File: matrix3x3_8h.shtml

package info (click to toggle)
openbabel 2.3.2%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: jessie, jessie-kfreebsd
  • size: 75,308 kB
  • ctags: 41,952
  • sloc: cpp: 321,252; ansic: 89,228; python: 7,262; perl: 6,418; pascal: 793; sh: 194; xml: 97; ruby: 55; makefile: 47; java: 23
file content (156 lines) | stat: -rw-r--r-- 13,823 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html>
<head><meta http-equiv="Content-Type" content="text/html;charset=utf-8">
<title>matrix3x3.h File Reference</title>
<link href="/site.css" rel="stylesheet" type="text/css">
<link href="doxygen.css" rel="stylesheet" type="text/css">
<link href="tabs.css" rel="stylesheet" type="text/css">
<script type="text/javascript" src="search/search.js"></script>
<link href="search/search.css" rel="stylesheet" type="text/css"/>
</head>

<body>

<!--#include file="header.html" -->
<!-- Generated by Doxygen 1.7.5.1 -->
<script type="text/javascript">
var searchBox = new SearchBox("searchBox", "search",false,'Search');
</script>
  <div id="navrow1" class="tabs">
    <ul class="tablist">
      <li><a href="index.shtml"><span>Main&#160;Page</span></a></li>
      <li><a href="pages.shtml"><span>Related&#160;Pages</span></a></li>
      <li><a href="modules.shtml"><span>Modules</span></a></li>
      <li><a href="namespaces.shtml"><span>Namespaces</span></a></li>
      <li><a href="annotated.shtml"><span>Classes</span></a></li>
      <li class="current"><a href="files.shtml"><span>Files</span></a></li>
      <li><a href="examples.shtml"><span>Examples</span></a></li>
      <li>
        <div id="MSearchBox" class="MSearchBoxInactive">
        <span class="left">
          <img id="MSearchSelect" src="search/mag_sel.png"
               onmouseover="return searchBox.OnSearchSelectShow()"
               onmouseout="return searchBox.OnSearchSelectHide()"
               alt=""/>
          <input type="text" id="MSearchField" value="Search" accesskey="S"
               onfocus="searchBox.OnSearchFieldFocus(true)" 
               onblur="searchBox.OnSearchFieldFocus(false)" 
               onkeyup="searchBox.OnSearchFieldChange(event)"/>
          </span><span class="right">
            <a id="MSearchClose" href="javascript:searchBox.CloseResultsWindow()"><img id="MSearchCloseImg" border="0" src="search/close.png" alt=""/></a>
          </span>
        </div>
      </li>
    </ul>
  </div>
  <div id="navrow2" class="tabs2">
    <ul class="tablist">
      <li><a href="files.shtml"><span>File&#160;List</span></a></li>
      <li><a href="globals.shtml"><span>File&#160;Members</span></a></li>
    </ul>
  </div>
</div>
<div class="header">
  <div class="summary">
<a href="#nested-classes">Classes</a> &#124;
<a href="#namespaces">Namespaces</a> &#124;
<a href="#define-members">Defines</a> &#124;
<a href="#func-members">Functions</a>  </div>
  <div class="headertitle">
<div class="title">matrix3x3.h File Reference</div>  </div>
</div>
<div class="contents">
<div class="textblock"><code>#include &lt;ostream&gt;</code><br/>
<code>#include &lt;<a class="el" href="vector3_8h_source.shtml">openbabel/math/vector3.h</a>&gt;</code><br/>
<code>#include &lt;<a class="el" href="oberror_8h_source.shtml">openbabel/oberror.h</a>&gt;</code><br/>
</div><div class="textblock"><div class="dynheader">
This graph shows which files directly or indirectly include this file:</div>
<div class="dyncontent">
<div class="center"><img src="matrix3x3_8h__dep__incl.png" border="0" usemap="#matrix3x3_8hdep" alt=""/></div>
<map name="matrix3x3_8hdep" id="matrix3x3_8hdep">
<area shape="rect" id="node3" href="align_8h.shtml" title="Perform a least&#45;squares alignment of two molecules or two vectors of vector3 objects." alt="" coords="200,83,264,112"/><area shape="rect" id="node9" href="transform3d_8h.shtml" title="Handle 3D transformations in space groups." alt="" coords="293,83,408,112"/><area shape="rect" id="node15" href="atom_8cpp.shtml" title="Handle OBAtom class." alt="" coords="432,83,517,112"/><area shape="rect" id="node17" href="builder_8cpp.shtml" title="Handle OBBuilder class." alt="" coords="541,83,635,112"/><area shape="rect" id="node19" href="chiral_8cpp.shtml" title="Detect chiral atoms and molecules." alt="" coords="659,83,744,112"/><area shape="rect" id="node21" href="forcefield_8cpp.shtml" title="Handle OBForceField class." alt="" coords="768,83,880,112"/><area shape="rect" id="node23" href="generic_8cpp.shtml" title="Handle OBGenericData classes. Custom data for atoms, bonds, etc." alt="" coords="904,83,1003,112"/><area shape="rect" id="node25" href="mol_8cpp.shtml" title="Handle molecules. Implementation of OBMol." alt="" coords="1027,83,1101,112"/><area shape="rect" id="node27" href="obutil_8cpp.shtml" title="Various utility methods." alt="" coords="1125,83,1211,112"/><area shape="rect" id="node29" href="matrix3x3_8cpp.shtml" title="Handle 3D rotation matrix." alt="" coords="1235,83,1352,112"/><area shape="rect" id="node5" href="conformersearch_8cpp.shtml" title="Conformer searching using genetic algorithm." alt="" coords="5,160,168,189"/><area shape="rect" id="node7" href="align_8cpp.shtml" title="Handle 3D coordinates." alt="" coords="192,160,272,189"/><area shape="rect" id="node11" href="spacegroup_8h.shtml" title="Handle Crystallographic Space Groups." alt="" coords="296,160,405,189"/><area shape="rect" id="node13" href="transform3d_8cpp.shtml" title="Handle 3D transformations in space groups." alt="" coords="429,160,560,189"/></map>
</div>
</div>
<p><a href="matrix3x3_8h_source.shtml">Go to the source code of this file.</a></p>
<table class="memberdecls">
<tr><td colspan="2"><h2><a name="nested-classes"></a>
Classes</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">class &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1matrix3x3.shtml">matrix3x3</a></td></tr>
<tr><td class="mdescLeft">&#160;</td><td class="mdescRight">Represents a real 3x3 matrix.  <a href="classOpenBabel_1_1matrix3x3.shtml#details">More...</a><br/></td></tr>
<tr><td colspan="2"><h2><a name="namespaces"></a>
Namespaces</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">namespace &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenBabel.shtml">OpenBabel</a></td></tr>
<tr><td colspan="2"><h2><a name="define-members"></a>
Defines</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">#define&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="matrix3x3_8h.shtml#a89e47af0449640d4f15191aba5ca24c6">RAD_TO_DEG</a>&#160;&#160;&#160;(180.0/M_PI)</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">#define&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="matrix3x3_8h.shtml#a212460e743fecb084d717bb2180c5a56">DEG_TO_RAD</a>&#160;&#160;&#160;(M_PI/180.0)</td></tr>
<tr><td colspan="2"><h2><a name="func-members"></a>
Functions</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">vector3&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenBabel.shtml#af1a9769dcdfc9bb77a3747a3c89c3d03">center_coords</a> (double *, int)</td></tr>
</table>
<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
<div class="textblock"><p>Handle 3D Rotation matrix. </p>
</div><hr/><h2>Define Documentation</h2>
<a class="anchor" id="a89e47af0449640d4f15191aba5ca24c6"></a><!-- doxytag: member="matrix3x3.h::RAD_TO_DEG" ref="a89e47af0449640d4f15191aba5ca24c6" args="" -->
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname">#define RAD_TO_DEG&#160;&#160;&#160;(180.0/M_PI)</td>
        </tr>
      </table>
</div>
<div class="memdoc">

