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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<title>XMLBaseFormat Class Reference</title>
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<li class="navelem"><a class="el" href="namespaceOpenBabel.shtml">OpenBabel</a> </li>
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<div class="header">
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<a href="#pub-types">Public Types</a> |
<a href="#pub-methods">Public Member Functions</a> |
<a href="#pub-static-methods">Static Public Member Functions</a> |
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<!-- doxytag: class="OpenBabel::XMLBaseFormat" --><!-- doxytag: inherits="OpenBabel::OBFormat" -->
<p><code>#include <<a class="el" href="xml_8h_source.shtml">openbabel/xml.h</a>></code></p>
<div class="dynheader">
Inheritance diagram for XMLBaseFormat:</div>
<div class="dyncontent">
<div class="center"><img src="classOpenBabel_1_1XMLBaseFormat__inherit__graph.png" border="0" usemap="#XMLBaseFormat_inherit__map" alt="Inheritance graph"/></div>
<map name="XMLBaseFormat_inherit__map" id="XMLBaseFormat_inherit__map">
<area shape="rect" id="node7" href="classOpenBabel_1_1XMLMoleculeFormat.shtml" title="Abstract class for XML formats which represent molecules." alt="" coords="5,237,165,267"/><area shape="rect" id="node2" href="classOpenBabel_1_1OBFormat.shtml" title="Base class for file formats." alt="" coords="40,83,131,112"/><area shape="rect" id="node4" href="classOpenBabel_1_1OBPlugin.shtml" title="Base class for all types of dynamic classes discovered at runtime." alt="" coords="44,5,127,35"/></map>
<center><span class="legend">[<a href="graph_legend.shtml">legend</a>]</span></center></div>
<p><a href="classOpenBabel_1_1XMLBaseFormat-members.shtml">List of all members.</a></p>
<table class="memberdecls">
<tr><td colspan="2"><h2><a name="pub-types"></a>
Public Types</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">typedef std::map< const char <br class="typebreak"/>
*, <a class="el" href="classOpenBabel_1_1OBPlugin.shtml">OBPlugin</a> *, <a class="el" href="structOpenBabel_1_1CharPtrLess.shtml">CharPtrLess</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga0fd3c807ed3341c33070c93b14739bc8">PluginMapType</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">typedef <br class="typebreak"/>
PluginMapType::const_iterator </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga8fac85f5497f873a2dd8734b47f0bdc0">PluginIterator</a></td></tr>
<tr><td colspan="2"><h2><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a429ba96990b23caaca913a23345f3793">~XMLBaseFormat</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#ab3d80dde715e0505ef1818a621ecd888">NamespaceURI</a> () const =0</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a6b007f43192f527944eef5136e4b2703">DoElement</a> (const std::string &ElName)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a0e59feda5d3eb85765b53cf4b42f77ef">EndElement</a> (const std::string &ElName)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#ad2f75af8aac19e5c3c48dc26c1fa319c">EndTag</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a45db88b29eb37e9dd105bf4032e421d2">TypeID</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a1e309febfaef70cc3c8d98afc1540931">ReadMolecule</a> (<a class="el" href="classOpenBabel_1_1OBBase.shtml">OBBase</a> *, <a class="el" href="classOpenBabel_1_1OBConversion.shtml">OBConversion</a> *)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a6044ced825a2a83b7cfe7c45eea63c99">ReadChemObject</a> (<a class="el" href="classOpenBabel_1_1OBConversion.shtml">OBConversion</a> *)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a663171ec9788e2d1621d374848b3888b">WriteMolecule</a> (<a class="el" href="classOpenBabel_1_1OBBase.shtml">OBBase</a> *, <a class="el" href="classOpenBabel_1_1OBConversion.shtml">OBConversion</a> *)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a5ea5d9623cd9594549a52e116caecaa2">WriteChemObject</a> (<a class="el" href="classOpenBabel_1_1OBConversion.shtml">OBConversion</a> *)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#ab87525f269e7819d8462f450d30d56a7">Description</a> ()=0</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a1870e0d80a223ef4e1661be80029dbec">TargetClassDescription</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual const std::type_info & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a73f632a573cbbfecf9e00f04c5ce73e9">GetType</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a1d3a8785a0ad0c85b98fa3406a64d50f">SpecificationURL</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a0e10219d8aedefa78ef16fc7fded85ec">GetMIMEType</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual