1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733
|
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html>
<head><meta http-equiv="Content-Type" content="text/html;charset=utf-8">
<title>OBMessageHandler Class Reference</title>
<link href="/site.css" rel="stylesheet" type="text/css">
<link href="doxygen.css" rel="stylesheet" type="text/css">
<link href="tabs.css" rel="stylesheet" type="text/css">
<script type="text/javascript" src="search/search.js"></script>
<link href="search/search.css" rel="stylesheet" type="text/css"/>
</head>
<body>
<!--#include file="header.html" -->
<!-- Generated by Doxygen 1.7.5.1 -->
<script type="text/javascript">
var searchBox = new SearchBox("searchBox", "search",false,'Search');
</script>
<div id="navrow1" class="tabs">
<ul class="tablist">
<li><a href="index.shtml"><span>Main Page</span></a></li>
<li><a href="pages.shtml"><span>Related Pages</span></a></li>
<li><a href="modules.shtml"><span>Modules</span></a></li>
<li><a href="namespaces.shtml"><span>Namespaces</span></a></li>
<li class="current"><a href="annotated.shtml"><span>Classes</span></a></li>
<li><a href="files.shtml"><span>Files</span></a></li>
<li><a href="examples.shtml"><span>Examples</span></a></li>
<li>
<div id="MSearchBox" class="MSearchBoxInactive">
<span class="left">
<img id="MSearchSelect" src="search/mag_sel.png"
onmouseover="return searchBox.OnSearchSelectShow()"
onmouseout="return searchBox.OnSearchSelectHide()"
alt=""/>
<input type="text" id="MSearchField" value="Search" accesskey="S"
onfocus="searchBox.OnSearchFieldFocus(true)"
onblur="searchBox.OnSearchFieldFocus(false)"
onkeyup="searchBox.OnSearchFieldChange(event)"/>
</span><span class="right">
<a id="MSearchClose" href="javascript:searchBox.CloseResultsWindow()"><img id="MSearchCloseImg" border="0" src="search/close.png" alt=""/></a>
</span>
</div>
</li>
</ul>
</div>
<div id="navrow2" class="tabs2">
<ul class="tablist">
<li><a href="annotated.shtml"><span>Class List</span></a></li>
<li><a href="classes.shtml"><span>Class Index</span></a></li>
<li><a href="hierarchy.shtml"><span>Class Hierarchy</span></a></li>
<li><a href="functions.shtml"><span>Class Members</span></a></li>
</ul>
</div>
<div id="nav-path" class="navpath">
<ul>
<li class="navelem"><a class="el" href="namespaceOpenBabel.shtml">OpenBabel</a> </li>
<li class="navelem"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml">OBMessageHandler</a> </li>
</ul>
</div>
</div>
<div class="header">
<div class="summary">
<a href="#pub-methods">Public Member Functions</a> |
<a href="#pro-attribs">Protected Attributes</a> </div>
<div class="headertitle">
<div class="title">OBMessageHandler Class Reference</div> </div>
</div>
<div class="contents">
<!-- doxytag: class="OpenBabel::OBMessageHandler" -->
<p><code>#include <<a class="el" href="oberror_8h_source.shtml">openbabel/oberror.h</a>></code></p>
<p><a href="classOpenBabel_1_1OBMessageHandler-members.shtml">List of all members.</a></p>
<table class="memberdecls">
<tr><td colspan="2"><h2><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a5cce70bc2fc932b31d3f31bda5900414">OBMessageHandler</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a4cc3bdf8e84224428a5bde1179b8cc60">~OBMessageHandler</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a2482566201934523c4631d85b1214a70">ThrowError</a> (<a class="el" href="classOpenBabel_1_1OBError.shtml">OBError</a> err, <a class="el" href="namespaceOpenBabel.shtml#a91e6912277f7537a670952698f7b2d82">errorQualifier</a> qqualifier=always)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a40f9d382b5453a4cbf744c9be7f98ab2">ThrowError</a> (const std::string &method, const std::string &errorMsg, <a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> level=obDebug, <a class="el" href="namespaceOpenBabel.shtml#a91e6912277f7537a670952698f7b2d82">errorQualifier</a> qualifier=always)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">std::vector< std::string > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#aaacf3302e7348bab13284a1336040240">GetMessagesOfLevel</a> (const <a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a>)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a2ddeff91a6a4f113be67243d32aae4f0">StartLogging</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a08d309e66bc4091df861de396b6dd4a4">StopLogging</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a77f52cdbd233a78a86a17fdbc5b1aeba">SetMaxLogEntries</a> (unsigned int max)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">unsigned int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ad5cc775d9bcbe374ba8e3a7706441187">GetMaxLogEntries</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#af69ea3bc45568000475c11f584bd6506">ClearLog</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ae467fbd6fca625ae5ee0ea066810280f">SetOutputLevel</a> (const <a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> level)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a3e6a1f72967b7b5e99d6a25cdde2fe34">GetOutputLevel</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a8d5a7033d340808ae4eb4602a6f638de">SetOutputStream</a> (std::ostream *os)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">std::ostream * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#afa3e05fe5fa00cc48db4a2b5b5f3ba95">GetOutputStream</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ab7822d9b9f26fac754fa79efab0dfcaf">StartErrorWrap</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ac846e5a1ffd589891812b87e129b1a67">StopErrorWrap</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">unsigned int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a43dbb5cf7a6a8e51944720b532ebf0a3">GetErrorMessageCount</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">unsigned int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ad8c74030fe5436581bebd5c42af17bc5">GetWarningMessageCount</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">unsigned int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a00c4e7133ee9e7290c0002445789c1c6">GetInfoMessageCount</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">unsigned int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a48866a67a47b80b0d0c6adf5267e72eb">GetAuditMessageCount</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">unsigned int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a673ec0e1a1c14ca7117e07a90efcd8ee">GetDebugMessageCount</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ab58fc0b88f40b7dca684dfad13d587b7">GetMessageSummary</a> ()</td></tr>