<p>Referenced by <a class="el" href="classOpenBabel_1_1OBBuilder.shtml#abe40cdbb1abc8939273d9cde6b7b638a">OBBuilder::Connect()</a>, <a class="el" href="classOpenBabel_1_1OBBuilder.shtml#ad0cefa50ad126c06c03bad33175ce2b4">OBBuilder::GetNewBondVector()</a>, <a class="el" href="classOpenBabel_1_1OBRotamerList.shtml#afd34dcbc8bd8c0fba2433b39f1e1d61b">OBRotamerList::Setup()</a>, <a class="el" href="namespaceOpenBabel.shtml#a00e2879019f2fb0fc689a7e5cb5d2008">OpenBabel::vectorAngle()</a>, <a class="el" href="classOpenBabel_1_1OBForceField.shtml#a66aab9d4399b8502d330872181f51429">OBForceField::VectorAngle()</a>, <a class="el" href="classOpenBabel_1_1OBForceField.shtml#afe981b8f96a737d0228fbf62c4c94417">OBForceField::VectorAngleDerivative()</a>, <a class="el" href="classOpenBabel_1_1OBForceField.shtml#af031c62775e4d3374c0504d7af515ee0">OBForceField::VectorOOP()</a>, <a class="el" href="classOpenBabel_1_1OBForceField.shtml#a4b7e7649d0928a2cb6a2123e3e4dec6f">OBForceField::VectorOOPDerivative()</a>, <a class="el" href="classOpenBabel_1_1OBForceField.shtml#a5a156d1eea0507509cbb7f245999a31b">OBForceField::VectorTorsion()</a>, and <a class="el" href="classOpenBabel_1_1OBForceField.shtml#a4d4709cf0de47e7c6f44da4e21f20c9f">OBForceField::VectorTorsionDerivative()</a>.</p>

</div>
</div>
<a class="anchor" id="a212460e743fecb084d717bb2180c5a56"></a><!-- doxytag: member="matrix3x3.h::DEG_TO_RAD" ref="a212460e743fecb084d717bb2180c5a56" args="" -->
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname">#define DEG_TO_RAD&#160;&#160;&#160;(M_PI/180.0)</td>
        </tr>
      </table>
</div>
<div class="memdoc">