unsigned int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a94a94537cc5ba96b1876db1b612b91a3">Flags</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classOpenBabel_1_1OBFormat.shtml">OBFormat</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a0924b1a442d147fa036bff23a4cf04ef">MakeNewInstance</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#a47a434f63a789f142966304e35aa6952">RegisterFormat</a> (const char *ID, const char *MIME=NULL)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#ae0859fdbf134af95a8231eb32c73b7db">Display</a> (std::string &txt, const char *param, const char *ID=NULL)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classOpenBabel_1_1OBPlugin.shtml">OBPlugin</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga9399e9568ab809d714385f1b237a9335">MakeInstance</a> (const std::vector< std::string > &)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga3e0b39e1326de703012f81ac2be7feba">Init</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga753a34173c6750388d33e5294556790f">GetID</a> () const </td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="group__plugins.shtml#ga0fd3c807ed3341c33070c93b14739bc8">PluginMapType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#gaabc1385cbe63145ffec6edf1f2c3be98">GetMap</a> () const =0</td></tr>
<tr><td colspan="2"><h2><a name="pub-static-methods"></a>
Static Public Member Functions</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static <a class="el" href="classOpenBabel_1_1OBFormat.shtml">OBFormat</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBFormat.shtml#aca0c09ee719aba9da34cb281aa0db6a5">FormatFromMIME</a> (const char *MIME)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static <a class="el" href="classOpenBabel_1_1OBPlugin.shtml">OBPlugin</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga295dc7f1b94da710821c562bff3e7c97">GetPlugin</a> (const char *Type, const char *ID)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static bool </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#gaf95953a5793333ba51e978c4a0a00103">ListAsVector</a> (const char *PluginID, const char *param, std::vector< std::string > &vlist)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static void </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga9fabfd2513038ae6ac475ac0ff2c73cd">List</a> (const char *PluginID, const char *param=NULL, std::ostream *os=&std::cout)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#gaba22c5352d36c7f058299af7ddffb03e">ListAsString</a> (const char *PluginID, const char *param=NULL)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga84fc973fdf4bba5a6b0e2d402077991c">FirstLine</a> (const char *txt)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static <a class="el" href="group__plugins.shtml#ga8fac85f5497f873a2dd8734b47f0bdc0">PluginIterator</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga1d4d73999ab0518ee471c635bd0a7e87">Begin</a> (const char *PluginID)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static <a class="el" href="group__plugins.shtml#ga8fac85f5497f873a2dd8734b47f0bdc0">PluginIterator</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga9a330280c1cd2e7119dac87a6fd0b762">End</a> (const char *PluginID)</td></tr>
<tr><td colspan="2"><h2><a name="pro-methods"></a>
Protected Member Functions</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">xmlTextReaderPtr </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a9d9e2a08b0659f0bc93d3eb7eaf8f05d">reader</a> () const </td></tr>
<tr><td class="memItemLeft" align="right" valign="top">xmlTextWriterPtr </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a9569f81d2916200422a7927572913336">writer</a> () const </td></tr>
<tr><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a4964d8defcb0f638a51963d436188f12">OutputToStream</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#adfcd8e84805c262d8cbca79a83f9d4cc">SkipObjects</a> (int n, <a class="el" href="classOpenBabel_1_1OBConversion.shtml">OBConversion</a> *pConv)</td></tr>
<tr><td colspan="2"><h2><a name="pro-static-methods"></a>