<tr><td colspan="2"><h2><a name="pro-attribs"></a>
Protected Attributes</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">unsigned int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a5812cd4eb01367908022f9ef86e49ec6">_messageCount</a> [5]</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">std::deque< <a class="el" href="classOpenBabel_1_1OBError.shtml">OBError</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a08ea2212aebb85ea22895ec49bd81f85">_messageList</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#abddad1d062682a33800f8d048a1e35f6">_outputLevel</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">std::ostream * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#adff5b7b50cde9f6620dc08128df860c4">_outputStream</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a3c4c6fad78b988cdc4fc9b7ade5e788c">_logging</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">unsigned int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a7a0d2d55c1de9a5afc3bf71abedfdddd">_maxEntries</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">std::streambuf * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a3e0837dfabcca64b1bdf2392e70b3228">_inWrapStreamBuf</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">std::streambuf * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a9285cdb5ae08c9a33cd6d6998cd69a26">_filterStreamBuf</a></td></tr>
</table>
<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
<div class="textblock"><p>Handle error messages, warnings, debugging information and the like. </p>
<p><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml" title="Handle error messages, warnings, debugging information and the like.">OBMessageHandler</a> represents a configurable error system for Open Babel.</p>
<p>A global error log is defined by the Open Babel library for use of internal code as well as code built on top of Open Babel. This class allows flexible filtering based on urgency (defined by the obMessageLevel type), an "audit log" of molecular changes, including recall using the GetMessagesOfLevel method, etc.</p>
<p>The default is to only log and output errors of priority obMessageLevel::obError or obMessageLevel::obWarning.</p>
<p>Long-running code may wish to set the size of the in-memory error log using the StartLogging / StopLogging methods and SetMaxLogEntries. Otherwise, the error log may easily fill up, requiring large amounts of memory.</p>
<p>If you wish to divert error output to a different std::ostream (i.e., for graphical display, or a file log), use the SetOutputStream method -- the default goes to the std::clog stream. Furthermore, some older code uses std::cerr for direct error output, rather than the <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a2482566201934523c4631d85b1214a70" title="Throw an error with an already-formatted OBError object.">ThrowError()</a> methods in this class. To prevent this, you can turn on "error wrapping" using the StartErrorWrap method -- this behavior is turned off by default.</p>
<p>To make it easy to use the <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml" title="Handle error messages, warnings, debugging information and the like.">OBMessageHandler</a> class and error logging facilities, a global log is defined:</p>
<div class="fragment"><pre class="fragment"> OBERROR <span class="keyword">extern</span> <a class="code" href="classOpenBabel_1_1OBMessageHandler.shtml#a5cce70bc2fc932b31d3f31bda5900414">OBMessageHandler</a> <a class="code" href="namespaceOpenBabel.shtml#a394eef44b3dd6a9174067715712c2d16" title="Global OBMessageHandler error handler.">obErrorLog</a>;
</pre></div><p>Therefore, it is very easy to log errors:</p>
<div class="fragment"><pre class="fragment"> <span class="keywordflow">if</span> (atomIndex < 1 || atomIndex > mol.NumAtoms() )
obErrorLog.ThrowError(__FUNCTION__, <span class="stringliteral">"Requested Atom Out of Range"</span>, <a class="code" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9afd56eb19b254da4133c9c28f7cccf5ce" title="for messages only useful for debugging purposes">obDebug</a>);
</pre></div><p>or</p>
<div class="fragment"><pre class="fragment"> stringstream errorMsg;
errorMsg << <span class="stringliteral">" Could not parse line in type translation table types.txt -- incorect number of columns"</span>;
errorMsg << <span class="stringliteral">" found "</span> << vc.size() << <span class="stringliteral">" expected "</span> << _ncols << <span class="stringliteral">"."</span>;
obErrorLog.ThrowError(__FUNCTION__, errorMsg.str(), <a class="code" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9a8239e6e8daa5c812be192e6447979814" title="for informative messages (e.g., file is a non-standard format)">obInfo</a>);
</pre></div><p>The __FUNCTION__ builtin is defined by many compilers (e.g., <a href="http://gcc.gnu.org/">GCC</a>) but can be defined to an empty string on some platforms without this compiler extension.</p>
<p>Output from the error log typically looks like: </p>
<div class="fragment"><pre class="fragment"> ==============================
Open Babel Audit Log in ReadChemObject
OpenBabel::Read molecule Protein Data Bank format
==============================
Open Babel Information in ParseConectRecord
WARNING: Problems reading a PDB file
Problems reading a CONECT record.
According to the PDB specification,
the record should have 70 columns, but OpenBabel found 61 columns.
