
return sorted(file_list_ordered, key=alphanum_key)
def get_file_list(path, extension=None):
if extension is None:
file_list = [path + f for f in listdir(path) if isfile(join(path, f))]
else:
file_list = [
path + f
for f in listdir(path)
if isfile(join(path, f)) and splitext(f)[1] == extension
]
file_list = sorted_alphanum(file_list)
return file_list
def add_if_exists(path_dataset, folder_names):
for folder_name in folder_names:
if exists(join(path_dataset, folder_name)):
path = join(path_dataset, folder_name)
return path
raise FileNotFoundError(
f"None of the folders {folder_names} found in {path_dataset}")
def read_rgbd_image(color_file, depth_file, convert_rgb_to_intensity, config):
color = o3d.io.read_image(color_file)
depth = o3d.io.read_image(depth_file)
rgbd_image = o3d.geometry.RGBDImage.create_from_color_and_depth(
color,
depth,
depth_scale=config["depth_scale"],
depth_trunc=config["depth_max"],
convert_rgb_to_intensity=convert_rgb_to_intensity)
return rgbd_image
def get_rgbd_folders(path_dataset):
path_color = add_if_exists(path_dataset, ["image/", "rgb/", "color/"])
path_depth = join(path_dataset, "depth/")
return path_color, path_depth
def get_rgbd_file_lists(path_dataset):
path_color, path_depth = get_rgbd_folders(path_dataset)
color_files = get_file_list(path_color, ".jpg") + \
get_file_list(path_color, ".png")
depth_files = get_file_list(path_depth, ".png")
return color_files, depth_files
def make_clean_folder(path_folder):
if not exists(path_folder):
makedirs(path_folder)
else:
shutil.rmtree(path_folder)
makedirs(path_folder)
def check_folder_structure(path_dataset):
if isfile(path_dataset) and path_dataset.endswith(".bag"):
return
path_color, path_depth = get_rgbd_folders(path_dataset)
assert exists(path_depth), \
"Path %s is not exist!" % path_depth
assert exists(path_color), \
"Path %s is not exist!" % path_color
def write_poses_to_log(filename, poses):
with open(filename, 'w') as f:
for i, pose in enumerate(poses):
f.write('{} {} {}\n'.format(i, i, i + 1))
f.write('{0:.8f} {1:.8f} {2:.8f} {3:.8f}\n'.format(
pose[0, 0], pose[0, 1], pose[0, 2], pose[0, 3]))
f.write('{0:.8f} {1:.8f} {2:.8f} {3:.8f}\n'.format(
pose[1, 0], pose[1, 1], pose[1, 2], pose[1, 3]))
f.write('{0:.8f} {1:.8f} {2:.8f} {3:.8f}\n'.format(
pose[2, 0], pose[2, 1], pose[2, 2], pose[2, 3]))
f.write('{0:.8f} {1:.8f} {2:.8f} {3:.8f}\n'.format(
pose[3, 0], pose[3, 1], pose[3, 2], pose[3, 3]))
def read_poses_from_log(traj_log):
import numpy as np
trans_arr = []
with open(traj_log) as f:
content = f.readlines()
# Load .log file.
for i in range(0, len(content), 5):
# format %d (src) %d (tgt) %f (fitness)
data = list(map(float, content[i].strip().split(' ')))
ids = (int(data[0]), int(data[1]))
fitness = data[2]
# format %f x 16
T_gt = np.array(
list(map(float, (''.join(
content[i + 1:i + 5])).strip().split()))).reshape((4, 4))
trans_arr.append(T_gt)
return trans_arr
flip_transform = [[1, 0, 0, 0], [0, -1, 0, 0], [0, 0, -1, 0], [0, 0, 0, 1]]
def draw_geometries_flip(pcds):
pcds_transform = []
for pcd in pcds:
pcd_temp = copy.deepcopy(pcd)
pcd_temp.transform(flip_transform)
pcds_transform.append(pcd_temp)
o3d.visualization.draw_geometries(pcds_transform)
def draw_registration_result(source, target, transformation):
source_temp = copy.deepcopy(source)
target_temp = copy.deepcopy(target)
source_temp.paint_uniform_color([1, 0.706, 0])
target_temp.paint_uniform_color([0, 0.651, 0.929])
source_temp.transform(transformation)
source_temp.transform(flip_transform)
target_temp.transform(flip_transform)
o3d.visualization.draw_geometries([source_temp, target_temp])
def draw_registration_result_original_color(source, target, transformation):
source_temp = copy.deepcopy(source)
target_temp = copy.deepcopy(target)
source_temp.transform(transformation)
source_temp.transform(flip_transform)
target_temp.transform(flip_transform)
o3d.visualization.draw_geometries([source_temp, target_temp])
class CameraPose:
def __init__(self, meta, mat):
self.metadata = meta
self.pose = mat
def __str__(self):
return 'Metadata : ' + ' '.join(map(str, self.metadata)) + '\n' + \
"Pose : " + "\n" + np.array_str(self.pose)
def read_trajectory(filename):
traj = []
with open(filename, 'r') as f:
metastr = f.readline()
while metastr:
metadata = list(map(int, metastr.split()))
mat = np.zeros(shape=(4, 4))
for i in range(4):
matstr = f.readline()
mat[i, :] = np.fromstring(matstr, dtype=float, sep=' \t')
traj.append(CameraPose(metadata, mat))
metastr = f.readline()
return traj
def write_trajectory(traj, filename):
with open(filename, 'w') as f:
for x in traj:
p = x.pose.tolist()
f.write(' '.join(map(str, x.metadata)) + '\n')
f.write('\n'.join(
' '.join(map('{0:.12f}'.format, p[i])) for i in range(4)))
f.write('\n')
def initialize_opencv():
opencv_installed = True
try:
import cv2
except ImportError:
pass
print("OpenCV is not detected. Using Identity as an initial")
opencv_installed = False
if opencv_installed:
print("OpenCV is detected. Using ORB + 5pt algorithm")
return opencv_installed
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