File: obconversion_readstring.py

package info (click to toggle)
openbabel 3.1.1%2Bdfsg-9
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 259,620 kB
  • sloc: cpp: 361,957; python: 11,640; ansic: 6,470; perl: 6,010; pascal: 793; php: 529; sh: 226; xml: 97; ruby: 64; makefile: 45; java: 23
file content (14 lines) | stat: -rw-r--r-- 363 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
from __future__ import print_function
from openbabel import openbabel as ob

# Initialize the OBConversion object
conv = ob.OBConversion()
if not conv.SetInFormat('smi'):
  print('could not find smiles format')

# Read the smiles string
mol = ob.OBMol()
if not conv.ReadString(mol, 'CCCC'):
  print('could not read the smiles string')

# ... Use OBMol object ...