</pre></div> </div><hr/><h2>Constructor & Destructor Documentation</h2>
<a class="anchor" id="a5cce70bc2fc932b31d3f31bda5900414"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::OBMessageHandler" ref="a5cce70bc2fc932b31d3f31bda5900414" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml">OBMessageHandler</a> </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
</table>
</div>
<div class="memdoc">
</div>
</div>
<a class="anchor" id="a4cc3bdf8e84224428a5bde1179b8cc60"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::~OBMessageHandler" ref="a4cc3bdf8e84224428a5bde1179b8cc60" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">~<a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml">OBMessageHandler</a> </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
</table>
</div>
<div class="memdoc">
</div>
</div>
<hr/><h2>Member Function Documentation</h2>
<a class="anchor" id="a2482566201934523c4631d85b1214a70"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::ThrowError" ref="a2482566201934523c4631d85b1214a70" args="(OBError err, errorQualifier qqualifier=always)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void ThrowError </td>
<td>(</td>
<td class="paramtype"><a class="el" href="classOpenBabel_1_1OBError.shtml">OBError</a> </td>
<td class="paramname"><em>err</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype"><a class="el" href="namespaceOpenBabel.shtml#a91e6912277f7537a670952698f7b2d82">errorQualifier</a> </td>
<td class="paramname"><em>qqualifier</em> = <code>always</code> </td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Throw an error with an already-formatted <a class="el" href="classOpenBabel_1_1OBError.shtml" title="Customizable error handling and logging -- store a message, including the method yielding the error...">OBError</a> object. </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1FastSearchIndexer.shtml#ad4714872089241b8d1b5bb6b714b5e5c">FastSearchIndexer::Add()</a>, <a class="el" href="classOpenBabel_1_1OBChiralData.shtml#aca994f4a7f7e175991a4f0c3c99f99d6">OBChiralData::AddAtomRef()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a62e485fd693d4458ab5c47835afab049">OBMol::AddBond()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a342df96ba3cd8751e19758939dbef2f5">OBConversion::AddChemObject()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ad3bab31bf64ff6cb18f6ee259b3b8c11">OBMol::AddHydrogens()</a>, <a class="el" href="classOpenBabel_1_1OBDescriptor.shtml#a2230dfc67c9b617df81f950e382844cc">OBDescriptor::AddProperties()</a>, <a class="el" href="classOpenBabel_1_1OBAlign.shtml#a946a73d3de978fd930793711f23e00b3">OBAlign::Align()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a228de88f48ee3ca6a11554b74d82dedd">OBMol::Align()</a>, <a class="el" href="namespaceOpenBabel.shtml#a818fd93f0aa1e1f5b3c63bbbc8013cca">OpenBabel::AllocateByteCode()</a>, <a class="el" href="classOpenBabel_1_1OBChemTsfm.shtml#a1df01dc22c67cc084e1c82b8f9333cab">OBChemTsfm::Apply()</a>, <a class="el" href="classOpenBabel_1_1patty.shtml#aef2ec72bd2c0b6c3846d20c1ba1fce3f">patty::assign_types()</a>, <a class="el" href="classOpenBabel_1_1OBAromaticTyper.shtml#a5efe4ccada855f2e0c4b0f57614f8607">OBAromaticTyper::AssignAromaticFlags()</a>, <a class="el" href="classOpenBabel_1_1OBAtomTyper.shtml#ae773554c61c3b4f4c855ead5bec93ee6">OBAtomTyper::AssignHyb()</a>, <a class="el" href="classOpenBabel_1_1OBAtomTyper.shtml#a86b4345447c96d52bd0f44557729d285">OBAtomTyper::AssignImplicitValence()</a>, <a class="el" href="classOpenBabel_1_1OBGastChrg.shtml#a1c145997cdde372b0d870cabc0aede0a">OBGastChrg::AssignPartialCharges()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ad85ec95d1f909843737b67d70638f3c9">OBMol::AssignSpinMultiplicity()</a>, <a class="el" href="classOpenBabel_1_1OBAtomTyper.shtml#ad7c6f09e6720f6041c81097b407d0961">OBAtomTyper::AssignTypes()</a>, <a class="el" href="classOpenBabel_1_1OBRingTyper.shtml#ad7c6f09e6720f6041c81097b407d0961">OBRingTyper::AssignTypes()</a>, <a class="el" href="namespaceOpenBabel.shtml#ac8f591b34d70fd0063b836ddf6d8cdbc">OpenBabel::CalcSignedVolume()</a>, <a class="el" href="namespaceOpenBabel.shtml#a7145217d4de73e243d2d3888dac404ba">OpenBabel::CartesianToInternal()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ab9f6ba6fae7e12d0f61f5fd8e746aaf3">OBMol::Center()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a39b6cebdf53672368cfa3edd8bc7740d">OBConversion::CheckForUnintendedBatch()</a>, <a class="el" href="structOpenBabel_1_1FptIndex.shtml#a682b05eef24f11179405526ff6f81095">FptIndex::CheckFP()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ad12fd937da5f4b0c4562888252fe214b">OBMol::Clear()</a>, <a class="el" href="classOpenBabel_1_1OBDescriptor.shtml#a5a775da37f5ce464013813ec66b3a349">OBDescriptor::Compare()</a>, <a class="el" href="classOpenBabel_1_1OBDescriptor.shtml#a00c8a88c0a36c9a1167b119214e015e6">OBDescriptor::CompareStringWithFilter()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a31d05972f7454e791641c4a7d0071d12">OBMol::ConnectTheDots()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a95c512f009bf277d9d6299d9f5d0c13d">OBConversion::Convert()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#acba192e5cf0db39c2ed6af7ba05328dc">OBMol::ConvertDativeBonds()</a>, <a class="el" href="namespaceOpenBabel.shtml#a13eb26f56a8a475622fba5fc01d4d50e">OpenBabel::CorrectBadResonanceForm()</a>, <a class="el" href="classOpenBabel_1_1OBPhModel.shtml#aae3bb8e98c90f3eb77b8654341eef135">OBPhModel::CorrectForPH()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a7af037d80801b43ae5450bd74004d669">OBMol::CorrectForPH()</a>, <a