1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138
|
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html>
<head><meta http-equiv="Content-Type" content="text/html;charset=utf-8">
<title>oberror.h File Reference</title>
<link href="/site.css" rel="stylesheet" type="text/css">
<link href="doxygen.css" rel="stylesheet" type="text/css">
<link href="tabs.css" rel="stylesheet" type="text/css">
<script type="text/javascript" src="search/search.js"></script>
<link href="search/search.css" rel="stylesheet" type="text/css"/>
</head>
<body>
<!--#include file="header.html" -->
<!-- Generated by Doxygen 1.7.5.1 -->
<script type="text/javascript">
var searchBox = new SearchBox("searchBox", "search",false,'Search');
</script>
<div id="navrow1" class="tabs">
<ul class="tablist">
<li><a href="index.shtml"><span>Main Page</span></a></li>
<li><a href="pages.shtml"><span>Related Pages</span></a></li>
<li><a href="modules.shtml"><span>Modules</span></a></li>
<li><a href="namespaces.shtml"><span>Namespaces</span></a></li>
<li><a href="annotated.shtml"><span>Classes</span></a></li>
<li class="current"><a href="files.shtml"><span>Files</span></a></li>
<li><a href="examples.shtml"><span>Examples</span></a></li>
<li>
<div id="MSearchBox" class="MSearchBoxInactive">
<span class="left">
<img id="MSearchSelect" src="search/mag_sel.png"
onmouseover="return searchBox.OnSearchSelectShow()"
onmouseout="return searchBox.OnSearchSelectHide()"
alt=""/>
<input type="text" id="MSearchField" value="Search" accesskey="S"
onfocus="searchBox.OnSearchFieldFocus(true)"
onblur="searchBox.OnSearchFieldFocus(false)"
onkeyup="searchBox.OnSearchFieldChange(event)"/>
</span><span class="right">
<a id="MSearchClose" href="javascript:searchBox.CloseResultsWindow()"><img id="MSearchCloseImg" border="0" src="search/close.png" alt=""/></a>
</span>
</div>
</li>
</ul>
</div>
<div id="navrow2" class="tabs2">
<ul class="tablist">
<li><a href="files.shtml"><span>File List</span></a></li>
<li><a href="globals.shtml"><span>File Members</span></a></li>
</ul>
</div>
</div>
<div class="header">
<div class="summary">
<a href="#nested-classes">Classes</a> |
<a href="#namespaces">Namespaces</a> |
<a href="#enum-members">Enumerations</a> </div>
<div class="headertitle">
<div class="title">oberror.h File Reference</div> </div>
</div>
<div class="contents">
<div class="textblock"><code>#include <openbabel/babelconfig.h></code><br/>
<code>#include <iosfwd></code><br/>
<code>#include <sstream></code><br/>
<code>#include <string></code><br/>
<code>#include <vector></code><br/>
<code>#include <deque></code><br/>
</div><div class="textblock"><div class="dynheader">
This graph shows which files directly or indirectly include this file:</div>
<div class="dyncontent">
<div class="center"><img src="oberror_8h__dep__incl.png" border="0" usemap="#oberror_8hdep" alt=""/></div>
<map name="oberror_8hdep" id="oberror_8hdep">
<area shape="rect" id="node3" href="mol_8h.shtml" title="Handle molecules. Declarations of OBMol, OBAtom, OBBond, OBResidue. (the main header for Open Babel)..." alt="" coords="1777,83,1836,112"/><area shape="rect" id="node99" href="obconversion_8h.shtml" title="Handle file conversions. Declaration of OBFormat, OBConversion." alt="" coords="3623,83,3745,112"/><area shape="rect" id="node105" href="matrix3x3_8h.shtml" title="Handle 3D Rotation matrix." alt="" coords="3109,160,3211,189"/><area shape="rect" id="node115" href="tetranonplanar_8h.shtml" title="Base class for handling and storing non-planar stereochemistry with 4 reference atom ids..." alt="" coords="3769,83,3903,112"/><area shape="rect" id="node117" href="bitvec_8cpp.shtml" title="Fast and efficient bitstring class." alt="" coords="3927,83,4020,112"/><area shape="rect" id="node119" href="descriptor_8cpp.shtml" title="Base class for molecular