Static Protected Member Functions</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static <a class="el" href="group__plugins.shtml#ga0fd3c807ed3341c33070c93b14739bc8">PluginMapType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#gac40457336d7b12bb632b4ac4e8955a3a">PluginMap</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static <a class="el" href="group__plugins.shtml#ga0fd3c807ed3341c33070c93b14739bc8">PluginMapType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#gadfcf9fda27cfbc4301fc94517a4250ef">GetTypeMap</a> (const char *PluginID)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">static <a class="el" href="classOpenBabel_1_1OBPlugin.shtml">OBPlugin</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga1e58b1811ec8c1b88254ee46ccef0b78">BaseFindType</a> (<a class="el" href="group__plugins.shtml#ga0fd3c807ed3341c33070c93b14739bc8">PluginMapType</a> &Map, const char *ID)</td></tr>
<tr><td colspan="2"><h2><a name="pro-attribs"></a>
Protected Attributes</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenBabel_1_1XMLConversion.shtml">XMLConversion</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#ab50420582d1794a71702ae17e176dc07">_pxmlConv</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a5fd9fbe1a6ecd9798543ec2a55c472a8">_prefix</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a5e2c3ec36cd04bac7ecad43b9f5501a2">baseindent</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a4b00721003b8d35559a55c9098ff36c5">ind</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a8000c477c493f1dc954e8a538ae6fda8">nsdecl</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#ac0224265e7d214b7ed98e091fe559c88">_embedlevel</a></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="group__plugins.shtml#ga1f8d25dafb0bc13814ca451035f67955">_id</a></td></tr>
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<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
<div class="textblock"><p>Abstract class containing common functionality for XML formats. </p>
</div><hr/><h2>Constructor & Destructor Documentation</h2>
<a class="anchor" id="a429ba96990b23caaca913a23345f3793"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::~XMLBaseFormat" ref="a429ba96990b23caaca913a23345f3793" args="()" -->
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<td class="memname">~<a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml">XMLBaseFormat</a> </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline]</code></td>
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<hr/><h2>Member Function Documentation</h2>
<a class="anchor" id="ab3d80dde715e0505ef1818a621ecd888"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::NamespaceURI" ref="ab3d80dde715e0505ef1818a621ecd888" args="() const =0" -->
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<td class="memname">virtual const char* NamespaceURI </td>
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<td> const<code> [pure virtual]</code></td>
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<a class="anchor" id="a6b007f43192f527944eef5136e4b2703"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::DoElement" ref="a6b007f43192f527944eef5136e4b2703" args="(const std::string &ElName)" -->
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<td class="memname">virtual bool DoElement </td>
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<td class="paramtype">const std::string & </td>
<td class="paramname"><em>ElName</em></td><td>)</td>
<td><code> [inline, virtual]</code></td>
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<a class="anchor" id="a0e59feda5d3eb85765b53cf4b42f77ef"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::EndElement" ref="a0e59feda5d3eb85765b53cf4b42f77ef" args="(const std::string &ElName)" -->
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<td class="memname">virtual bool EndElement </td>
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<td class="paramtype">const std::string & </td>
<td class="paramname"><em>ElName</em></td><td>)</td>
<td><code> [inline, virtual]</code></td>
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<a class="anchor" id="ad2f75af8aac19e5c3c48dc26c1fa319c"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::EndTag" ref="ad2f75af8aac19e5c3c48dc26c1fa319c" args="()" -->
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<td class="memname">virtual const char* EndTag </td>
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<td><code> [inline, virtual]</code></td>
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<p>The tag at the end of the chemical object e.g. "/molecule>". </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#adfcd8e84805c262d8cbca79a83f9d4cc">XMLBaseFormat::SkipObjects()</a>.</p>
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<a class="anchor" id="a9d9e2a08b0659f0bc93d3eb7eaf8f05d"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::reader" ref="a9d9e2a08b0659f0bc93d3eb7eaf8f05d" args="() const " -->