class="el" href="classOpenBabel_1_1OBBuilder.shtml#a568e42fdfa07962a14761bb9875ee138">OBBuilder::CorrectStereoAtoms()</a>, <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a486c6525ca5f6e49f4c9a3905805b9a9">OBMoleculeFormat::DeferMolOutput()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a4e2ddc39752d20fabcda1afc1cc4e8e4">OBMol::DeleteHydrogens()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a2993ead33ec2a4b15dd536d798ff844d">OBMol::DeleteNonPolarHydrogens()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a6b78f4cdf91366de39994ade8edc9775">OBMol::DoTransformations()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ac32ffc23db124156a953e8e5cb923ccd">OBMol::EndModify()</a>, <a class="el" href="classOpenBabel_1_1AliasData.shtml#ae9370e865e83b4dfefbb8b6cb2c15535">AliasData::Expand()</a>, <a class="el" href="namespaceOpenBabel.shtml#a31ce8b089ca36508940585406a2f93f1">OpenBabel::expand_cycle()</a>, <a class="el" href="namespaceOpenBabel.shtml#a62de79552e98ffdb88a9b8509a705158">OpenBabel::expandKekulize()</a>, <a class="el" href="namespaceOpenBabel.shtml#afb8652b972f454e6ab6a58c7ffa46380">OpenBabel::FatalAllocationError()</a>, <a class="el" href="namespaceOpenBabel.shtml#a59c2e046bb935ac3eba0d3b003d10176">OpenBabel::FatalMemoryError()</a>, <a class="el" href="classOpenBabel_1_1OBDescriptor.shtml#a1d0907c6fab9cdb01ce11858eb5f0860">OBDescriptor::FilterCompare()</a>, <a class="el" href="classOpenBabel_1_1SpaceGroup.shtml#adc5179fa55c4d176d458cadb7ffd2afe">SpaceGroup::Find()</a>, <a class="el" href="classOpenBabel_1_1FastSearch.shtml#a575cc7caa2b2a42bec8b47e7c0206a80">FastSearch::Find()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a39a5ee36b2320d9191dac24acf90b03e">OBMol::FindLSSR()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ae58b3f3da59d333ffa0d5b0f005f3526">OBMol::FindRingAtomsAndBonds()</a>, <a class="el" href="classOpenBabel_1_1OBRotorList.shtml#aca77a345e848bcedd33f56b03844d014">OBRotorList::FindRotors()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ad4e3eab0d027bd8e503d02e7261ca477">OBMol::FindSSSR()</a>, <a class="el" href="classOpenBabel_1_1OBFingerprint.shtml#a9bbe06daca0e9e000492cc6a89d7dabd">OBFingerprint::Fold()</a>, <a class="el" href="classOpenBabel_1_1OBBitVec.shtml#a0e38205f69ea775ac85766e8fa84aa09">OBBitVec::FromString()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a9d12b0f7f38951d2d1065fc7ddae4229">OBConversion::FullConvert()</a>, <a class="el" href="namespaceOpenBabel.shtml#a1748035db13037545433f80148a7c928">OpenBabel::GenerateByteCodes()</a>, <a class="el" href="classOpenBabel_1_1OBAlign.shtml#a6a9ca08185bebf3307c4a1acd31e58c3">OBAlign::GetAlignment()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#af2f78686dc35b7f79f44edc55b42d14a">OBMol::GetAtom()</a>, <a class="el" href="classOpenBabel_1_1OBChiralData.shtml#a1f91ee5ea208d5d3038fb753dffafcfe">OBChiralData::GetAtom4Refs()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a3e8b5af457f70a6f106be30b3375c7f5">OBMol::GetAtomById()</a>, <a class="el" href="classOpenBabel_1_1OBElementTable.shtml#a4f3c95b233fb0842946292b984acf1a3">OBElementTable::GetAtomicNum()</a>, <a class="el" href="namespaceOpenBabel.shtml#a896fe2a9e9925cda30253ea47ab123c6">OpenBabel::GetAtomIDNumber()</a>, <a class="el" href="classOpenBabel_1_1OBChiralData.shtml#a107ae45be73b2ef79045015f04cd73b1">OBChiralData::GetAtomRef()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ac2d4e8eb07783443a8d663057e5193ab">OBMol::GetBond()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a6a6ff88d670f69d418f0ad0ad76771db">OBMol::GetBondById()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a7adc12bff502264eaebf537a5e28a43c">OBMol::GetFormula()</a>, <a class="el" href="classOpenBabel_1_1OBDescriptor.shtml#a9d1adeb0f4720b6af7f0fc5569a8bb3e">OBDescriptor::GetIdentifier()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#afef672662f0f83abd8149e15cc531f01">OBMol::GetResidue()</a>, <a class="el" href="classOpenBabel_1_1OBAlign.shtml#a060c746a125272a535ec8f6b59f5338a">OBAlign::GetRMSD()</a>, <a class="el" href="classOpenBabel_1_1OBAlign.shtml#a53e6707da019dfa88df1e8c1aeeb6f67">OBAlign::GetRotMatrix()</a>, <a class="el" href="classOpenBabel_1_1OBRotorRules.shtml#ab7527366ed1bf39da7123e3ad65d96ad">OBRotorRules::GetRotorIncrements()</a>, <a class="el" href="classOpenBabel_1_1OBChiralData.shtml#a16086309583fe9a7f917a54b151a2cce">OBChiralData::GetSize()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ab78d46b60f04702fa6f450ef6f8dae62">OBMol::GetTotalCharge()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#aa431b859ed26f5a45e6ddc3448da1d1f">OBMol::GetTotalSpinMultiplicity()</a>, <a class="el" href="classOpenBabel_1_1OBDescriptor.shtml#a789fe3d5cae737f1caa28590fe29f460">OBDescriptor::GetValues()</a>, <a class="el" href="classOpenBabel_1_1OBAtom.shtml#a51618686d8ad1b5f66ff2fc2c607493e">OBAtom::HtoMethyl()</a>, <a class="el" href="classOpenBabel_1_1OBGlobalDataBase.shtml#a1e3b6d38df0786ccf7f938d60e386aae">OBGlobalDataBase::Init()</a>, <a class="el" href="namespaceOpenBabel.shtml#ae82e7b7b74e5212eada681c15afb77f4">OpenBabel::InternalToCartesian()</a>, <a class="el" href="classOpenBabel_1_1OBBond.shtml#ab91f9d866c216bcb3ffc5aa0774b5177">OBBond::IsClosure()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a457c69b9a377efcbdb9e8be871f17fc2">OBMol::Kekulize()</a>, <a class="el" href="classOpenBabel_1_1OBBuilder.shtml#afe0a7e760f4908db34dfb69dc65d3bba">OBBuilder::LoadFragments()</a>, <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#ae40f23c84fd00ee442effa0c543a43c3">OBMoleculeFormat::MakeCombinedMolecule()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ab74a82552a9576514b189e2a265d5f5a">OBMol::NewPerceiveKekuleBonds()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#aea0a1d956ad2f87302924423930c793b">OBConversion::NumInputObjects()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a23aaa3e3be1f55323cd956b53f6b0417">OBConversion::OpenAndSetFormat()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a7424c6fe9292f59087d23e7748ac237e">OBConversion::OpenInAndOutFiles()</a>, <a