descriptors." alt="" coords="4044,83,4161,112"/><area shape="rect" id="node121" href="dlhandler__unix_8cpp.shtml" title="Dynamic loader for UNIX (handles file format shared obj.)" alt="" coords="4185,83,4329,112"/><area shape="rect" id="node123" href="fingerprint_8cpp.shtml" title="Definitions for OBFingerprint base class and fastsearch classes." alt="" coords="4353,83,4471,112"/><area shape="rect" id="node125" href="oberror_8cpp.shtml" title="Handle error messages, warnings, notices, etc. Implements OBMessageHandler class." alt="" coords="4495,83,4591,112"/><area shape="rect" id="node127" href="residue_8cpp.shtml" title="Handle macromolecule residues." alt="" coords="4615,83,4713,112"/><area shape="rect" id="node5" href="alias_8h.shtml" title="OBGenericData class to for atom alias data (e.g., in 2D drawing programs for "COOH")" alt="" coords="973,160,1035,189"/><area shape="rect" id="node7" href="generic_8cpp.shtml" title="Handle OBGenericData classes. Custom data for atoms, bonds, etc." alt="" coords="955,237,1053,267"/><area shape="rect" id="node9" href="builder_8h.shtml" title="Class to build 3D structures." alt="" coords="3235,160,3312,189"/><area shape="rect" id="node11" href="atom_8cpp.shtml" title="Handle OBAtom class." alt="" coords="3240,237,3325,267"/><area shape="rect" id="node13" href="builder_8cpp.shtml" title="Handle OBBuilder class." alt="" coords="3123,237,3216,267"/><area shape="rect" id="node15" href="mol_8cpp.shtml" title="Handle molecules. Implementation of OBMol." alt="" coords="2940,237,3015,267"/><area shape="rect" id="node17" href="conformersearch_8h.shtml" title="Conformer searching using genetic algorithm." alt="" coords="627,237,773,267"/><area shape="rect" id="node19" href="forcefield_8h.shtml" title="Handle forcefields." alt="" coords="5,237,101,267"/><area shape="rect" id="node21" href="forcefield_8cpp.shtml" title="Handle OBForceField class." alt="" coords="2260,315,2372,344"/><area shape="rect" id="node23" href="grid_8h.shtml" title="Handle grids of values." alt="" coords="189,160,248,189"/><area shape="rect" id="node26" href="grid_8cpp.shtml" title="Handle grids of values." alt="" coords="125,237,200,267"/><area shape="rect" id="node28" href="griddata_8cpp.shtml" title="OBGenericData class to connect numeric grids (e.g., orbitals, electrostatic potential) to molecules..." alt="" coords="224,237,328,267"/><area shape="rect" id="node30" href="groupcontrib_8h.shtml" title="Handle group contribution algorithms." alt="" coords="352,237,469,267"/><area shape="rect" id="node32" href="isomorphism_8h.shtml" title="OBIsomorphismMapper class for finding isomorphisms." alt="" coords="592,160,709,189"/><area shape="rect" id="node34" href="align_8h.shtml" title="Perform a least-squares alignment of two molecules or two vectors of vector3 objects." alt="" coords="797,237,861,267"/><area shape="rect" id="node36" href="obmolecformat_8h.shtml" title="Subclass of OBFormat for conversion of OBMol." alt="" coords="3765,160,3901,189"/><area shape="rect" id="node38" href="xml_8h.shtml" title="Declaration of XMLConversion, declaration and definition of XMLBaseFormat and XMLMoleculeFormat." alt="" coords="3804,237,3863,267"/><area shape="rect" id="node40" href="optransform_8h.shtml" title="Operations to change molecules using a datafile of chemical transformations OBChemTsfm." alt="" coords="835,160,949,189"/><area shape="rect" id="node42" href="parsmart_8h.shtml" title="Daylight SMARTS parser." alt="" coords="373,160,467,189"/><area shape="rect" id="node45" href="parsmart_8cpp.shtml" title="Implementation of Daylight SMARTS parser." alt="" coords="493,237,603,267"/><area shape="rect" id="node47" href="pointgroup_8h.shtml" title="Brute-force point group detection." alt="" coords="1221,160,1325,189"/><area shape="rect" id="node49" href="query_8h.shtml" title="OBQuery, OBQueryAtom & OBQueryBond classes." alt="" coords="1349,160,1419,189"/><area shape="rect" id="node51" href="reaction_8h.shtml" title="Handle chemical reactions (i.e., lists of reagents and products)." alt="" coords="1443,160,1533,189"/><area shape="rect" id="node53" href="rotamer_8h.shtml" title="Handle rotamer list data." alt="" coords="1109,160,1197,189"/><area shape="rect" id="node59" href="spectrophore_8h.shtml" title="Class to compute Spectrophores&tm;." alt="" coords="1557,160,1680,189"/><area shape="rect" id="node64" href="bond_8cpp.shtml" title="Handle OBBond class." alt="" coords="1704,160,1787,189"/><area shape="rect" id="node66" href="bondtyper_8cpp.shtml" title="Bond typer to perceive connectivity and bond orders/types." alt="" coords="1811,160,1928,189"/><area shape="rect" id="node69" href="canon_8cpp.shtml" title="Canonical numbering of SMILES, molecules and fragments." alt="" coords="1952,160,2043,189"/><area shape="rect" id="node71" href="chains_8cpp.shtml" title="Parse for macromolecule chains and residues." alt="" coords="2067,160,2157,189"/><area shape="rect" id="node73" href="chargemodel_8cpp.shtml" title="Base class for molecular partial charge models." alt="" coords="2181,160,2317,189"/><area shape="rect" id="node75" href="chiral_8cpp.shtml" title="Detect chiral atoms and molecules." alt="" coords="2019,237,2104,267"/><area shape="rect" id="node77" href="data_8cpp.shtml" title="Global data and resource file parsers." alt="" coords="2341,160,2421,189"/><area shape="rect" id="node81" href="graphsym_8cpp.shtml" title="Handle and perceive graph symmtery for canonical numbering." alt="" coords="2445,160,2560,189"/><area shape="rect" id="node85" href="kekulize_8cpp.shtml" title="Alternate algorithm to kekulize a molecule (OBMol::NewPerceiveKekuleBonds())." alt="" coords="2584,160,2688,189"/><area shape="rect" id="node87" href="mcdlutil_8cpp.shtml" title="2D molecule coordinate generation." alt="" coords="3589,160,3691,189"/><area shape="rect" id="node90" href="molchrg_8cpp.shtml" title="Assign Gasteiger partial charges." alt="" coords="2712,160,2813,189"/><area shape="rect" id="node92" href="obiter_8cpp.shtml" title="STL-style iterators for Open Babel." alt="" coords="2837,160,2925,189"/><area shape="rect" id="node94" href="obutil_8cpp.shtml" title="Various utility methods." alt="" coords="3360,237,3445,267"/><area shape="rect" id="node97" href="patty_8cpp.shtml" title="Programmable atom typer." alt="" coords="3000,160,3085,189"/></map>
</div>
</div>
<p><a href="oberror_8h_source.shtml">Go to the source code of this file.</a></p>
<table class="memberdecls">
<tr><td colspan="2"><h2><a name="nested-classes"></a>
Classes</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBError.shtml">OBError</a></td></tr>
<tr><td class="mdescLeft"> </td><td class="mdescRight">Customizable error handling and logging -- store a message, including the method yielding the error, causes, etc. <a href="classOpenBabel_1_1OBError.shtml#details">More...</a><br/></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml">OBMessageHandler</a></td></tr>
<tr><td class="mdescLeft"> </td><td class="mdescRight">Handle error messages, warnings, debugging information and the like. <a href="classOpenBabel_1_1OBMessageHandler.shtml#details">More...</a><br/></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1obLogBuf.shtml">obLogBuf</a></td></tr>
<tr><td class="mdescLeft"> </td><td class="mdescRight">A minimal streambuf derivative to wrap calls to cerr into calls to <a class="el" href="classOpenBabel_1_1OBMessageHandler.shtml" title="Handle error messages, warnings, debugging information and the like.">OBMessageHandler</a> as needed. <a href="classOpenBabel_1_1obLogBuf.shtml#details">More...</a><br/></td></tr>
<tr><td colspan="2"><h2><a name="namespaces"></a>
