File: obconversion_readstring.py

package info (click to toggle)
openbabel 2.4.1%2Bdfsg-3
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 58,308 kB
  • sloc: cpp: 459,210; ansic: 90,514; php: 13,963; python: 7,899; perl: 6,518; pascal: 793; sh: 179; xml: 97; ruby: 64; makefile: 46; java: 23; cs: 14
file content (13 lines) | stat: -rw-r--r-- 308 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
import openbabel as ob

# Initialize the OBConversion object
conv = ob.OBConversion()
if not conv.SetInFormat('smi'):
  print 'could not find smiles format'

# Read the smiles string
mol = ob.OBMol()
if not conv.ReadString(mol, 'CCCC'):
  print 'could not read the smiles string'

# ... Use OBMol object ...