class="el" href="namespaceOpenBabel.shtml#a54358a339fc06df028bb5fbe403b0032">OpenBabel::operator>>()</a>, <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#aabcab4054392d585a1e3b2d108aead54">OBMoleculeFormat::OutputDeferredMols()</a>, <a class="el" href="classOpenBabel_1_1OBBondTyper.shtml#ae59fef8af62e52629bf2576e34a26801">OBBondTyper::ParseLine()</a>, <a class="el" href="classOpenBabel_1_1OBAtomTyper.shtml#ae59fef8af62e52629bf2576e34a26801">OBAtomTyper::ParseLine()</a>, <a class="el" href="classOpenBabel_1_1OBAromaticTyper.shtml#ae59fef8af62e52629bf2576e34a26801">OBAromaticTyper::ParseLine()</a>, <a class="el" href="classOpenBabel_1_1OBRotorRules.shtml#ae59fef8af62e52629bf2576e34a26801">OBRotorRules::ParseLine()</a>, <a class="el" href="classOpenBabel_1_1OBRingTyper.shtml#ae59fef8af62e52629bf2576e34a26801">OBRingTyper::ParseLine()</a>, <a class="el" href="classOpenBabel_1_1OBPhModel.shtml#ae59fef8af62e52629bf2576e34a26801">OBPhModel::ParseLine()</a>, <a class="el" href="classOpenBabel_1_1OBIsotopeTable.shtml#ae59fef8af62e52629bf2576e34a26801">OBIsotopeTable::ParseLine()</a>, <a class="el" href="classOpenBabel_1_1OBTypeTable.shtml#ae59fef8af62e52629bf2576e34a26801">OBTypeTable::ParseLine()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#ac749cfb04173f6f35ef64b1ac1d87178">OBMol::PerceiveBondOrders()</a>, <a class="el" href="classOpenBabel_1_1OBChainsParser.shtml#ab4077f1ebf77386df177be76a63b6b10">OBChainsParser::PerceiveChains()</a>, <a class="el" href="classOpenBabel_1_1patty.shtml#ad52e9084efab7e27fbe7fe394612ca57">patty::read_rules()</a>, <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a2a5208bfd803385534526eea570bf6b0">OBMoleculeFormat::ReadChemObjectImpl()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a76d7d1bf8e0c05c19d5b5e991fd0ba2f">OBConversion::ReadFile()</a>, <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a2881c699e6a370c350ca135f51797839">OBMoleculeFormat::ReadNameIndex()</a>, <a class="el" href="classOpenBabel_1_1OBDescriptor.shtml#ac41e9b3233ce576c2e4c5b242767eaec">OBDescriptor::ReadStringFromFilter()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a6a45eddab233711eb4e432ed5657358f">OBConversion::RegisterOptionParam()</a>, <a class="el" href="classOpenBabel_1_1OBRotorList.shtml#a22bfb3d2f1e0787b0c1aabd0f0255226">OBRotorList::RemoveSymVals()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#afa417798ba7c13bf75a7ab04f2803cdb">OBMol::RenumberAtoms()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a7a6cf5e812be471e72ecac3ee5d0bc46">OBMol::Rotate()</a>, <a class="el" href="namespaceOpenBabel.shtml#a1e68658ca81568e214ebedb8f6c4bd10">OpenBabel::SafeOpen()</a>, <a class="el" href="classOpenBabel_1_1OBChiralData.shtml#ab2d7445256c698000dd2beab47a784e0">OBChiralData::SetAtom4Refs()</a>, <a class="el" href="classOpenBabel_1_1OBTypeTable.shtml#a9b40b242258cc488f341d06412a1fb89">OBTypeTable::SetFromType()</a>, <a class="el" href="classOpenBabel_1_1OBAtom.shtml#af7a144a4ef755d5cc31e0d2e47a2e84a">OBAtom::SetHybAndGeom()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a50a6320395d2466d277dc42f872c50f8">OBMol::SetInternalCoord()</a>, <a class="el" href="classOpenBabel_1_1OBBond.shtml#ac7d5e7adb0a537d92a628c811148dc21">OBBond::SetLength()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a501e76993e9deb8ec8ab24c464d4ed3c">OBMol::SetTorsion()</a>, <a class="el" href="classOpenBabel_1_1OBTypeTable.shtml#aeb07d37f2d18888127964d11e28c1c12">OBTypeTable::SetToType()</a>, <a class="el" href="classOpenBabel_1_1OBRotorList.shtml#a85e63dfcf5b43e5ae867815f0398c87e">OBRotorList::Setup()</a>, <a class="el" href="classOpenBabel_1_1OBSmartsPattern.shtml#a41f4684ab61bddd674bda41fff7bac07">OBSmartsPattern::SMARTSError()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a6d03ef3f811fa2c085694ccbf76051d4">OBMol::start_kekulize()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a89743304090380b06c920530f919a2fe">OBMol::StripSalts()</a>, <a class="el" href="classOpenBabel_1_1obLogBuf.shtml#a553fc1343cc7a747775864d1d124a5d5">obLogBuf::sync()</a>, <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a40f9d382b5453a4cbf744c9be7f98ab2">OBMessageHandler::ThrowError()</a>, <a class="el" href="namespaceOpenBabel.shtml#a32ba50e0b43cb1dfdf1978d1e72099c5">OpenBabel::ThrowError()</a>, <a class="el" href="classOpenBabel_1_1OBTetraNonPlanarStereo.shtml#ac6f1bf41e38b3e8b182fa57269046070">OBTetraNonPlanarStereo::ToConfig()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#a751725f02bf62696515d79608198cd59">OBMol::ToInertialFrame()</a>, <a class="el" href="classOpenBabel_1_1OBTypeTable.shtml#a613e0ea0da4b4b0d26ea29439e3554a8">OBTypeTable::Translate()</a>, <a class="el" href="classOpenBabel_1_1OBMol.shtml#adad8d93db1fadf354b6f51687335fcb9">OBMol::Translate()</a>, <a class="el" href="classOpenBabel_1_1patty.shtml#af574984ee6ea81537b5af994f7f590df">patty::type_to_int()</a>, <a class="el" href="classOpenBabel_1_1OBAlign.shtml#a3748ab33ffd81acda5060963bdae971a">OBAlign::UpdateCoords()</a>, <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a9c04a77825af89227b6f83f19909d01d">OBMoleculeFormat::WriteChemObjectImpl()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#ad17f0a96643dec6840eda76c07a54698">OBConversion::WriteFile()</a>, and <a class="el" href="classOpenBabel_1_1FastSearchIndexer.shtml#a4ad5fb826838fc07d9bee2c09b5ef039">FastSearchIndexer::~FastSearchIndexer()</a>.</p>
</div>
</div>
<a class="anchor" id="a40f9d382b5453a4cbf744c9be7f98ab2"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::ThrowError" ref="a40f9d382b5453a4cbf744c9be7f98ab2" args="(const std::string &method, const std::string &errorMsg, obMessageLevel level=obDebug, errorQualifier qualifier=always)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void ThrowError </td>