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<td class="memname">xmlTextReaderPtr reader </td>
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<td> const<code> [inline, protected]</code></td>
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<a class="anchor" id="a9569f81d2916200422a7927572913336"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::writer" ref="a9569f81d2916200422a7927572913336" args="() const " -->
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<td class="memname">xmlTextWriterPtr writer </td>
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<td> const<code> [inline, protected]</code></td>
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<a class="anchor" id="a4964d8defcb0f638a51963d436188f12"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::OutputToStream" ref="a4964d8defcb0f638a51963d436188f12" args="()" -->
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<td class="memname">void OutputToStream </td>
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<td><code> [inline, protected]</code></td>
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<a class="anchor" id="adfcd8e84805c262d8cbca79a83f9d4cc"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::SkipObjects" ref="adfcd8e84805c262d8cbca79a83f9d4cc" args="(int n, OBConversion *pConv)" -->
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<td class="memname">virtual int SkipObjects </td>
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<td class="paramname"><em>n</em>, </td>
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<td></td>
<td class="paramtype"><a class="el" href="classOpenBabel_1_1OBConversion.shtml">OBConversion</a> * </td>
<td class="paramname"><em>pConv</em> </td>
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<p>Skip past first n objects in input stream (or current one with n=0) Returns 1 on success, -1 on error and 0 if not implemented </p>
<p>Reimplemented from <a class="el" href="classOpenBabel_1_1OBFormat.shtml#a1f0ee7ba19cc62b53a7ee06fa4f91509">OBFormat</a>.</p>
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<a class="anchor" id="a45db88b29eb37e9dd105bf4032e421d2"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::TypeID" ref="a45db88b29eb37e9dd105bf4032e421d2" args="()" -->
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<td><code> [inline, virtual, inherited]</code></td>
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<p>Redefined by each plugin type: "formats", "fingerprints", etc. </p>
<p>Reimplemented from <a class="el" href="group__plugins.shtml#ga45dfda1fb13d3c26ab7f8f7631e3351c">OBPlugin</a>.</p>
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<a class="anchor" id="a1e309febfaef70cc3c8d98afc1540931"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::ReadMolecule" ref="a1e309febfaef70cc3c8d98afc1540931" args="(OBBase *, OBConversion *)" -->
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<td class="paramname">, </td>
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<td class="paramtype"><a class="el" href="classOpenBabel_1_1OBConversion.shtml">OBConversion</a> * </td>
<td class="paramname"> </td>
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<p>The "API" interface Read function. </p>
<p>Reads a single object. Does not make a new object on the heap; can be used with a pointer to an chem object on the heap or the stack. </p>
<p>Reimplemented in <a class="el" href="classOpenBabel_1_1XMLMoleculeFormat.shtml#a5a3cd5ffc0d21fe9b95d804c44e7d146">XMLMoleculeFormat</a>.</p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a486c6525ca5f6e49f4c9a3905805b9a9">OBMoleculeFormat::DeferMolOutput()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a1204f9b613067a04ebfe881a58775918">OBConversion::Read()</a>, and <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a2a5208bfd803385534526eea570bf6b0">OBMoleculeFormat::ReadChemObjectImpl()</a>.</p>
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<td class="paramtype"><a class="el" href="classOpenBabel_1_1OBConversion.shtml">OBConversion</a> * </td>
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<p>The "Convert" interface Read function. </p>
<p>Possibly reads multiple new objects on the heap and subjects them to its DoTransformations() function, which may delete them again. Sends result to pConv->AddChemObject() </p>
<p>Reimplemented in <a class="el" href="classOpenBabel_1_1XMLMoleculeFormat.shtml#a9acd362b27e30c19a2c870ca71592723">XMLMoleculeFormat</a>, and <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a9acd362b27e30c19a2c870ca71592723">OBMoleculeFormat</a>.</p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a95c512f009bf277d9d6299d9f5d0c13d">OBConversion::Convert()</a>.</p>
