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<div class="title">typer.h File Reference</div> </div>
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<div class="textblock"><code>#include <openbabel/babelconfig.h></code><br/>
<code>#include <vector></code><br/>
<code>#include <string></code><br/>
<code>#include <<a class="el" href="parsmart_8h_source.shtml">openbabel/parsmart.h</a>></code><br/>
<code>#include <<a class="el" href="data_8h_source.shtml">openbabel/data.h</a>></code><br/>
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This graph shows which files directly or indirectly include this file:</div>
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<div class="center"><img src="typer_8h__dep__incl.png" border="0" usemap="#typer_8hdep" alt=""/></div>
<map name="typer_8hdep" id="typer_8hdep">
<area shape="rect" id="node3" href="mol_8h.shtml" title="Handle molecules. Declarations of OBMol, OBAtom, OBBond, OBResidue. (the main header for Open Babel)..." alt="" coords="1950,160,2009,189"/><area shape="rect" id="node47" href="rotor_8h.shtml" title="Rotate torsional according to rotor rules." alt="" coords="413,315,479,344"/><area shape="rect" id="node120" href="typer_8cpp.shtml" title="Open Babel atom and aromaticity typer." alt="" coords="4370,237,4455,267"/><area shape="rect" id="node123" href="ring_8h.shtml" title="Deal with rings, find smallest set of smallest rings (SSSR)." alt="" coords="3091,83,3150,112"/><area shape="rect" id="node5" href="alias_8h.shtml" title="OBGenericData class to for atom alias data (e.g., in 2D drawing programs for "COOH")" alt="" coords="4007,237,4069,267"/><area shape="rect" id="node7" href="generic_8cpp.shtml" title="Handle OBGenericData classes. 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coords="165,237,258,267"/><area shape="rect" id="node50" href="rotamer_8h.shtml" title="Handle rotamer list data." alt="" coords="301,392,389,421"/><area shape="rect" id="node58" href="rotor_8cpp.shtml" title="Rotate dihedral angles according to rotor rules." alt="" coords="514,392,597,421"/><area shape="rect" id="node61" href="parsmart_8cpp.shtml" title="Implementation of Daylight SMARTS parser." alt="" coords="178,315,287,344"/><area shape="rect" id="node63" href="pointgroup_8h.shtml" title="Brute-force point group detection." alt="" coords="3829,237,3933,267"/><area shape="rect" id="node65" href="pointgroup_8cpp.shtml" title="Brute-force point group detection." alt="" coords="1527,315,1647,344"/><area shape="rect" id="node67" href="query_8h.shtml" title="OBQuery, OBQueryAtom & OBQueryBond classes." alt="" coords="1583,237,1653,267"/><area shape="rect" id="node69" href="reaction_8h.shtml" title="Handle chemical reactions (i.e., lists of reagents and products)." alt="" coords="1677,237,1767,267"/><area shape="rect" id="node72" href="spectrophore_8h.shtml" title="Class to compute Spectrophores&tm;." alt="" coords="1791,237,1914,267"/><area shape="rect" id="node77" href="bond_8cpp.shtml" title="Handle OBBond class." alt="" coords="1938,237,2021,267"/><area shape="rect" id="node79" href="bondtyper_8cpp.shtml" title="Bond typer to perceive connectivity and bond orders/types." alt="" coords="2045,237,2162,267"/><area shape="rect" id="node82" href="canon_8cpp.shtml" title="Canonical numbering of SMILES, molecules and fragments." alt="" coords="2186,237,2277,267"/><area shape="rect" id="node84" href="chains_8cpp.shtml" title="Parse for macromolecule chains and residues." alt="" coords="2301,237,2391,267"/><area shape="rect" id="node86" href="chargemodel_8cpp.shtml" title="Base class for molecular partial charge models." alt="" coords="2415,237,2551,267"/><area shape="rect" id="node88" href="chiral_8cpp.shtml" title="Detect chiral atoms and molecules." alt="" coords="2575,237,2661,267"/><area shape="rect" id="node90" href="data_8cpp.shtml" title="Global data and resource file parsers." alt="" coords="2685,237,2765,267"/><area shape="rect" id="node94" href="graphsym_8cpp.shtml" title="Handle and perceive graph symmtery for canonical numbering." alt="" coords="2789,237,2903,267"/><area shape="rect" id="node98" href="kekulize_8cpp.shtml" title="Alternate algorithm to kekulize a molecule (OBMol::NewPerceiveKekuleBonds())." alt="" coords="4143,237,4247,267"/><area shape="rect" id="node100" href="mcdlutil_8cpp.shtml" title="2D molecule coordinate generation." alt="" coords="2927,237,3029,267"/><area shape="rect" id="node103" href="molchrg_8cpp.shtml" title="Assign Gasteiger partial charges." alt="" coords="3053,237,3154,267"/><area shape="rect" id="node105" href="obiter_8cpp.shtml" title="STL-style iterators for Open Babel." alt="" coords="3178,237,3266,267"/><area shape="rect" id="node107" href="obutil_8cpp.shtml" title="Various utility methods." alt="" coords="3290,237,3375,267"/><area shape="rect" id="node110" href="patty_8cpp.shtml" title="Programmable atom typer." alt="" coords="3399,237,3485,267"/><area shape="rect" id="node112" href="phmodel_8cpp.shtml" title="Read pH rules and assign charges." alt="" coords="3509,237,3615,267"/><area shape="rect" id="node115" href="ring_8cpp.shtml" title="Deal with rings, find smallest set of smallest rings (SSSR)." alt="" coords="4271,237,4346,267"/><area shape="rect" id="node118" href="transform_8cpp.shtml" title="Perform command-line requested transformations for OBMol and SMARTS filtering." alt="" coords="3639,237,3754,267"/></map>
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<p><a href="typer_8h_source.shtml">Go to the source code of this file.</a></p>
<table class="memberdecls">
<tr><td colspan="2"><h2><a name="nested-classes"></a>
Classes</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBAtomTyper.shtml">OBAtomTyper</a></td></tr>
<tr><td class="mdescLeft"> </td><td class="mdescRight">Assigns atom types, hybridization, implicit valence and formal charges. <a href="classOpenBabel_1_1OBAtomTyper.shtml#details">More...</a><br/></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBAromaticTyper.shtml">OBAromaticTyper</a></td></tr>
<tr><td class="mdescLeft"> </td><td class="mdescRight">Assigns aromatic typing to atoms and bonds. <a href="classOpenBabel_1_1OBAromaticTyper.shtml#details">More...</a><br/></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenBabel_1_1OBRingTyper.shtml">OBRingTyper</a></td></tr>
<tr><td class="mdescLeft"> </td><td class="mdescRight">Assigns ring types. <a href="classOpenBabel_1_1OBRingTyper.shtml#details">More...</a><br/></td></tr>
<tr><td colspan="2"><h2><a name="namespaces"></a>
Namespaces</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">namespace  </td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceOpenBabel.shtml">OpenBabel</a></td></tr>
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<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
<div class="textblock"><p>Open Babel atom and aromaticity typer. </p>
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