File: obconversion_readstring.py

package info (click to toggle)
openbabel 2.3.1%2Bdfsg-4
  • links: PTS, VCS
  • area: main
  • in suites: wheezy
  • size: 76,164 kB
  • sloc: cpp: 316,390; ansic: 91,270; python: 6,971; perl: 6,591; pascal: 793; sh: 193; xml: 97; ruby: 55; makefile: 38; java: 23; cs: 14
file content (13 lines) | stat: -rw-r--r-- 308 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
import openbabel as ob

# Initialize the OBConversion object
conv = ob.OBConversion()
if not conv.SetInFormat('smi'):
  print 'could not find smiles format'

# Read the smiles string
mol = ob.OBMol()
if not conv.ReadString(mol, 'CCCC'):
  print 'could not read the smiles string'

# ... Use OBMol object ...