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<p>The "API" interface Write function. </p>
<p>Writes a single object Does not delete the object; can be used with a pointer to an chem object on the heap or the stack. </p>
<dl class="return"><dt><b>Returns:</b></dt><dd>false on error. </dd></dl>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a5800be99903abff0efbad8937f492bc4">OBMoleculeFormat::DoOutputOptions()</a>, <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#aabcab4054392d585a1e3b2d108aead54">OBMoleculeFormat::OutputDeferredMols()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a3d46d682999a7772db31a835fa4a8091">OBConversion::Write()</a>, and <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a9c04a77825af89227b6f83f19909d01d">OBMoleculeFormat::WriteChemObjectImpl()</a>.</p>
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<a class="anchor" id="a5ea5d9623cd9594549a52e116caecaa2"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::WriteChemObject" ref="a5ea5d9623cd9594549a52e116caecaa2" args="(OBConversion *)" -->
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<td class="paramtype"><a class="el" href="classOpenBabel_1_1OBConversion.shtml">OBConversion</a> * </td>
<td class="paramname"></td><td>)</td>
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<p>The "Convert" interface Write function. </p>
<p>Writes a single object Deletes the object after writing </p>
<dl class="return"><dt><b>Returns:</b></dt><dd>false on error </dd></dl>
<p>Reimplemented in <a class="el" href="classOpenBabel_1_1XMLMoleculeFormat.shtml#a39c2aaf250dde6e85d05ff9357d8b003">XMLMoleculeFormat</a>, and <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a39c2aaf250dde6e85d05ff9357d8b003">OBMoleculeFormat</a>.</p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a342df96ba3cd8751e19758939dbef2f5">OBConversion::AddChemObject()</a>, and <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a95c512f009bf277d9d6299d9f5d0c13d">OBConversion::Convert()</a>.</p>
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<td><code> [pure virtual, inherited]</code></td>
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<p>Information on this format. Printed out in response to -Hxxx option where xxx id the id of the format. </p>
<p>Must be provided by each format class. Can include a list of command line Options. These may be used to construction check boxes, radio buttons etc for GUI interface. </p>
<p>Reimplemented from <a class="el" href="group__plugins.shtml#ga4a6b8d1611d5d963fc29982cc1ebcbf7">OBPlugin</a>.</p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBConversion.shtml#af0bee894a9ed7ca61637452dc2e264f2">OBConversion::GetNextFormat()</a>, <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a2a5208bfd803385534526eea570bf6b0">OBMoleculeFormat::ReadChemObjectImpl()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a6a45eddab233711eb4e432ed5657358f">OBConversion::RegisterOptionParam()</a>, and <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a9c04a77825af89227b6f83f19909d01d">OBMoleculeFormat::WriteChemObjectImpl()</a>.</p>
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<p>A decription of the chemical object converted by this format. </p>
<p>If not provided, the object type used by the default format is used (usually <a class="el" href="classOpenBabel_1_1OBMol.shtml" title="Molecule Class.">OBMol</a>). </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a1717ba1ed3f8131d7a0f3b0d6031f5af">OBConversion::ReportNumberConverted()</a>.</p>
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<dl class="return"><dt><b>Returns:</b></dt><dd>the type of chemical object used by the format. Defaults to that used by the default format. Useful for checking that a format can handle a particular object. </dd></dl>
<p>Reimplemented in <a class="el" href="classOpenBabel_1_1XMLMoleculeFormat.shtml#a54e576034bd51c66256aa6a98f81d644">XMLMoleculeFormat</a>, and <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a54e576034bd51c66256aa6a98f81d644">OBMoleculeFormat</a>.</p>
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<p>Web address where the format is defined. </p>
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<a class="anchor" id="a0e10219d8aedefa78ef16fc7fded85ec"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::GetMIMEType" ref="a0e10219d8aedefa78ef16fc7fded85ec" args="()" -->
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<td>(</td>
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<td><code> [inline, virtual, inherited]</code></td>