<td>(</td>
<td class="paramtype">const std::string & </td>
<td class="paramname"><em>method</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">const std::string & </td>
<td class="paramname"><em>errorMsg</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype"><a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> </td>
<td class="paramname"><em>level</em> = <code>obDebug</code>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype"><a class="el" href="namespaceOpenBabel.shtml#a91e6912277f7537a670952698f7b2d82">errorQualifier</a> </td>
<td class="paramname"><em>qualifier</em> = <code>always</code> </td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Throw an error in the specified method with an appropriate level. </p>
</div>
</div>
<a class="anchor" id="aaacf3302e7348bab13284a1336040240"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetMessagesOfLevel" ref="aaacf3302e7348bab13284a1336040240" args="(const obMessageLevel)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">std::vector< std::string > GetMessagesOfLevel </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> </td>
<td class="paramname"><em>level</em></td><td>)</td>
<td></td>
</tr>
</table>
</div>
<div class="memdoc">
<dl class="return"><dt><b>Returns:</b></dt><dd>all messages matching a specified level </dd></dl>
</div>
</div>
<a class="anchor" id="a2ddeff91a6a4f113be67243d32aae4f0"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::StartLogging" ref="a2ddeff91a6a4f113be67243d32aae4f0" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void StartLogging </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Start logging messages (default) </p>
</div>
</div>
<a class="anchor" id="a08d309e66bc4091df861de396b6dd4a4"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::StopLogging" ref="a08d309e66bc4091df861de396b6dd4a4" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void StopLogging </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Stop logging messages completely. </p>
</div>
</div>
<a class="anchor" id="a77f52cdbd233a78a86a17fdbc5b1aeba"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::SetMaxLogEntries" ref="a77f52cdbd233a78a86a17fdbc5b1aeba" args="(unsigned int max)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void SetMaxLogEntries </td>
<td>(</td>
<td class="paramtype">unsigned int </td>
<td class="paramname"><em>max</em></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Set the maximum number of entries (or 0 for no limit) </p>
</div>
</div>
<a class="anchor" id="ad5cc775d9bcbe374ba8e3a7706441187"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetMaxLogEntries" ref="ad5cc775d9bcbe374ba8e3a7706441187" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">unsigned int GetMaxLogEntries </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<dl class="return"><dt><b>Returns:</b></dt><dd>the current maximum number of entries (default = 0 for no limit) </dd></dl>
</div>
</div>
<a class="anchor" id="af69ea3bc45568000475c11f584bd6506"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::ClearLog" ref="af69ea3bc45568000475c11f584bd6506" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void ClearLog </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Clear the current message log entirely. </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a9d12b0f7f38951d2d1065fc7ddae4229">OBConversion::FullConvert()</a>.</p>
</div>
</div>
<a class="anchor" id="ae467fbd6fca625ae5ee0ea066810280f"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::SetOutputLevel" ref="ae467fbd6fca625ae5ee0ea066810280f" args="(const obMessageLevel level)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void SetOutputLevel </td>
<td>(</td>
<td class="paramtype">const <a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> </td>
<td class="paramname"><em>level</em></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Set the level of messages to output (i.e., messages with at least this priority will be output) </p>
</div>
</div>
<a class="anchor" id="a3e6a1f72967b7b5e99d6a25cdde2fe34"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetOutputLevel" ref="a3e6a1f72967b7b5e99d6a25cdde2fe34" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> GetOutputLevel </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<dl class="return"><dt><b>Returns:</b></dt><dd>the current output level </dd></dl>
</div>
</div>
<a class="anchor" id="a8d5a7033d340808ae4eb4602a6f638de"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::SetOutputStream" ref="a8d5a7033d340808ae4eb4602a6f638de" args="(std::ostream *os)" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">void SetOutputStream </td>
<td>(</td>
<td class="paramtype">std::ostream * </td>
<td class="paramname"><em>os</em></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
</div>
</div>
<a class="anchor" id="afa3e05fe5fa00cc48db4a2b5b5f3ba95"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetOutputStream" ref="afa3e05fe5fa00cc48db4a2b5b5f3ba95" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">std::ostream* GetOutputStream </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
</div>
</div>
<a class="anchor" id="ab7822d9b9f26fac754fa79efab0dfcaf"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::StartErrorWrap" ref="ab7822d9b9f26fac754fa79efab0dfcaf" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">bool StartErrorWrap </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Start "wrapping" messages to cerr into ThrowError calls. </p>
</div>
</div>
<a class="anchor" id="ac846e5a1ffd589891812b87e129b1a67"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::StopErrorWrap" ref="ac846e5a1ffd589891812b87e129b1a67" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">bool StopErrorWrap </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Turn off "wrapping" messages, restoring normal cerr use (default) </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a4cc3bdf8e84224428a5bde1179b8cc60">OBMessageHandler::~OBMessageHandler()</a>.</p>