<p>Referenced by <a class="el" href="classOpenBabel_1_1OBBuilder.shtml#abe40cdbb1abc8939273d9cde6b7b638a">OBBuilder::Connect()</a>, <a class="el" href="classOpenBabel_1_1OBBuilder.shtml#a6898b04c792072e4ace54885e9ff7b10">OBBuilder::CorrectStereoBonds()</a>, <a class="el" href="classOpenBabel_1_1OBForceField.shtml#a7b4196fee783bef9070d3d50ba91ff84">OBForceField::DistanceGeometry()</a>, <a class="el" href="classOpenBabel_1_1matrix3x3.shtml#aeae6ec0ae0d036137c03275be0010878">matrix3x3::FillOrth()</a>, <a class="el" href="classOpenBabel_1_1OBFFConstraints.shtml#ad5fd16d1e3dc861db030dab03b87f4e8">OBFFConstraints::GetConstraintEnergy()</a>, <a class="el" href="classOpenBabel_1_1OBBuilder.shtml#ad0cefa50ad126c06c03bad33175ce2b4">OBBuilder::GetNewBondVector()</a>, <a class="el" href="classOpenBabel_1_1OBRotorRules.shtml#ab7527366ed1bf39da7123e3ad65d96ad">OBRotorRules::GetRotorIncrements()</a>, <a class="el" href="namespaceOpenBabel.shtml#ae82e7b7b74e5212eada681c15afb77f4">OpenBabel::InternalToCartesian()</a>, <a class="el" href="classOpenBabel_1_1OBRotorRules.shtml#ae59fef8af62e52629bf2576e34a26801">OBRotorRules::ParseLine()</a>, <a class="el" href="classOpenBabel_1_1OBRotor.shtml#a9e776c30d29ce2b4832a9ae3dace64ea">OBRotor::RemoveSymTorsionValues()</a>, <a class="el" href="classOpenBabel_1_1OBRotorList.shtml#a22bfb3d2f1e0787b0c1aabd0f0255226">OBRotorList::RemoveSymVals()</a>, <a class="el" href="classOpenBabel_1_1matrix3x3.shtml#ae2b83cb7b73473405cd57594c88f541c">matrix3x3::RotAboutAxisByAngle()</a>, <a class="el" href="namespaceOpenBabel.shtml#a3d3039fda855c4c8c37c8345f0b51a64">OpenBabel::SetRotorToAngle()</a>, <a class="el" href="classOpenBabel_1_1matrix3x3.shtml#a99b052f9d6eaea593f20a032679bcc55">matrix3x3::SetupRotMat()</a>, and <a class="el" href="classOpenBabel_1_1OBForceField.shtml#a4d4709cf0de47e7c6f44da4e21f20c9f">OBForceField::VectorTorsionDerivative()</a>.</p>

</div>
</div>
</div>
<!-- window showing the filter options -->
<div id="MSearchSelectWindow"
     onmouseover="return searchBox.OnSearchSelectShow()"
     onmouseout="return searchBox.OnSearchSelectHide()"
     onkeydown="return searchBox.OnSearchSelectKey(event)">
<a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(0)"><span class="SelectionMark">&#160;</span>All</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(1)"><span class="SelectionMark">&#160;</span>Classes</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(2)"><span class="SelectionMark">&#160;</span>Namespaces</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(3)"><span class="SelectionMark">&#160;</span>Files</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(4)"><span class="SelectionMark">&#160;</span>Functions</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(5)"><span class="SelectionMark">&#160;</span>Variables</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(6)"><span class="SelectionMark">&#160;</span>Typedefs</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(7)"><span class="SelectionMark">&#160;</span>Enumerations</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(8)"><span class="SelectionMark">&#160;</span>Enumerator</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(9)"><span class="SelectionMark">&#160;</span>Friends</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(10)"><span class="SelectionMark">&#160;</span>Defines</a></div>

<!-- iframe showing the search results (closed by default) -->
<div id="MSearchResultsWindow">
<iframe src="javascript:void(0)" frameborder="0" 
        name="MSearchResults" id="MSearchResults">
</iframe>
</div>

</div><!-- end content -->

<!--#include file="footer.html" -->

<div id="footer">
<hr size="1">
<img src="http://openbabel.org/babel256.png" width="136" height="127" alt="" style="float: left;" />
<p>This file is part of the documentation for <a href="http://openbabel.org/wiki/">Open Babel</a>, version 2.3.</p>
<div class="bottom">
Documentation copyright &copy; 1998-2007, the <a href="http://openbabel.org/wiki/THANKS">Open Babel Developers</a>.<br>
Open Babel is hosted by: <a href="http://sourceforge.net">
<img src="http://sourceforge.net/sflogo.php?group_id=40728" 
width="88" height="31" border="0" alt="SourceForge Logo"></a><br>
Generated on Thu Oct 13 2011 16:08:08 by&nbsp;<a href="http://www.doxygen.org/"><img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.7.5.1.
</div>

</body>
</html>