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<p>Chemical MIME type associated with this file type (if any) </p>
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<p>Decribes the capabilities of the format (Read only etc.) </p>
<p>Currently, can be a bitwise OR of any of the following NOTREADABLE READONEONLY NOTWRITABLE WRITEONEONLY DEFAULTFORMAT READBINARY WRITEBINARY READXML </p>
<p>Referenced by <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a342df96ba3cd8751e19758939dbef2f5">OBConversion::AddChemObject()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a95c512f009bf277d9d6299d9f5d0c13d">OBConversion::Convert()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a9d12b0f7f38951d2d1065fc7ddae4229">OBConversion::FullConvert()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#af0bee894a9ed7ca61637452dc2e264f2">OBConversion::GetNextFormat()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a3222302075fbfcfe842ebd0b984a4406">OBConversion::InstallStreamFilter()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a23aaa3e3be1f55323cd956b53f6b0417">OBConversion::OpenAndSetFormat()</a>, <a class="el" href="classOpenBabel_1_1OBMoleculeFormat.shtml#a2a5208bfd803385534526eea570bf6b0">OBMoleculeFormat::ReadChemObjectImpl()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a507df3dbfec4b9201387e70ef71fe8de">OBConversion::SetInFormat()</a>, <a class="el" href="classOpenBabel_1_1OBConversion.shtml#ae5b218e7427f7806d69356986e296160">OBConversion::SetOutFormat()</a>, and <a class="el" href="classOpenBabel_1_1OBConversion.shtml#ad17f0a96643dec6840eda76c07a54698">OBConversion::WriteFile()</a>.</p>
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<a class="anchor" id="a0924b1a442d147fa036bff23a4cf04ef"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::MakeNewInstance" ref="a0924b1a442d147fa036bff23a4cf04ef" args="()" -->
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<td class="memname">virtual <a class="el" href="classOpenBabel_1_1OBFormat.shtml">OBFormat</a>* MakeNewInstance </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td><code> [inline, virtual, inherited]</code></td>
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<dl class="return"><dt><b>Returns:</b></dt><dd>a pointer to a new instance of the format, or NULL if fails. Normally a single global instance is used but this may cause problems if there are member variables and the format is used in more than one place in the program. </dd></dl>
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<a class="anchor" id="a47a434f63a789f142966304e35aa6952"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::RegisterFormat" ref="a47a434f63a789f142966304e35aa6952" args="(const char *ID, const char *MIME=NULL)" -->
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<td class="memname">int RegisterFormat </td>
<td>(</td>
<td class="paramtype">const char * </td>
<td class="paramname"><em>ID</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">const char * </td>
<td class="paramname"><em>MIME</em> = <code>NULL</code> </td>
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<td></td>
<td>)</td>
<td></td><td><code> [inherited]</code></td>
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<p>Referenced by <a class="el" href="classOpenBabel_1_1OBConversion.shtml#a20a0d20f46d3b003d99d1f5822c2037d">OBConversion::RegisterFormat()</a>.</p>
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<a class="anchor" id="ae0859fdbf134af95a8231eb32c73b7db"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::Display" ref="ae0859fdbf134af95a8231eb32c73b7db" args="(std::string &txt, const char *param, const char *ID=NULL)" -->
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<td class="memname">bool Display </td>
<td>(</td>
<td class="paramtype">std::string & </td>
<td class="paramname"><em>txt</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">const char * </td>
<td class="paramname"><em>param</em>, </td>
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<td class="paramkey"></td>
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<td class="paramtype">const char * </td>
<td class="paramname"><em>ID</em> = <code>NULL</code> </td>
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<td>)</td>
<td></td><td><code> [virtual, inherited]</code></td>
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<p>Provides a description in txt of the format specified by itr. If param starts with "in", "read", "out" or "write" only the appropriate formats are output. The others return false. If param contains "verbose", the whole description is output. </p>