</div>
</div>
<a class="anchor" id="a43dbb5cf7a6a8e51944720b532ebf0a3"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetErrorMessageCount" ref="a43dbb5cf7a6a8e51944720b532ebf0a3" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">unsigned int GetErrorMessageCount </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<dl class="return"><dt><b>Returns:</b></dt><dd>Count of messages received at the obError level </dd></dl>
</div>
</div>
<a class="anchor" id="ad8c74030fe5436581bebd5c42af17bc5"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetWarningMessageCount" ref="ad8c74030fe5436581bebd5c42af17bc5" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">unsigned int GetWarningMessageCount </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<dl class="return"><dt><b>Returns:</b></dt><dd>Count of messages received at the obWarning level </dd></dl>
</div>
</div>
<a class="anchor" id="a00c4e7133ee9e7290c0002445789c1c6"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetInfoMessageCount" ref="a00c4e7133ee9e7290c0002445789c1c6" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">unsigned int GetInfoMessageCount </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<dl class="return"><dt><b>Returns:</b></dt><dd>Count of messages received at the obInfo level </dd></dl>
</div>
</div>
<a class="anchor" id="a48866a67a47b80b0d0c6adf5267e72eb"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetAuditMessageCount" ref="a48866a67a47b80b0d0c6adf5267e72eb" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">unsigned int GetAuditMessageCount </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<dl class="return"><dt><b>Returns:</b></dt><dd>Count of messages received at the obAuditMsg level </dd></dl>
</div>
</div>
<a class="anchor" id="a673ec0e1a1c14ca7117e07a90efcd8ee"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetDebugMessageCount" ref="a673ec0e1a1c14ca7117e07a90efcd8ee" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">unsigned int GetDebugMessageCount </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<dl class="return"><dt><b>Returns:</b></dt><dd>Count of messages received at the obDebug level </dd></dl>
</div>
</div>
<a class="anchor" id="ab58fc0b88f40b7dca684dfad13d587b7"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::GetMessageSummary" ref="ab58fc0b88f40b7dca684dfad13d587b7" args="()" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">string GetMessageSummary </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
</table>
</div>
<div class="memdoc">
<dl class="return"><dt><b>Returns:</b></dt><dd>Summary of messages received at all levels </dd></dl>
</div>
</div>
<hr/><h2>Member Data Documentation</h2>
<a class="anchor" id="a5812cd4eb01367908022f9ef86e49ec6"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::_messageCount" ref="a5812cd4eb01367908022f9ef86e49ec6" args="[5]" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">unsigned int <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a5812cd4eb01367908022f9ef86e49ec6">_messageCount</a>[5]<code> [protected]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Count of messages at each message level. </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ab58fc0b88f40b7dca684dfad13d587b7">OBMessageHandler::GetMessageSummary()</a>, <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a5cce70bc2fc932b31d3f31bda5900414">OBMessageHandler::OBMessageHandler()</a>, and <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a2482566201934523c4631d85b1214a70">OBMessageHandler::ThrowError()</a>.</p>
</div>
</div>
<a class="anchor" id="a08ea2212aebb85ea22895ec49bd81f85"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::_messageList" ref="a08ea2212aebb85ea22895ec49bd81f85" args="" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">std::deque<<a class="el" href="classOpenBabel_1_1OBError.shtml">OBError</a>> <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a08ea2212aebb85ea22895ec49bd81f85">_messageList</a><code> [protected]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Log of messages for later retrieval via <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#aaacf3302e7348bab13284a1336040240">GetMessagesOfLevel()</a> </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#aaacf3302e7348bab13284a1336040240">OBMessageHandler::GetMessagesOfLevel()</a>, and <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a2482566201934523c4631d85b1214a70">OBMessageHandler::ThrowError()</a>.</p>
</div>
</div>
<a class="anchor" id="abddad1d062682a33800f8d048a1e35f6"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::_outputLevel" ref="abddad1d062682a33800f8d048a1e35f6" args="" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname"><a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#abddad1d062682a33800f8d048a1e35f6">_outputLevel</a><code> [protected]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Filtering level for messages and logging (messages of lower priority will be ignored. </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a2482566201934523c4631d85b1214a70">OBMessageHandler::ThrowError()</a>.</p>
</div>
</div>
<a class="anchor" id="adff5b7b50cde9f6620dc08128df860c4"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::_outputStream" ref="adff5b7b50cde9f6620dc08128df860c4" args="" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">std::ostream* <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#adff5b7b50cde9f6620dc08128df860c4">_outputStream</a><code> [protected]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a2482566201934523c4631d85b1214a70">OBMessageHandler::ThrowError()</a>.</p>