Namespaces</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">namespace  </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenBabel.shtml">OpenBabel</a></td></tr>
<tr><td colspan="2"><h2><a name="enum-members"></a>
Enumerations</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9">obMessageLevel</a> { <br/>
  <a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9afbf66ee4ae8ad04bc5003a16aa9b2b77">obError</a>,
<a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9a600e966aac7d34fec05f2067eb6b989b">obWarning</a>,
<a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9a8239e6e8daa5c812be192e6447979814">obInfo</a>,
<a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9afca370a4ce993c0a266c7d120c3a6310">obAuditMsg</a>,
<br/>
  <a class="el" href="namespaceOpenBabel.shtml#acf195409ac7024002db5c178f20862d9afd56eb19b254da4133c9c28f7cccf5ce">obDebug</a>
<br/>
}</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenBabel.shtml#a91e6912277f7537a670952698f7b2d82">errorQualifier</a> { <a class="el" href="namespaceOpenBabel.shtml#a91e6912277f7537a670952698f7b2d82a94bec3e41bc9810307020aaae030baa5">always</a>,
<a class="el" href="namespaceOpenBabel.shtml#a91e6912277f7537a670952698f7b2d82ae7f48063a6bfea08184eda6c5eba743b">onceOnly</a>
}</td></tr>
</table>
<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
<div class="textblock"><p>Handle error messages, warnings, notices, etc. </p>
</div></div>
<!-- window showing the filter options -->
<div id="MSearchSelectWindow"
onmouseover="return searchBox.OnSearchSelectShow()"
onmouseout="return searchBox.OnSearchSelectHide()"
onkeydown="return searchBox.OnSearchSelectKey(event)">
<a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(0)"><span class="SelectionMark"> </span>All</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(1)"><span class="SelectionMark"> </span>Classes</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(2)"><span class="SelectionMark"> </span>Namespaces</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(3)"><span class="SelectionMark"> </span>Files</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(4)"><span class="SelectionMark"> </span>Functions</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(5)"><span class="SelectionMark"> </span>Variables</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(6)"><span class="SelectionMark"> </span>Typedefs</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(7)"><span class="SelectionMark"> </span>Enumerations</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(8)"><span class="SelectionMark"> </span>Enumerator</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(9)"><span class="SelectionMark"> </span>Friends</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(10)"><span class="SelectionMark"> </span>Defines</a></div>
<!-- iframe showing the search results (closed by default) -->
<div id="MSearchResultsWindow">
<iframe src="javascript:void(0)" frameborder="0"
name="MSearchResults" id="MSearchResults">
</iframe>
</div>
</div><!-- end content -->
<!--#include file="footer.html" -->
<div id="footer">
<hr size="1">
<img src="http://openbabel.org/babel256.png" width="136" height="127" alt="" style="float: left;" />
<p>This file is part of the documentation for <a href="http://openbabel.org/wiki/">Open Babel</a>, version 2.3.</p>
<div class="bottom">
Documentation copyright © 1998-2007, the <a href="http://openbabel.org/wiki/THANKS">Open Babel Developers</a>.<br>
Open Babel is hosted by: <a href="http://sourceforge.net">
<img src="http://sourceforge.net/sflogo.php?group_id=40728"
width="88" height="31" border="0" alt="SourceForge Logo"></a><br>
Generated on Thu Oct 13 2011 16:08:08 by <a href="http://www.doxygen.org/"><img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.7.5.1.
</div>
</body>
</html>
|