<p>Reimplemented from <a class="el" href="group__plugins.shtml#gae0859fdbf134af95a8231eb32c73b7db">OBPlugin</a>.</p>
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<a class="anchor" id="aca0c09ee719aba9da34cb281aa0db6a5"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::FormatFromMIME" ref="aca0c09ee719aba9da34cb281aa0db6a5" args="(const char *MIME)" -->
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<td class="memname"><a class="el" href="classOpenBabel_1_1OBFormat.shtml">OBFormat</a> * FormatFromMIME </td>
<td>(</td>
<td class="paramtype">const char * </td>
<td class="paramname"><em>MIME</em></td><td>)</td>
<td><code> [static, inherited]</code></td>
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<hr/><h2>Member Data Documentation</h2>
<a class="anchor" id="ab50420582d1794a71702ae17e176dc07"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::_pxmlConv" ref="ab50420582d1794a71702ae17e176dc07" args="" -->
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<td class="memname"><a class="el" href="classOpenBabel_1_1XMLConversion.shtml">XMLConversion</a>* <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#ab50420582d1794a71702ae17e176dc07">_pxmlConv</a><code> [protected]</code></td>
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<p>Referenced by <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a4964d8defcb0f638a51963d436188f12">XMLBaseFormat::OutputToStream()</a>, <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a9d9e2a08b0659f0bc93d3eb7eaf8f05d">XMLBaseFormat::reader()</a>, <a class="el" href="classOpenBabel_1_1XMLMoleculeFormat.shtml#a5a3cd5ffc0d21fe9b95d804c44e7d146">XMLMoleculeFormat::ReadMolecule()</a>, <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#adfcd8e84805c262d8cbca79a83f9d4cc">XMLBaseFormat::SkipObjects()</a>, and <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a9569f81d2916200422a7927572913336">XMLBaseFormat::writer()</a>.</p>
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<a class="anchor" id="a5fd9fbe1a6ecd9798543ec2a55c472a8"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::_prefix" ref="a5fd9fbe1a6ecd9798543ec2a55c472a8" args="" -->
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<td class="memname">std::string <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a5fd9fbe1a6ecd9798543ec2a55c472a8">_prefix</a><code> [protected]</code></td>
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<a class="anchor" id="a5e2c3ec36cd04bac7ecad43b9f5501a2"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::baseindent" ref="a5e2c3ec36cd04bac7ecad43b9f5501a2" args="" -->
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<td class="memname">int <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a5e2c3ec36cd04bac7ecad43b9f5501a2">baseindent</a><code> [protected]</code></td>
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<a class="anchor" id="a4b00721003b8d35559a55c9098ff36c5"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::ind" ref="a4b00721003b8d35559a55c9098ff36c5" args="" -->
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<td class="memname">int <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a4b00721003b8d35559a55c9098ff36c5">ind</a><code> [protected]</code></td>
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<a class="anchor" id="a8000c477c493f1dc954e8a538ae6fda8"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::nsdecl" ref="a8000c477c493f1dc954e8a538ae6fda8" args="" -->
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<td class="memname">std::string <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#a8000c477c493f1dc954e8a538ae6fda8">nsdecl</a><code> [protected]</code></td>
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<a class="anchor" id="ac0224265e7d214b7ed98e091fe559c88"></a><!-- doxytag: member="OpenBabel::XMLBaseFormat::_embedlevel" ref="ac0224265e7d214b7ed98e091fe559c88" args="" -->
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<td class="memname">int <a class="el" href="classOpenBabel_1_1XMLBaseFormat.shtml#ac0224265e7d214b7ed98e091fe559c88">_embedlevel</a><code> [protected]</code></td>
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<p>Referenced by <a class="el" href="classOpenBabel_1_1XMLMoleculeFormat.shtml#a5a3cd5ffc0d21fe9b95d804c44e7d146">XMLMoleculeFormat::ReadMolecule()</a>.</p>
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<hr/>The documentation for this class was generated from the following file:<ul>
<li><a class="el" href="xml_8h_source.shtml">xml.h</a></li>
</ul>
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