</div>
</div>
<a class="anchor" id="a3c4c6fad78b988cdc4fc9b7ade5e788c"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::_logging" ref="a3c4c6fad78b988cdc4fc9b7ade5e788c" args="" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">bool <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a3c4c6fad78b988cdc4fc9b7ade5e788c">_logging</a><code> [protected]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>Whether messages will be logged into _messageList. </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a2482566201934523c4631d85b1214a70">OBMessageHandler::ThrowError()</a>.</p>
</div>
</div>
<a class="anchor" id="a7a0d2d55c1de9a5afc3bf71abedfdddd"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::_maxEntries" ref="a7a0d2d55c1de9a5afc3bf71abedfdddd" args="" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">unsigned int <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a7a0d2d55c1de9a5afc3bf71abedfdddd">_maxEntries</a><code> [protected]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>The maximum size of _messageList log. </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a2482566201934523c4631d85b1214a70">OBMessageHandler::ThrowError()</a>.</p>
</div>
</div>
<a class="anchor" id="a3e0837dfabcca64b1bdf2392e70b3228"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::_inWrapStreamBuf" ref="a3e0837dfabcca64b1bdf2392e70b3228" args="" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">std::streambuf* <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a3e0837dfabcca64b1bdf2392e70b3228">_inWrapStreamBuf</a><code> [protected]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>The default stream buffer for the output stream (saved if wrapping is ued) </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a5cce70bc2fc932b31d3f31bda5900414">OBMessageHandler::OBMessageHandler()</a>, <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ab7822d9b9f26fac754fa79efab0dfcaf">OBMessageHandler::StartErrorWrap()</a>, and <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ac846e5a1ffd589891812b87e129b1a67">OBMessageHandler::StopErrorWrap()</a>.</p>
</div>
</div>
<a class="anchor" id="a9285cdb5ae08c9a33cd6d6998cd69a26"></a><!-- doxytag: member="OpenBabel::OBMessageHandler::_filterStreamBuf" ref="a9285cdb5ae08c9a33cd6d6998cd69a26" args="" -->
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">std::streambuf* <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a9285cdb5ae08c9a33cd6d6998cd69a26">_filterStreamBuf</a><code> [protected]</code></td>
</tr>
</table>
</div>
<div class="memdoc">
<p>The filtered <a class="el" href="classOpenBabel_1_1obLogBuf.shtml" title="A minimal streambuf derivative to wrap calls to cerr into calls to OBMessageHandler as needed...">obLogBuf</a> stream buffer to wrap error messages. </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a5cce70bc2fc932b31d3f31bda5900414">OBMessageHandler::OBMessageHandler()</a>, <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#ab7822d9b9f26fac754fa79efab0dfcaf">OBMessageHandler::StartErrorWrap()</a>, and <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml#a4cc3bdf8e84224428a5bde1179b8cc60">OBMessageHandler::~OBMessageHandler()</a>.</p>
</div>
</div>
<hr/>The documentation for this class was generated from the following files:<ul>
<li><a class="el" href="oberror_8h_source.shtml">oberror.h</a></li>
<li><a class="el" href="oberror_8cpp.shtml">oberror.cpp</a></li>
</ul>
</div>
<!-- window showing the filter options -->
<div id="MSearchSelectWindow"
onmouseover="return searchBox.OnSearchSelectShow()"
onmouseout="return searchBox.OnSearchSelectHide()"
onkeydown="return searchBox.OnSearchSelectKey(event)">
<a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(0)"><span class="SelectionMark"> </span>All</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(1)"><span class="SelectionMark"> </span>Classes</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(2)"><span class="SelectionMark"> </span>Namespaces</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(3)"><span class="SelectionMark"> </span>Files</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(4)"><span class="SelectionMark"> </span>Functions</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(5)"><span class="SelectionMark"> </span>Variables</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(6)"><span class="SelectionMark"> </span>Typedefs</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(7)"><span class="SelectionMark"> </span>Enumerations</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(8)"><span class="SelectionMark"> </span>Enumerator</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(9)"><span class="SelectionMark"> </span>Friends</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(10)"><span class="SelectionMark"> </span>Defines</a></div>
<!-- iframe showing the search results (closed by default) -->
<div id="MSearchResultsWindow">
<iframe src="javascript:void(0)" frameborder="0"
name="MSearchResults" id="MSearchResults">
</iframe>
</div>
</div><!-- end content -->
<!--#include file="footer.html" -->
<div id="footer">
<hr size="1">
<img src="http://openbabel.org/babel256.png" width="136" height="127" alt="" style="float: left;" />
<p>This file is part of the documentation for <a href="http://openbabel.org/wiki/">Open Babel</a>, version 2.3.</p>
<div class="bottom">
Documentation copyright © 1998-2007, the <a href="http://openbabel.org/wiki/THANKS">Open Babel Developers</a>.<br>
Open Babel is hosted by: <a href="http://sourceforge.net">
<img src="http://sourceforge.net/sflogo.php?group_id=40728"
width="88" height="31" border="0" alt="SourceForge Logo"></a><br>
Generated on Thu Oct 13 2011 16:08:10 by <a href="http://www.doxygen.org/"><img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.7.5.1.
</div>
</body>
</html>
|